RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 KIF21BO75037 1637 aa21.8■■□□□ 1.08
TIMP2-201ENST00000262768 ARAP1Q96P48 1450 aa21.79■■□□□ 1.08
TIMP2-201ENST00000262768 CCNB3Q8WWL7 1395 aa21.77■■□□□ 1.08
TIMP2-201ENST00000262768 PDS5BQ9NTI5 1447 aa21.76■■□□□ 1.07
TIMP2-201ENST00000262768 GTF3C3Q9Y5Q9 886 aa21.74■■□□□ 1.07
TIMP2-201ENST00000262768 ERCC6Q03468 1493 aa21.74■■□□□ 1.07
TIMP2-201ENST00000262768 ZNF326Q5BKZ1 582 aaKnown RBP21.74■■□□□ 1.07
TIMP2-201ENST00000262768 PRXQ9BXM0 1461 aa21.73■■□□□ 1.07
TIMP2-201ENST00000262768 MYT1LQ9UL68 1186 aa21.71■■□□□ 1.07
TIMP2-201ENST00000262768 DDX10Q13206 875 aaKnown RBP21.66■■□□□ 1.06
TIMP2-201ENST00000262768 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.06
TIMP2-201ENST00000262768 ARHGAP35Q9NRY4 1499 aa21.64■■□□□ 1.06
TIMP2-201ENST00000262768 SCAF1Q9H7N4 1312 aaKnown RBP21.63■■□□□ 1.05
TIMP2-201ENST00000262768 ACIN1Q9UKV3 1341 aaKnown RBP21.62■■□□□ 1.05
TIMP2-201ENST00000262768 POLA1P09884 1462 aaPredicted RBP21.62■■□□□ 1.05
TIMP2-201ENST00000262768 TOPBP1Q92547 1522 aa21.59■■□□□ 1.05
TIMP2-201ENST00000262768 FHAD1B1AJZ9 1412 aa21.57■■□□□ 1.04
TIMP2-201ENST00000262768 RAB3GAP2Q9H2M9 1393 aa21.57■■□□□ 1.04
TIMP2-201ENST00000262768 FOXD1Q16676 465 aa21.55■■□□□ 1.04
TIMP2-201ENST00000262768 GAPVD1Q14C86 1478 aa21.54■■□□□ 1.04
TIMP2-201ENST00000262768 CDK11AQ9UQ88 783 aaPredicted RBP21.53■■□□□ 1.04
TIMP2-201ENST00000262768 PHLDB1Q86UU1 1377 aa21.52■■□□□ 1.03
TIMP2-201ENST00000262768 KCNH8Q96L42 1107 aa21.5■■□□□ 1.03
TIMP2-201ENST00000262768 TONSLQ96HA7 1378 aa21.5■■□□□ 1.03
TIMP2-201ENST00000262768 DHX57Q6P158 1386 aaKnown RBP21.48■■□□□ 1.03
TIMP2-201ENST00000262768 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
TIMP2-201ENST00000262768 BIVM-ERCC5R4GMW8 1640 aa21.44■■□□□ 1.02
TIMP2-201ENST00000262768 BCANQ96GW7 911 aa21.41■■□□□ 1.02
TIMP2-201ENST00000262768 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
TIMP2-201ENST00000262768 CFDP1Q9UEE9 299 aaPredicted RBP21.41■■□□□ 1.02
TIMP2-201ENST00000262768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.41■■□□□ 1.02
TIMP2-201ENST00000262768 SETD5Q9C0A6 1442 aa21.4■■□□□ 1.02
TIMP2-201ENST00000262768 FMN1Q68DA7 1419 aa21.38■■□□□ 1.01
TIMP2-201ENST00000262768 SLC4A1APQ9BWU0 796 aaKnown RBP21.37■■□□□ 1.01
TIMP2-201ENST00000262768 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
TIMP2-201ENST00000262768 PLEKHD1A6NEE1 506 aa21.35■■□□□ 1.01
TIMP2-201ENST00000262768 ZNF644Q9H582 1327 aaPredicted RBP21.35■■□□□ 1.01
TIMP2-201ENST00000262768 DNMBPQ6XZF7 1577 aa21.34■■□□□ 1.01
TIMP2-201ENST00000262768 KDM2AQ9Y2K7 1162 aa21.34■■□□□ 1.01
TIMP2-201ENST00000262768 JPH4Q96JJ6 628 aa21.33■■□□□ 1.01
TIMP2-201ENST00000262768 LRRC9Q6ZRR7 1453 aa21.32■■□□□ 1
TIMP2-201ENST00000262768 ANP32CO43423 234 aa21.32■■□□□ 1
TIMP2-201ENST00000262768 ABCA10Q8WWZ4 1543 aa21.28■■□□□ 1
TIMP2-201ENST00000262768 TSPY4P0CV99 314 aa21.25■□□□□ 0.99
TIMP2-201ENST00000262768 TSPY10P0CW01 314 aa21.25■□□□□ 0.99
TIMP2-201ENST00000262768 ZNF608Q9ULD9 1512 aaPredicted RBP21.25■□□□□ 0.99
TIMP2-201ENST00000262768 SENP3Q9H4L4 574 aaPredicted RBP21.23■□□□□ 0.99
TIMP2-201ENST00000262768 CLSPNQ9HAW4 1339 aa21.21■□□□□ 0.99
TIMP2-201ENST00000262768 RGL3Q3MIN7 710 aa21.2■□□□□ 0.99
TIMP2-201ENST00000262768 RRBP1Q9P2E9 1410 aaKnown RBP21.2■□□□□ 0.98
TIMP2-201ENST00000262768 NEFLP07196 543 aa21.18■□□□□ 0.98
TIMP2-201ENST00000262768 LAMC3Q9Y6N6 1575 aa21.17■□□□□ 0.98
TIMP2-201ENST00000262768 CASKIN1Q8WXD9 1431 aa21.15■□□□□ 0.98
TIMP2-201ENST00000262768 PCF11O94913 1555 aaKnown RBP21.15■□□□□ 0.98
TIMP2-201ENST00000262768 TIAM1Q13009 1591 aa21.15■□□□□ 0.98
TIMP2-201ENST00000262768 HNRNPMP52272 730 aaKnown RBP eCLIP21.14■□□□□ 0.98
TIMP2-201ENST00000262768 MRC2Q9UBG0 1479 aa21.14■□□□□ 0.97
TIMP2-201ENST00000262768 FGD6Q6ZV73 1430 aa21.14■□□□□ 0.97
TIMP2-201ENST00000262768 MPHOSPH9Q99550 1183 aa21.14■□□□□ 0.97
TIMP2-201ENST00000262768 PPP1R15AO75807 674 aaPredicted RBP21.12■□□□□ 0.97
TIMP2-201ENST00000262768 FAM9BQ8IZU0 186 aa21.1■□□□□ 0.97
TIMP2-201ENST00000262768 GRIN2BQ13224 1484 aa21.1■□□□□ 0.97
TIMP2-201ENST00000262768 NCOA2Q15596 1464 aa21.09■□□□□ 0.97
TIMP2-201ENST00000262768 PELP1Q8IZL8 1130 aaKnown RBP21.09■□□□□ 0.97
TIMP2-201ENST00000262768 SNAPC4Q5SXM2 1469 aa21.09■□□□□ 0.97
TIMP2-201ENST00000262768 CDK13Q14004 1512 aaKnown RBP21.06■□□□□ 0.96
TIMP2-201ENST00000262768 EIF4G2P78344 907 aaKnown RBP eCLIP21.06■□□□□ 0.96
TIMP2-201ENST00000262768 HNRNPUQ00839 825 aaKnown RBP eCLIP21.05■□□□□ 0.96
TIMP2-201ENST00000262768 L3MBTL2Q969R5 705 aa21.05■□□□□ 0.96
TIMP2-201ENST00000262768 PKD2Q13563 968 aa21.04■□□□□ 0.96
TIMP2-201ENST00000262768 PRDM2Q13029 1718 aa21.03■□□□□ 0.96
TIMP2-201ENST00000262768 FYCO1Q9BQS8 1478 aa21.03■□□□□ 0.96
TIMP2-201ENST00000262768 CARMIL2Q6F5E8 1435 aa21.02■□□□□ 0.96
TIMP2-201ENST00000262768 CCDC18Q5T9S5 1454 aa21.02■□□□□ 0.96
TIMP2-201ENST00000262768 MYOM3Q5VTT5 1437 aa21.02■□□□□ 0.96
TIMP2-201ENST00000262768 KIF21AQ7Z4S6 1674 aa21.01■□□□□ 0.95
TIMP2-201ENST00000262768 IRX6P78412 446 aaPredicted RBP21.01■□□□□ 0.95
TIMP2-201ENST00000262768 SALL2Q9Y467 1007 aaPredicted RBP21.01■□□□□ 0.95
TIMP2-201ENST00000262768 HSPA5P11021 654 aaKnown RBP21■□□□□ 0.95
TIMP2-201ENST00000262768 CHGAP10645 457 aaKnown RBP20.99■□□□□ 0.95
TIMP2-201ENST00000262768 FKBP8Q14318 412 aa20.98■□□□□ 0.95
TIMP2-201ENST00000262768 PRG4Q92954 1404 aaPredicted RBP20.98■□□□□ 0.95
TIMP2-201ENST00000262768 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
TIMP2-201ENST00000262768 DCAF11Q8TEB1 546 aa20.93■□□□□ 0.94
TIMP2-201ENST00000262768 EFCAB5A4FU69 1503 aa20.92■□□□□ 0.94
TIMP2-201ENST00000262768 PTPRGP23470 1445 aa20.92■□□□□ 0.94
TIMP2-201ENST00000262768 PTPRKQ15262 1439 aa20.92■□□□□ 0.94
TIMP2-201ENST00000262768 PLB1Q6P1J6 1458 aa20.91■□□□□ 0.94
TIMP2-201ENST00000262768 NPM1P06748 294 aaKnown RBP eCLIP20.91■□□□□ 0.94
TIMP2-201ENST00000262768 NUP155O75694 1391 aa20.9■□□□□ 0.94
TIMP2-201ENST00000262768 MRS2Q9HD23 443 aa20.9■□□□□ 0.94
TIMP2-201ENST00000262768 CUL7Q14999 1698 aa20.88■□□□□ 0.93
TIMP2-201ENST00000262768 EPRSP07814 1512 aaKnown RBP20.87■□□□□ 0.93
TIMP2-201ENST00000262768 CARD11Q9BXL7 1154 aa20.86■□□□□ 0.93
TIMP2-201ENST00000262768 IQGAP2Q13576 1575 aa20.86■□□□□ 0.93
TIMP2-201ENST00000262768 WDR97A6NE52 1622 aa20.82■□□□□ 0.92
TIMP2-201ENST00000262768 PLPPR3Q6T4P5 718 aa20.81■□□□□ 0.92
TIMP2-201ENST00000262768 NAIPQ13075 1403 aa20.81■□□□□ 0.92
TIMP2-201ENST00000262768 TIMELESSQ9UNS1 1208 aa20.81■□□□□ 0.92
TIMP2-201ENST00000262768 GRIN2AQ12879 1464 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms