RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 LRRC9Q6ZRR7 1453 aa11.86□□□□□ -0.51
NEDD1-201ENST00000266742 DNMBPQ6XZF7 1577 aa11.85□□□□□ -0.51
NEDD1-201ENST00000266742 RAB3GAP2Q9H2M9 1393 aa11.85□□□□□ -0.51
NEDD1-201ENST00000266742 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
NEDD1-201ENST00000266742 SETD5Q9C0A6 1442 aa11.84□□□□□ -0.51
NEDD1-201ENST00000266742 ABCA10Q8WWZ4 1543 aa11.84□□□□□ -0.51
NEDD1-201ENST00000266742 EFCAB5A4FU69 1503 aa11.82□□□□□ -0.52
NEDD1-201ENST00000266742 TOPBP1Q92547 1522 aa11.81□□□□□ -0.52
NEDD1-201ENST00000266742 POLA1P09884 1462 aaPredicted RBP11.8□□□□□ -0.52
NEDD1-201ENST00000266742 TIMELESSQ9UNS1 1208 aa11.8□□□□□ -0.52
NEDD1-201ENST00000266742 FMN1Q68DA7 1419 aa11.8□□□□□ -0.52
NEDD1-201ENST00000266742 RAD54L2Q9Y4B4 1467 aa11.8□□□□□ -0.52
NEDD1-201ENST00000266742 FYCO1Q9BQS8 1478 aa11.79□□□□□ -0.52
NEDD1-201ENST00000266742 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
NEDD1-201ENST00000266742 CUL7Q14999 1698 aa11.79□□□□□ -0.52
NEDD1-201ENST00000266742 CASKIN1Q8WXD9 1431 aa11.78□□□□□ -0.52
NEDD1-201ENST00000266742 AQRO60306 1485 aaKnown RBP eCLIP11.78□□□□□ -0.52
NEDD1-201ENST00000266742 FHOD3Q2V2M9 1422 aa11.78□□□□□ -0.52
NEDD1-201ENST00000266742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.77□□□□□ -0.53
NEDD1-201ENST00000266742 PCF11O94913 1555 aaKnown RBP11.76□□□□□ -0.53
NEDD1-201ENST00000266742 CFAP43Q8NDM7 1665 aa11.75□□□□□ -0.53
NEDD1-201ENST00000266742 PDS5BQ9NTI5 1447 aa11.75□□□□□ -0.53
NEDD1-201ENST00000266742 LAMC3Q9Y6N6 1575 aa11.75□□□□□ -0.53
NEDD1-201ENST00000266742 MTUS2Q5JR59 1369 aa11.74□□□□□ -0.53
NEDD1-201ENST00000266742 NESP48681 1621 aa11.73□□□□□ -0.53
NEDD1-201ENST00000266742 MAPKBP1O60336 1514 aa11.71□□□□□ -0.54
NEDD1-201ENST00000266742 TDRD9Q8NDG6 1382 aaKnown RBP11.7□□□□□ -0.54
NEDD1-201ENST00000266742 GAPVD1Q14C86 1478 aa11.69□□□□□ -0.54
NEDD1-201ENST00000266742 CTTNBP2Q8WZ74 1663 aa11.69□□□□□ -0.54
NEDD1-201ENST00000266742 SIN3AQ96ST3 1273 aa11.68□□□□□ -0.54
NEDD1-201ENST00000266742 FGD6Q6ZV73 1430 aa11.68□□□□□ -0.54
NEDD1-201ENST00000266742 URB2Q14146 1524 aaKnown RBP11.68□□□□□ -0.54
NEDD1-201ENST00000266742 TONSLQ96HA7 1378 aa11.66□□□□□ -0.54
NEDD1-201ENST00000266742 PPP1R15AO75807 674 aaPredicted RBP11.64□□□□□ -0.55
NEDD1-201ENST00000266742 MYT1Q01538 1121 aa11.64□□□□□ -0.55
NEDD1-201ENST00000266742 SNAPC4Q5SXM2 1469 aa11.63□□□□□ -0.55
NEDD1-201ENST00000266742 DDX10Q13206 875 aaKnown RBP11.63□□□□□ -0.55
NEDD1-201ENST00000266742 THOC2Q8NI27 1593 aaKnown RBP11.63□□□□□ -0.55
NEDD1-201ENST00000266742 ABCA5Q8WWZ7 1642 aa11.62□□□□□ -0.55
NEDD1-201ENST00000266742 MYOM3Q5VTT5 1437 aa11.62□□□□□ -0.55
NEDD1-201ENST00000266742 HFM1A2PYH4 1435 aa11.62□□□□□ -0.55
NEDD1-201ENST00000266742 WDR97A6NE52 1622 aa11.62□□□□□ -0.55
NEDD1-201ENST00000266742 CCDC18Q5T9S5 1454 aa11.62□□□□□ -0.55
NEDD1-201ENST00000266742 UACAQ9BZF9 1416 aa11.61□□□□□ -0.55
NEDD1-201ENST00000266742 SAMD9Q5K651 1589 aa11.61□□□□□ -0.55
NEDD1-201ENST00000266742 NCOA2Q15596 1464 aa11.61□□□□□ -0.55
NEDD1-201ENST00000266742 ANP32CO43423 234 aa11.61□□□□□ -0.55
NEDD1-201ENST00000266742 EHBP1L1Q8N3D4 1523 aa11.6□□□□□ -0.55
NEDD1-201ENST00000266742 GRIN2BQ13224 1484 aa11.59□□□□□ -0.55
NEDD1-201ENST00000266742 SUPT6HQ7KZ85 1726 aaKnown RBP11.58□□□□□ -0.56
NEDD1-201ENST00000266742 SUPT16HQ9Y5B9 1047 aaKnown RBP11.57□□□□□ -0.56
NEDD1-201ENST00000266742 CCER2I3L3R5 266 aa11.57□□□□□ -0.56
NEDD1-201ENST00000266742 KIF21AQ7Z4S6 1674 aa11.55□□□□□ -0.56
NEDD1-201ENST00000266742 NAIPQ13075 1403 aa11.55□□□□□ -0.56
NEDD1-201ENST00000266742 TRIM52Q96A61 297 aa11.54□□□□□ -0.56
NEDD1-201ENST00000266742 PTPN23Q9H3S7 1636 aa11.54□□□□□ -0.56
NEDD1-201ENST00000266742 HECW1Q76N89 1606 aa11.53□□□□□ -0.56
NEDD1-201ENST00000266742 NEFLP07196 543 aa11.53□□□□□ -0.56
NEDD1-201ENST00000266742 PTPRKQ15262 1439 aa11.52□□□□□ -0.56
NEDD1-201ENST00000266742 UGGT2Q9NYU1 1516 aa11.52□□□□□ -0.56
NEDD1-201ENST00000266742 CDK11AQ9UQ88 783 aaPredicted RBP11.52□□□□□ -0.57
NEDD1-201ENST00000266742 RRP7BPQ9NSQ0 103 aa11.52□□□□□ -0.57
NEDD1-201ENST00000266742 MIA2Q96PC5 1412 aa11.52□□□□□ -0.57
NEDD1-201ENST00000266742 IQGAP2Q13576 1575 aa11.51□□□□□ -0.57
NEDD1-201ENST00000266742 TARBP1Q13395 1621 aaKnown RBP11.51□□□□□ -0.57
NEDD1-201ENST00000266742 HIRIP3Q9BW71 556 aaPredicted RBP11.51□□□□□ -0.57
NEDD1-201ENST00000266742 CHIC2Q9UKJ5 165 aa11.51□□□□□ -0.57
NEDD1-201ENST00000266742 MRC2Q9UBG0 1479 aa11.5□□□□□ -0.57
NEDD1-201ENST00000266742 AKNAQ7Z591 1439 aa11.5□□□□□ -0.57
NEDD1-201ENST00000266742 KCNH8Q96L42 1107 aa11.5□□□□□ -0.57
NEDD1-201ENST00000266742 TCOF1Q13428 1488 aaKnown RBP11.49□□□□□ -0.57
NEDD1-201ENST00000266742 EPRSP07814 1512 aaKnown RBP11.49□□□□□ -0.57
NEDD1-201ENST00000266742 ARHGEF11O15085 1522 aa11.48□□□□□ -0.57
NEDD1-201ENST00000266742 ADAMTS12P58397 1594 aa11.46□□□□□ -0.57
NEDD1-201ENST00000266742 IFT140Q96RY7 1462 aa11.46□□□□□ -0.57
NEDD1-201ENST00000266742 DNAJC5BQ9UF47 199 aa11.46□□□□□ -0.57
NEDD1-201ENST00000266742 PBRM1Q86U86 1689 aa11.46□□□□□ -0.57
NEDD1-201ENST00000266742 EIF4G2P78344 907 aaKnown RBP eCLIP11.45□□□□□ -0.58
NEDD1-201ENST00000266742 MPHOSPH9Q99550 1183 aa11.45□□□□□ -0.58
NEDD1-201ENST00000266742 LRRIQ1Q96JM4 1722 aa11.45□□□□□ -0.58
NEDD1-201ENST00000266742 ARID3CA6NKF2 412 aa11.44□□□□□ -0.58
NEDD1-201ENST00000266742 MAGI3Q5TCQ9 1506 aa11.44□□□□□ -0.58
NEDD1-201ENST00000266742 KIAA0586Q9BVV6 1533 aa11.43□□□□□ -0.58
NEDD1-201ENST00000266742 FKBP8Q14318 412 aa11.43□□□□□ -0.58
NEDD1-201ENST00000266742 ROCK1Q13464 1354 aa11.42□□□□□ -0.58
NEDD1-201ENST00000266742 WDR62O43379 1518 aa11.42□□□□□ -0.58
NEDD1-201ENST00000266742 CDK13Q14004 1512 aaKnown RBP11.41□□□□□ -0.58
NEDD1-201ENST00000266742 GCC2Q8IWJ2 1684 aa11.41□□□□□ -0.58
NEDD1-201ENST00000266742 HSPA5P11021 654 aaKnown RBP11.4□□□□□ -0.58
NEDD1-201ENST00000266742 CHMP7Q8WUX9 453 aaPredicted RBP11.38□□□□□ -0.59
NEDD1-201ENST00000266742 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
NEDD1-201ENST00000266742 DAPK1P53355 1430 aa11.38□□□□□ -0.59
NEDD1-201ENST00000266742 L3MBTL2Q969R5 705 aa11.38□□□□□ -0.59
NEDD1-201ENST00000266742 BCANQ96GW7 911 aa11.38□□□□□ -0.59
NEDD1-201ENST00000266742 CFDP1Q9UEE9 299 aaPredicted RBP11.37□□□□□ -0.59
NEDD1-201ENST00000266742 KIAA0556O60303 1618 aa11.36□□□□□ -0.59
NEDD1-201ENST00000266742 GRIN2AQ12879 1464 aa11.36□□□□□ -0.59
NEDD1-201ENST00000266742 ZNF608Q9ULD9 1512 aaPredicted RBP11.36□□□□□ -0.59
NEDD1-201ENST00000266742 HNRNPUQ00839 825 aaKnown RBP eCLIP11.36□□□□□ -0.59
NEDD1-201ENST00000266742 CARMIL2Q6F5E8 1435 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms