RNA–Protein interactions for RNA: ENST00000262577.5

ZC3H3-201, Transcript of zinc finger CCCH-type containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZC3H3, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3-201ENST00000262577 APLP2Q06481 763 aa17.38■□□□□ 0.37
ZC3H3-201ENST00000262577 CUL7Q14999 1698 aa17.37■□□□□ 0.37
ZC3H3-201ENST00000262577 ABCA5Q8WWZ7 1642 aa17.37■□□□□ 0.37
ZC3H3-201ENST00000262577 SUPT16HQ9Y5B9 1047 aaKnown RBP17.36■□□□□ 0.37
ZC3H3-201ENST00000262577 VPS8Q8N3P4 1428 aa17.34■□□□□ 0.37
ZC3H3-201ENST00000262577 ITGAEP38570 1179 aa17.34■□□□□ 0.37
ZC3H3-201ENST00000262577 RAD54L2Q9Y4B4 1467 aa17.33■□□□□ 0.36
ZC3H3-201ENST00000262577 TARBP1Q13395 1621 aaKnown RBP17.33■□□□□ 0.36
ZC3H3-201ENST00000262577 ARAP1Q96P48 1450 aa17.29■□□□□ 0.36
ZC3H3-201ENST00000262577 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
ZC3H3-201ENST00000262577 MRC2Q9UBG0 1479 aa17.27■□□□□ 0.36
ZC3H3-201ENST00000262577 ATP1B4Q9UN42 357 aaPredicted RBP17.27■□□□□ 0.36
ZC3H3-201ENST00000262577 BCANQ96GW7 911 aa17.25■□□□□ 0.35
ZC3H3-201ENST00000262577 WDR62O43379 1518 aa17.25■□□□□ 0.35
ZC3H3-201ENST00000262577 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
ZC3H3-201ENST00000262577 ARHGAP35Q9NRY4 1499 aa17.22■□□□□ 0.35
ZC3H3-201ENST00000262577 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
ZC3H3-201ENST00000262577 PBRM1Q86U86 1689 aa17.19■□□□□ 0.34
ZC3H3-201ENST00000262577 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
ZC3H3-201ENST00000262577 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
ZC3H3-201ENST00000262577 EFCAB5A4FU69 1503 aa17.13■□□□□ 0.33
ZC3H3-201ENST00000262577 MAP3K1Q13233 1512 aa17.12■□□□□ 0.33
ZC3H3-201ENST00000262577 IFT140Q96RY7 1462 aa17.11■□□□□ 0.33
ZC3H3-201ENST00000262577 CLSPNQ9HAW4 1339 aa17.08■□□□□ 0.33
ZC3H3-201ENST00000262577 ADAMTS12P58397 1594 aa17.08■□□□□ 0.32
ZC3H3-201ENST00000262577 SAMD9Q5K651 1589 aa17.07■□□□□ 0.32
ZC3H3-201ENST00000262577 TDRD9Q8NDG6 1382 aaKnown RBP17.07■□□□□ 0.32
ZC3H3-201ENST00000262577 AQRO60306 1485 aaKnown RBP eCLIP17.03■□□□□ 0.322e-6■■■■□ 22
ZC3H3-201ENST00000262577 CFAP43Q8NDM7 1665 aa17.03■□□□□ 0.32
ZC3H3-201ENST00000262577 GRIN2BQ13224 1484 aa17.02■□□□□ 0.32
ZC3H3-201ENST00000262577 FHAD1B1AJZ9 1412 aa17.02■□□□□ 0.32
ZC3H3-201ENST00000262577 ARID3CA6NKF2 412 aa17.01■□□□□ 0.31
ZC3H3-201ENST00000262577 TIAM1Q13009 1591 aa17■□□□□ 0.31
ZC3H3-201ENST00000262577 ERICH6Q7L0X2 663 aa17■□□□□ 0.31
ZC3H3-201ENST00000262577 RBM19Q9Y4C8 960 aaKnown RBP16.99■□□□□ 0.31
ZC3H3-201ENST00000262577 EIF4G3O43432 1585 aaKnown RBP16.98■□□□□ 0.31
ZC3H3-201ENST00000262577 FKBP8Q14318 412 aa16.98■□□□□ 0.31
ZC3H3-201ENST00000262577 PCF11O94913 1555 aaKnown RBP16.97■□□□□ 0.31
ZC3H3-201ENST00000262577 ERCC6Q03468 1493 aa16.97■□□□□ 0.31
ZC3H3-201ENST00000262577 FYCO1Q9BQS8 1478 aa16.96■□□□□ 0.31
ZC3H3-201ENST00000262577 ZNF608Q9ULD9 1512 aaPredicted RBP16.95■□□□□ 0.3
ZC3H3-201ENST00000262577 CASKIN1Q8WXD9 1431 aa16.93■□□□□ 0.3
ZC3H3-201ENST00000262577 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
ZC3H3-201ENST00000262577 SNAPC4Q5SXM2 1469 aa16.91■□□□□ 0.3
ZC3H3-201ENST00000262577 IQGAP2Q13576 1575 aa16.91■□□□□ 0.3
ZC3H3-201ENST00000262577 FMN1Q68DA7 1419 aa16.89■□□□□ 0.29
ZC3H3-201ENST00000262577 HIRIP3Q9BW71 556 aaPredicted RBP16.89■□□□□ 0.29
ZC3H3-201ENST00000262577 MAGI1Q96QZ7 1491 aaPredicted RBP16.89■□□□□ 0.29
ZC3H3-201ENST00000262577 LRRC9Q6ZRR7 1453 aa16.88■□□□□ 0.29
ZC3H3-201ENST00000262577 UGGT2Q9NYU1 1516 aa16.88■□□□□ 0.29
ZC3H3-201ENST00000262577 FHOD3Q2V2M9 1422 aa16.88■□□□□ 0.29
ZC3H3-201ENST00000262577 KANK4Q5T7N3 995 aaPredicted RBP16.88■□□□□ 0.29
ZC3H3-201ENST00000262577 LRRIQ1Q96JM4 1722 aa16.88■□□□□ 0.29
ZC3H3-201ENST00000262577 NEFLP07196 543 aa16.86■□□□□ 0.29
ZC3H3-201ENST00000262577 ANO8Q9HCE9 1232 aaPredicted RBP16.85■□□□□ 0.29
ZC3H3-201ENST00000262577 GRIN2AQ12879 1464 aa16.83■□□□□ 0.28
ZC3H3-201ENST00000262577 MSH5O43196 834 aa16.82■□□□□ 0.28
ZC3H3-201ENST00000262577 KIAA0586Q9BVV6 1533 aa16.81■□□□□ 0.28
ZC3H3-201ENST00000262577 FAM50AQ14320 339 aaKnown RBP16.81■□□□□ 0.28
ZC3H3-201ENST00000262577 KCNH8Q96L42 1107 aa16.81■□□□□ 0.28
ZC3H3-201ENST00000262577 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
ZC3H3-201ENST00000262577 FBLN2P98095 1184 aa16.76■□□□□ 0.27
ZC3H3-201ENST00000262577 KIAA0556O60303 1618 aa16.76■□□□□ 0.27
ZC3H3-201ENST00000262577 CEP170Q5SW79 1584 aa16.76■□□□□ 0.27
ZC3H3-201ENST00000262577 HECW1Q76N89 1606 aa16.75■□□□□ 0.27
ZC3H3-201ENST00000262577 DEKP35659 375 aaKnown RBP16.75■□□□□ 0.27
ZC3H3-201ENST00000262577 CCNB3Q8WWL7 1395 aa16.74■□□□□ 0.27
ZC3H3-201ENST00000262577 NUP160Q12769 1436 aa16.73■□□□□ 0.27
ZC3H3-201ENST00000262577 DISP1Q96F81 1524 aa16.73■□□□□ 0.27
ZC3H3-201ENST00000262577 CCDC18Q5T9S5 1454 aa16.73■□□□□ 0.27
ZC3H3-201ENST00000262577 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.73■□□□□ 0.272e-6■■■■■ 30.3
ZC3H3-201ENST00000262577 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
ZC3H3-201ENST00000262577 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
ZC3H3-201ENST00000262577 EHBP1L1Q8N3D4 1523 aa16.7■□□□□ 0.26
ZC3H3-201ENST00000262577 PHLDB1Q86UU1 1377 aa16.69■□□□□ 0.26
ZC3H3-201ENST00000262577 SUPT6HQ7KZ85 1726 aaKnown RBP16.68■□□□□ 0.26
ZC3H3-201ENST00000262577 DDX10Q13206 875 aaKnown RBP16.67■□□□□ 0.26
ZC3H3-201ENST00000262577 CCDC136Q96JN2 1154 aa16.66■□□□□ 0.26
ZC3H3-201ENST00000262577 SIN3AQ96ST3 1273 aa16.66■□□□□ 0.26
ZC3H3-201ENST00000262577 MAGI3Q5TCQ9 1506 aa16.64■□□□□ 0.25
ZC3H3-201ENST00000262577 EPRSP07814 1512 aaKnown RBP16.63■□□□□ 0.25
ZC3H3-201ENST00000262577 NBR1Q14596 966 aa16.62■□□□□ 0.25
ZC3H3-201ENST00000262577 SALL2Q9Y467 1007 aaPredicted RBP16.62■□□□□ 0.25
ZC3H3-201ENST00000262577 RAPGEF6Q8TEU7 1601 aa16.62■□□□□ 0.25
ZC3H3-201ENST00000262577 TRIM52Q96A61 297 aa16.62■□□□□ 0.25
ZC3H3-201ENST00000262577 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
ZC3H3-201ENST00000262577 NCOA2Q15596 1464 aa16.58■□□□□ 0.25
ZC3H3-201ENST00000262577 CHD1O14646 1710 aa16.58■□□□□ 0.24
ZC3H3-201ENST00000262577 FGD6Q6ZV73 1430 aa16.58■□□□□ 0.24
ZC3H3-201ENST00000262577 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
ZC3H3-201ENST00000262577 SHROOM2Q13796 1616 aa16.56■□□□□ 0.24
ZC3H3-201ENST00000262577 IRX6P78412 446 aaPredicted RBP16.56■□□□□ 0.24
ZC3H3-201ENST00000262577 MTUS2Q5JR59 1369 aa16.56■□□□□ 0.24
ZC3H3-201ENST00000262577 NUP153P49790 1475 aaKnown RBP16.55■□□□□ 0.24
ZC3H3-201ENST00000262577 RTN4Q9NQC3 1192 aaKnown RBP16.55■□□□□ 0.24
ZC3H3-201ENST00000262577 MYT1LQ9UL68 1186 aa16.55■□□□□ 0.24
ZC3H3-201ENST00000262577 MYOM3Q5VTT5 1437 aa16.55■□□□□ 0.24
ZC3H3-201ENST00000262577 TCOF1Q13428 1488 aaKnown RBP16.55■□□□□ 0.24
ZC3H3-201ENST00000262577 DHX57Q6P158 1386 aaKnown RBP16.54■□□□□ 0.24
ZC3H3-201ENST00000262577 ADCY10Q96PN6 1610 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms