RNA–Protein interactions for RNA: ENST00000265007.10

SOX30-201, Transcript of SRY-box 30, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SOX30, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-201ENST00000265007 DHX57Q6P158 1386 aaKnown RBP17.75■□□□□ 0.43
SOX30-201ENST00000265007 IRX6P78412 446 aaPredicted RBP17.73■□□□□ 0.43
SOX30-201ENST00000265007 FGD5Q6ZNL6 1462 aa17.73■□□□□ 0.43
SOX30-201ENST00000265007 HIRIP3Q9BW71 556 aaPredicted RBP17.72■□□□□ 0.43
SOX30-201ENST00000265007 FANCD2Q9BXW9 1451 aa17.72■□□□□ 0.43
SOX30-201ENST00000265007 PRDM2Q13029 1718 aa17.71■□□□□ 0.43
SOX30-201ENST00000265007 ERICH3Q5RHP9 1530 aa17.7■□□□□ 0.42
SOX30-201ENST00000265007 IGF1RP08069 1367 aa17.7■□□□□ 0.42
SOX30-201ENST00000265007 KANK4Q5T7N3 995 aaPredicted RBP17.69■□□□□ 0.42
SOX30-201ENST00000265007 ARAP1Q96P48 1450 aa17.67■□□□□ 0.42
SOX30-201ENST00000265007 P3H3Q8IVL6 736 aa17.66■□□□□ 0.42
SOX30-201ENST00000265007 RAD54L2Q9Y4B4 1467 aa17.66■□□□□ 0.42
SOX30-201ENST00000265007 CARMIL1Q5VZK9 1371 aa17.63■□□□□ 0.41
SOX30-201ENST00000265007 CDK11AQ9UQ88 783 aaPredicted RBP17.62■□□□□ 0.41
SOX30-201ENST00000265007 DEKP35659 375 aaKnown RBP17.6■□□□□ 0.41
SOX30-201ENST00000265007 ATP1B4Q9UN42 357 aaPredicted RBP17.6■□□□□ 0.41
SOX30-201ENST00000265007 ARHGAP35Q9NRY4 1499 aa17.58■□□□□ 0.41
SOX30-201ENST00000265007 NBR1Q14596 966 aa17.58■□□□□ 0.4
SOX30-201ENST00000265007 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
SOX30-201ENST00000265007 POLA1P09884 1462 aaPredicted RBP17.54■□□□□ 0.4
SOX30-201ENST00000265007 ANP32CO43423 234 aa17.53■□□□□ 0.4
SOX30-201ENST00000265007 ANO8Q9HCE9 1232 aaPredicted RBP17.53■□□□□ 0.4
SOX30-201ENST00000265007 SIN3AQ96ST3 1273 aa17.52■□□□□ 0.39
SOX30-201ENST00000265007 DNMBPQ6XZF7 1577 aa17.51■□□□□ 0.39
SOX30-201ENST00000265007 TDRD9Q8NDG6 1382 aaKnown RBP17.5■□□□□ 0.39
SOX30-201ENST00000265007 FANCIQ9NVI1 1328 aa17.49■□□□□ 0.39
SOX30-201ENST00000265007 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
SOX30-201ENST00000265007 HNRNPUQ00839 825 aaKnown RBP eCLIP17.47■□□□□ 0.39
SOX30-201ENST00000265007 ABCA10Q8WWZ4 1543 aa17.43■□□□□ 0.38
SOX30-201ENST00000265007 LAMC3Q9Y6N6 1575 aa17.42■□□□□ 0.38
SOX30-201ENST00000265007 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
SOX30-201ENST00000265007 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
SOX30-201ENST00000265007 FHOD3Q2V2M9 1422 aa17.4■□□□□ 0.38
SOX30-201ENST00000265007 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
SOX30-201ENST00000265007 RTN4Q9NQC3 1192 aaKnown RBP17.39■□□□□ 0.37
SOX30-201ENST00000265007 KIF21AQ7Z4S6 1674 aa17.37■□□□□ 0.37
SOX30-201ENST00000265007 B4GALNT3Q6L9W6 998 aa17.37■□□□□ 0.37
SOX30-201ENST00000265007 SALL2Q9Y467 1007 aaPredicted RBP17.36■□□□□ 0.37
SOX30-201ENST00000265007 RAB3GAP2Q9H2M9 1393 aa17.35■□□□□ 0.37
SOX30-201ENST00000265007 CCER2I3L3R5 266 aa17.35■□□□□ 0.37
SOX30-201ENST00000265007 CCNB3Q8WWL7 1395 aa17.34■□□□□ 0.37
SOX30-201ENST00000265007 FAM50AQ14320 339 aaKnown RBP17.34■□□□□ 0.37
SOX30-201ENST00000265007 MYT1LQ9UL68 1186 aa17.33■□□□□ 0.37
SOX30-201ENST00000265007 PAK3O75914 559 aaPredicted RBP17.32■□□□□ 0.36
SOX30-201ENST00000265007 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
SOX30-201ENST00000265007 NOP58Q9Y2X3 529 aaKnown RBP17.31■□□□□ 0.36
SOX30-201ENST00000265007 WDR97A6NE52 1622 aa17.31■□□□□ 0.36
SOX30-201ENST00000265007 RRBP1Q9P2E9 1410 aaKnown RBP17.3■□□□□ 0.36
SOX30-201ENST00000265007 TIAM1Q13009 1591 aa17.29■□□□□ 0.36
SOX30-201ENST00000265007 PCF11O94913 1555 aaKnown RBP17.28■□□□□ 0.36
SOX30-201ENST00000265007 RTL5Q5HYW3 569 aaPredicted RBP17.27■□□□□ 0.36
SOX30-201ENST00000265007 PHLDB1Q86UU1 1377 aa17.27■□□□□ 0.36
SOX30-201ENST00000265007 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.27■□□□□ 0.36
SOX30-201ENST00000265007 FHAD1B1AJZ9 1412 aa17.27■□□□□ 0.35
SOX30-201ENST00000265007 LRRC9Q6ZRR7 1453 aa17.26■□□□□ 0.35
SOX30-201ENST00000265007 AQRO60306 1485 aaKnown RBP eCLIP17.26■□□□□ 0.35
SOX30-201ENST00000265007 PPP4R2Q9NY27 417 aa17.25■□□□□ 0.35
SOX30-201ENST00000265007 CUL7Q14999 1698 aa17.25■□□□□ 0.35
SOX30-201ENST00000265007 IL27Q8NEV9 243 aa17.24■□□□□ 0.35
SOX30-201ENST00000265007 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
SOX30-201ENST00000265007 ABCA5Q8WWZ7 1642 aa17.22■□□□□ 0.35
SOX30-201ENST00000265007 CNGB1Q14028 1251 aaPredicted RBP17.22■□□□□ 0.35
SOX30-201ENST00000265007 MAPKBP1O60336 1514 aa17.21■□□□□ 0.35
SOX30-201ENST00000265007 CTTNBP2Q8WZ74 1663 aa17.21■□□□□ 0.35
SOX30-201ENST00000265007 FAM9BQ8IZU0 186 aa17.21■□□□□ 0.35
SOX30-201ENST00000265007 SENP3-EIF4A1A0A087X0R7 540 aa17.18■□□□□ 0.34
SOX30-201ENST00000265007 TARBP1Q13395 1621 aaKnown RBP17.17■□□□□ 0.34
SOX30-201ENST00000265007 CASKIN1Q8WXD9 1431 aa17.15■□□□□ 0.34
SOX30-201ENST00000265007 SETD5Q9C0A6 1442 aa17.15■□□□□ 0.34
SOX30-201ENST00000265007 EFCAB5A4FU69 1503 aa17.14■□□□□ 0.33
SOX30-201ENST00000265007 MAP3K1Q13233 1512 aa17.14■□□□□ 0.33
SOX30-201ENST00000265007 ANP32AP39687 249 aaKnown RBP17.14■□□□□ 0.33
SOX30-201ENST00000265007 NPM2Q86SE8 214 aaKnown RBP17.13■□□□□ 0.33
SOX30-201ENST00000265007 FYCO1Q9BQS8 1478 aa17.13■□□□□ 0.33
SOX30-201ENST00000265007 ZNF608Q9ULD9 1512 aaPredicted RBP17.13■□□□□ 0.33
SOX30-201ENST00000265007 ZBTB47Q9UFB7 747 aaPredicted RBP17.13■□□□□ 0.33
SOX30-201ENST00000265007 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
SOX30-201ENST00000265007 CCDC184Q52MB2 194 aa17.13■□□□□ 0.33
SOX30-201ENST00000265007 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
SOX30-201ENST00000265007 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
SOX30-201ENST00000265007 TONSLQ96HA7 1378 aa17.12■□□□□ 0.33
SOX30-201ENST00000265007 CFAP43Q8NDM7 1665 aa17.11■□□□□ 0.33
SOX30-201ENST00000265007 SNAPC4Q5SXM2 1469 aa17.08■□□□□ 0.33
SOX30-201ENST00000265007 FBLN2P98095 1184 aa17.08■□□□□ 0.32
SOX30-201ENST00000265007 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
SOX30-201ENST00000265007 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
SOX30-201ENST00000265007 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
SOX30-201ENST00000265007 IPO9Q96P70 1041 aaKnown RBP17.05■□□□□ 0.32
SOX30-201ENST00000265007 EIF5BO60841 1220 aaKnown RBP17.04■□□□□ 0.32
SOX30-201ENST00000265007 ERICH6BQ5W0A0 696 aa17.04■□□□□ 0.32
SOX30-201ENST00000265007 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
SOX30-201ENST00000265007 LRRIQ1Q96JM4 1722 aa17.04■□□□□ 0.32
SOX30-201ENST00000265007 SAMD9Q5K651 1589 aa17.04■□□□□ 0.32
SOX30-201ENST00000265007 GRIN2BQ13224 1484 aa17.01■□□□□ 0.31
SOX30-201ENST00000265007 CHIC2Q9UKJ5 165 aa17■□□□□ 0.31
SOX30-201ENST00000265007 FGD6Q6ZV73 1430 aa17■□□□□ 0.31
SOX30-201ENST00000265007 NEFMP07197 916 aa16.99■□□□□ 0.31
SOX30-201ENST00000265007 TIMELESSQ9UNS1 1208 aa16.99■□□□□ 0.31
SOX30-201ENST00000265007 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
SOX30-201ENST00000265007 IQGAP2Q13576 1575 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms