RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
PFDN1-201ENST00000261813 RNF39Q9H2S5 420 aa19.53■□□□□ 0.72
PFDN1-201ENST00000261813 RIMBP3CA6NJZ7 1639 aa19.52■□□□□ 0.72
PFDN1-201ENST00000261813 RIMBP3BA6NNM3 1639 aa19.52■□□□□ 0.72
PFDN1-201ENST00000261813 RIMBP3Q9UFD9 1639 aa19.52■□□□□ 0.72
PFDN1-201ENST00000261813 CHD1O14646 1710 aa19.51■□□□□ 0.71
PFDN1-201ENST00000261813 ADAMTS12P58397 1594 aa19.5■□□□□ 0.71
PFDN1-201ENST00000261813 SYNJ2O15056 1496 aa19.5■□□□□ 0.71
PFDN1-201ENST00000261813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.5■□□□□ 0.71
PFDN1-201ENST00000261813 RUSC2Q8N2Y8 1516 aa19.49■□□□□ 0.71
PFDN1-201ENST00000261813 IGF1RP08069 1367 aa19.48■□□□□ 0.71
PFDN1-201ENST00000261813 FBLN2P98095 1184 aa19.47■□□□□ 0.71
PFDN1-201ENST00000261813 ARHGEF11O15085 1522 aa19.46■□□□□ 0.71
PFDN1-201ENST00000261813 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
PFDN1-201ENST00000261813 CHMP7Q8WUX9 453 aaPredicted RBP19.45■□□□□ 0.7
PFDN1-201ENST00000261813 SLC4A2P04920 1241 aa19.44■□□□□ 0.7
PFDN1-201ENST00000261813 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
PFDN1-201ENST00000261813 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
PFDN1-201ENST00000261813 CUL7Q14999 1698 aa19.4■□□□□ 0.7
PFDN1-201ENST00000261813 CARMIL1Q5VZK9 1371 aa19.35■□□□□ 0.69
PFDN1-201ENST00000261813 NUP160Q12769 1436 aa19.32■□□□□ 0.68
PFDN1-201ENST00000261813 CLASP1Q7Z460 1538 aa19.32■□□□□ 0.68
PFDN1-201ENST00000261813 TRHP20396 242 aaPredicted RBP19.32■□□□□ 0.68
PFDN1-201ENST00000261813 CEP170Q5SW79 1584 aa19.31■□□□□ 0.68
PFDN1-201ENST00000261813 EEA1Q15075 1411 aa19.31■□□□□ 0.68
PFDN1-201ENST00000261813 C1QBPQ07021 282 aaKnown RBP19.27■□□□□ 0.68
PFDN1-201ENST00000261813 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
PFDN1-201ENST00000261813 RAPGEF2Q9Y4G8 1499 aa19.26■□□□□ 0.67
PFDN1-201ENST00000261813 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
PFDN1-201ENST00000261813 FAM9AQ8IZU1 332 aaPredicted RBP19.25■□□□□ 0.67
PFDN1-201ENST00000261813 ARAP1Q96P48 1450 aa19.25■□□□□ 0.67
PFDN1-201ENST00000261813 U3KPZ7 1027 aaPredicted RBP19.23■□□□□ 0.67
PFDN1-201ENST00000261813 KIAA0586Q9BVV6 1533 aa19.16■□□□□ 0.66
PFDN1-201ENST00000261813 CACNB1Q02641 598 aaPredicted RBP19.15■□□□□ 0.66
PFDN1-201ENST00000261813 SHROOM2Q13796 1616 aa19.14■□□□□ 0.65
PFDN1-201ENST00000261813 KIF21BO75037 1637 aa19.11■□□□□ 0.65
PFDN1-201ENST00000261813 JPH4Q96JJ6 628 aa19.1■□□□□ 0.65
PFDN1-201ENST00000261813 IQGAP2Q13576 1575 aa19.09■□□□□ 0.65
PFDN1-201ENST00000261813 ERCC6L2Q5T890 1561 aa19.09■□□□□ 0.65
PFDN1-201ENST00000261813 CTTNBP2Q8WZ74 1663 aa19.06■□□□□ 0.64
PFDN1-201ENST00000261813 PRG4Q92954 1404 aaPredicted RBP19.06■□□□□ 0.64
PFDN1-201ENST00000261813 FOXD4L1Q9NU39 408 aa19.06■□□□□ 0.64
PFDN1-201ENST00000261813 GOLGA3Q08378 1498 aa19.01■□□□□ 0.63
PFDN1-201ENST00000261813 EHMT2Q96KQ7 1210 aa19■□□□□ 0.63
PFDN1-201ENST00000261813 UGGT2Q9NYU1 1516 aa18.99■□□□□ 0.63
PFDN1-201ENST00000261813 ZBTB22O15209 634 aa18.99■□□□□ 0.63
PFDN1-201ENST00000261813 DISP1Q96F81 1524 aa18.96■□□□□ 0.63
PFDN1-201ENST00000261813 MYCNP04198 464 aaPredicted RBP18.93■□□□□ 0.62
PFDN1-201ENST00000261813 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
PFDN1-201ENST00000261813 KIAA0556O60303 1618 aa18.92■□□□□ 0.62
PFDN1-201ENST00000261813 UBTFP17480 764 aaKnown RBP18.92■□□□□ 0.62
PFDN1-201ENST00000261813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.61
PFDN1-201ENST00000261813 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
PFDN1-201ENST00000261813 TNIKQ9UKE5 1360 aa18.87■□□□□ 0.61
PFDN1-201ENST00000261813 SAMD9Q5K651 1589 aa18.86■□□□□ 0.61
PFDN1-201ENST00000261813 PTPRGP23470 1445 aa18.84■□□□□ 0.61
PFDN1-201ENST00000261813 RANGAP1P46060 587 aaPredicted RBP18.83■□□□□ 0.61
PFDN1-201ENST00000261813 TTBK1Q5TCY1 1321 aaPredicted RBP18.82■□□□□ 0.6
PFDN1-201ENST00000261813 SAMD1Q6SPF0 538 aaPredicted RBP18.81■□□□□ 0.6
PFDN1-201ENST00000261813 P3H3Q8IVL6 736 aa18.8■□□□□ 0.6
PFDN1-201ENST00000261813 EFCAB5A4FU69 1503 aa18.78■□□□□ 0.6
PFDN1-201ENST00000261813 LOC105371045A0A1W2PR82 267 aa18.77■□□□□ 0.6
PFDN1-201ENST00000261813 FHOD3Q2V2M9 1422 aa18.76■□□□□ 0.59
PFDN1-201ENST00000261813 ADCY10Q96PN6 1610 aa18.76■□□□□ 0.59
PFDN1-201ENST00000261813 ARHGAP35Q9NRY4 1499 aa18.75■□□□□ 0.59
PFDN1-201ENST00000261813 APLP2Q06481 763 aa18.74■□□□□ 0.59
PFDN1-201ENST00000261813 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
PFDN1-201ENST00000261813 UACAQ9BZF9 1416 aa18.73■□□□□ 0.59
PFDN1-201ENST00000261813 PLB1Q6P1J6 1458 aa18.72■□□□□ 0.59
PFDN1-201ENST00000261813 UHRF1BP1LA0JNW5 1464 aa18.71■□□□□ 0.59
PFDN1-201ENST00000261813 ABCC2Q92887 1545 aa18.71■□□□□ 0.59
PFDN1-201ENST00000261813 ABCA8O94911 1581 aa18.7■□□□□ 0.58
PFDN1-201ENST00000261813 CLIP1P30622 1438 aa18.67■□□□□ 0.58
PFDN1-201ENST00000261813 CEP162Q5TB80 1403 aa18.64■□□□□ 0.57
PFDN1-201ENST00000261813 KDM5BQ9UGL1 1544 aa18.63■□□□□ 0.57
PFDN1-201ENST00000261813 RAPGEF6Q8TEU7 1601 aa18.63■□□□□ 0.57
PFDN1-201ENST00000261813 CAPN15O75808 1086 aa18.61■□□□□ 0.57
PFDN1-201ENST00000261813 NPM1P06748 294 aaKnown RBP eCLIP18.61■□□□□ 0.57
PFDN1-201ENST00000261813 FMN1Q68DA7 1419 aa18.59■□□□□ 0.57
PFDN1-201ENST00000261813 MAPKBP1O60336 1514 aa18.59■□□□□ 0.57
PFDN1-201ENST00000261813 ZCCHC11Q5TAX3 1644 aaKnown RBP18.59■□□□□ 0.57
PFDN1-201ENST00000261813 NUP153P49790 1475 aaKnown RBP18.57■□□□□ 0.56
PFDN1-201ENST00000261813 ATP10BO94823 1461 aa18.54■□□□□ 0.56
PFDN1-201ENST00000261813 ARID3CA6NKF2 412 aa18.54■□□□□ 0.56
PFDN1-201ENST00000261813 ZNF219Q9P2Y4 722 aaPredicted RBP18.54■□□□□ 0.56
PFDN1-201ENST00000261813 FAM69CQ0P6D2 419 aa18.53■□□□□ 0.56
PFDN1-201ENST00000261813 ASXL2Q76L83 1435 aa18.53■□□□□ 0.56
PFDN1-201ENST00000261813 PCF11O94913 1555 aaKnown RBP18.51■□□□□ 0.55
PFDN1-201ENST00000261813 KIF13AQ9H1H9 1805 aa18.5■□□□□ 0.55
PFDN1-201ENST00000261813 HECW1Q76N89 1606 aa18.5■□□□□ 0.55
PFDN1-201ENST00000261813 ATXN8OSP0DMR3 200 aa18.49■□□□□ 0.55
PFDN1-201ENST00000261813 CASKIN1Q8WXD9 1431 aa18.48■□□□□ 0.55
PFDN1-201ENST00000261813 ABCC10Q5T3U5 1492 aa18.48■□□□□ 0.55
PFDN1-201ENST00000261813 DIP2BQ9P265 1576 aa18.47■□□□□ 0.55
PFDN1-201ENST00000261813 DSG3P32926 999 aa18.47■□□□□ 0.55
PFDN1-201ENST00000261813 CDK13Q14004 1512 aaKnown RBP18.47■□□□□ 0.55
PFDN1-201ENST00000261813 ATP1B4Q9UN42 357 aaPredicted RBP18.46■□□□□ 0.55
PFDN1-201ENST00000261813 FYCO1Q9BQS8 1478 aa18.46■□□□□ 0.55
PFDN1-201ENST00000261813 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.55
PFDN1-201ENST00000261813 EPRSP07814 1512 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms