RNA–Protein interactions for RNA: ENST00000266542.8

C1RL-201, Transcript of complement C1r subcomponent like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1RL, Length 3,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-201ENST00000266542 PPP1R15AO75807 674 aaPredicted RBP18.6■□□□□ 0.57
C1RL-201ENST00000266542 IGF1RP08069 1367 aa18.6■□□□□ 0.57
C1RL-201ENST00000266542 ITGAEP38570 1179 aa18.57■□□□□ 0.56
C1RL-201ENST00000266542 CCER2I3L3R5 266 aa18.56■□□□□ 0.56
C1RL-201ENST00000266542 PHLDB1Q86UU1 1377 aa18.56■□□□□ 0.56
C1RL-201ENST00000266542 PRDM2Q13029 1718 aa18.55■□□□□ 0.56
C1RL-201ENST00000266542 CFAP43Q8NDM7 1665 aa18.54■□□□□ 0.56
C1RL-201ENST00000266542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.53■□□□□ 0.56
C1RL-201ENST00000266542 DDX10Q13206 875 aaKnown RBP18.53■□□□□ 0.56
C1RL-201ENST00000266542 FHAD1B1AJZ9 1412 aa18.53■□□□□ 0.56
C1RL-201ENST00000266542 FKBP8Q14318 412 aa18.51■□□□□ 0.55
C1RL-201ENST00000266542 CARMIL1Q5VZK9 1371 aa18.49■□□□□ 0.55
C1RL-201ENST00000266542 SIN3AQ96ST3 1273 aa18.49■□□□□ 0.55
C1RL-201ENST00000266542 PCF11O94913 1555 aaKnown RBP18.43■□□□□ 0.54
C1RL-201ENST00000266542 NEFLP07196 543 aa18.42■□□□□ 0.54
C1RL-201ENST00000266542 BCANQ96GW7 911 aa18.42■□□□□ 0.54
C1RL-201ENST00000266542 AQRO60306 1485 aaKnown RBP eCLIP18.41■□□□□ 0.54
C1RL-201ENST00000266542 ANP32CO43423 234 aa18.41■□□□□ 0.54
C1RL-201ENST00000266542 FAM50AQ14320 339 aaKnown RBP18.41■□□□□ 0.54
C1RL-201ENST00000266542 FYCO1Q9BQS8 1478 aa18.4■□□□□ 0.54
C1RL-201ENST00000266542 RBM19Q9Y4C8 960 aaKnown RBP18.4■□□□□ 0.54
C1RL-201ENST00000266542 FGD5Q6ZNL6 1462 aa18.39■□□□□ 0.54
C1RL-201ENST00000266542 EFCAB5A4FU69 1503 aa18.37■□□□□ 0.53
C1RL-201ENST00000266542 CASKIN1Q8WXD9 1431 aa18.37■□□□□ 0.53
C1RL-201ENST00000266542 CADPSQ9ULU8 1353 aa18.35■□□□□ 0.53
C1RL-201ENST00000266542 TRIM52Q96A61 297 aa18.31■□□□□ 0.52
C1RL-201ENST00000266542 UACAQ9BZF9 1416 aa18.31■□□□□ 0.52
C1RL-201ENST00000266542 HFM1A2PYH4 1435 aa18.3■□□□□ 0.52
C1RL-201ENST00000266542 FGD6Q6ZV73 1430 aa18.3■□□□□ 0.52
C1RL-201ENST00000266542 TONSLQ96HA7 1378 aa18.29■□□□□ 0.52
C1RL-201ENST00000266542 CCDC18Q5T9S5 1454 aa18.28■□□□□ 0.52
C1RL-201ENST00000266542 FHOD3Q2V2M9 1422 aa18.27■□□□□ 0.52
C1RL-201ENST00000266542 HIRIP3Q9BW71 556 aaPredicted RBP18.27■□□□□ 0.51
C1RL-201ENST00000266542 BCL11AQ9H165 835 aa18.26■□□□□ 0.51
C1RL-201ENST00000266542 PTPN23Q9H3S7 1636 aa18.25■□□□□ 0.51
C1RL-201ENST00000266542 KDM5BQ9UGL1 1544 aa18.25■□□□□ 0.51
C1RL-201ENST00000266542 CC2D2AQ9P2K1 1620 aa18.24■□□□□ 0.51
C1RL-201ENST00000266542 ABCA10Q8WWZ4 1543 aa18.24■□□□□ 0.51
C1RL-201ENST00000266542 FMN1Q68DA7 1419 aa18.24■□□□□ 0.51
C1RL-201ENST00000266542 FANCIQ9NVI1 1328 aa18.22■□□□□ 0.51
C1RL-201ENST00000266542 PTPRKQ15262 1439 aa18.22■□□□□ 0.51
C1RL-201ENST00000266542 SNAPC4Q5SXM2 1469 aa18.22■□□□□ 0.51
C1RL-201ENST00000266542 CUL7Q14999 1698 aa18.22■□□□□ 0.51
C1RL-201ENST00000266542 ERICH6BQ5W0A0 696 aa18.22■□□□□ 0.51
C1RL-201ENST00000266542 P3H3Q8IVL6 736 aa18.21■□□□□ 0.51
C1RL-201ENST00000266542 CTTNBP2Q8WZ74 1663 aa18.21■□□□□ 0.51
C1RL-201ENST00000266542 NAIPQ13075 1403 aa18.2■□□□□ 0.5
C1RL-201ENST00000266542 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
C1RL-201ENST00000266542 MSH5O43196 834 aa18.17■□□□□ 0.5
C1RL-201ENST00000266542 ATP1B4Q9UN42 357 aaPredicted RBP18.16■□□□□ 0.5
C1RL-201ENST00000266542 MYOM3Q5VTT5 1437 aa18.14■□□□□ 0.5
C1RL-201ENST00000266542 THOC2Q8NI27 1593 aaKnown RBP18.14■□□□□ 0.5
C1RL-201ENST00000266542 FANCD2Q9BXW9 1451 aa18.14■□□□□ 0.49
C1RL-201ENST00000266542 NCOA2Q15596 1464 aa18.13■□□□□ 0.49
C1RL-201ENST00000266542 SAMD9Q5K651 1589 aa18.13■□□□□ 0.49
C1RL-201ENST00000266542 MTUS2Q5JR59 1369 aa18.13■□□□□ 0.49
C1RL-201ENST00000266542 HNRNPUQ00839 825 aaKnown RBP eCLIP18.12■□□□□ 0.49
C1RL-201ENST00000266542 CDK11AQ9UQ88 783 aaPredicted RBP18.12■□□□□ 0.49
C1RL-201ENST00000266542 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
C1RL-201ENST00000266542 RAD54L2Q9Y4B4 1467 aa18.11■□□□□ 0.49
C1RL-201ENST00000266542 GRIN2BQ13224 1484 aa18.1■□□□□ 0.49
C1RL-201ENST00000266542 ARHGEF11O15085 1522 aa18.1■□□□□ 0.49
C1RL-201ENST00000266542 LRRIQ1Q96JM4 1722 aa18.1■□□□□ 0.49
C1RL-201ENST00000266542 WASHC2AQ641Q2 1341 aa18.1■□□□□ 0.49
C1RL-201ENST00000266542 TOPBP1Q92547 1522 aa18.09■□□□□ 0.49
C1RL-201ENST00000266542 SUPT6HQ7KZ85 1726 aaKnown RBP18.09■□□□□ 0.49
C1RL-201ENST00000266542 EHBP1L1Q8N3D4 1523 aa18.08■□□□□ 0.49
C1RL-201ENST00000266542 AKNAQ7Z591 1439 aa18.08■□□□□ 0.48
C1RL-201ENST00000266542 HECW1Q76N89 1606 aa18.07■□□□□ 0.48
C1RL-201ENST00000266542 TCOF1Q13428 1488 aaKnown RBP18.06■□□□□ 0.48
C1RL-201ENST00000266542 UGGT2Q9NYU1 1516 aa18.06■□□□□ 0.48
C1RL-201ENST00000266542 GCC2Q8IWJ2 1684 aa18.06■□□□□ 0.48
C1RL-201ENST00000266542 DENND4BO75064 1496 aaPredicted RBP18.06■□□□□ 0.48
C1RL-201ENST00000266542 HSPA5P11021 654 aaKnown RBP18.06■□□□□ 0.48
C1RL-201ENST00000266542 PPP4R2Q9NY27 417 aa18.05■□□□□ 0.48
C1RL-201ENST00000266542 CNTLNQ9NXG0 1405 aa18.05■□□□□ 0.48
C1RL-201ENST00000266542 EIF4G2P78344 907 aaKnown RBP eCLIP18.01■□□□□ 0.47
C1RL-201ENST00000266542 KIF21AQ7Z4S6 1674 aa18.01■□□□□ 0.47
C1RL-201ENST00000266542 NCOA1Q15788 1441 aa18■□□□□ 0.47
C1RL-201ENST00000266542 MYT1LQ9UL68 1186 aa17.99■□□□□ 0.47
C1RL-201ENST00000266542 ZBED9Q6R2W3 1325 aa17.97■□□□□ 0.47
C1RL-201ENST00000266542 IRX6P78412 446 aaPredicted RBP17.97■□□□□ 0.47
C1RL-201ENST00000266542 ABCA5Q8WWZ7 1642 aa17.97■□□□□ 0.47
C1RL-201ENST00000266542 PRKRIP1Q9H875 184 aaPredicted RBP17.96■□□□□ 0.47
C1RL-201ENST00000266542 CCDC7Q96M83 1385 aa17.96■□□□□ 0.47
C1RL-201ENST00000266542 MAGI3Q5TCQ9 1506 aa17.96■□□□□ 0.46
C1RL-201ENST00000266542 CCDC184Q52MB2 194 aa17.94■□□□□ 0.46
C1RL-201ENST00000266542 MIA2Q96PC5 1412 aa17.93■□□□□ 0.46
C1RL-201ENST00000266542 ERICH6Q7L0X2 663 aa17.92■□□□□ 0.46
C1RL-201ENST00000266542 KDM6BO15054 1643 aa17.92■□□□□ 0.46
C1RL-201ENST00000266542 MPHOSPH9Q99550 1183 aa17.91■□□□□ 0.46
C1RL-201ENST00000266542 POLR1AO95602 1720 aaPredicted RBP17.91■□□□□ 0.46
C1RL-201ENST00000266542 C11orf95C9JLR9 678 aaPredicted RBP17.9■□□□□ 0.46
C1RL-201ENST00000266542 L3MBTL2Q969R5 705 aa17.9■□□□□ 0.46
C1RL-201ENST00000266542 RRP7BPQ9NSQ0 103 aa17.9■□□□□ 0.46
C1RL-201ENST00000266542 SPATA31E1Q6ZUB1 1445 aa17.9■□□□□ 0.46
C1RL-201ENST00000266542 RPRD2Q5VT52 1461 aaKnown RBP17.89■□□□□ 0.45
C1RL-201ENST00000266542 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
C1RL-201ENST00000266542 URB2Q14146 1524 aaKnown RBP17.87■□□□□ 0.45
C1RL-201ENST00000266542 ANKRD30BQ9BXX2 1392 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms