RNA–Protein interactions for RNA: ENST00000261503.9

SPECC1-201, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPECC1, Length 3,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-201ENST00000261503 IGF1RP08069 1367 aa14.2□□□□□ -0.14
SPECC1-201ENST00000261503 KCNH8Q96L42 1107 aa14.2□□□□□ -0.14
SPECC1-201ENST00000261503 ERCC6Q03468 1493 aa14.19□□□□□ -0.14
SPECC1-201ENST00000261503 RAD54L2Q9Y4B4 1467 aa14.19□□□□□ -0.14
SPECC1-201ENST00000261503 UNC13AQ9UPW8 1703 aa14.19□□□□□ -0.14
SPECC1-201ENST00000261503 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
SPECC1-201ENST00000261503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.18□□□□□ -0.14
SPECC1-201ENST00000261503 FHOD3Q2V2M9 1422 aa14.18□□□□□ -0.14
SPECC1-201ENST00000261503 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
SPECC1-201ENST00000261503 NESP48681 1621 aa14.17□□□□□ -0.14
SPECC1-201ENST00000261503 FGD5Q6ZNL6 1462 aa14.14□□□□□ -0.15
SPECC1-201ENST00000261503 KDM2AQ9Y2K7 1162 aa14.13□□□□□ -0.15
SPECC1-201ENST00000261503 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
SPECC1-201ENST00000261503 PLEKHD1A6NEE1 506 aa14.11□□□□□ -0.15
SPECC1-201ENST00000261503 FHAD1B1AJZ9 1412 aa14.11□□□□□ -0.15
SPECC1-201ENST00000261503 CFDP1Q9UEE9 299 aaPredicted RBP14.11□□□□□ -0.15
SPECC1-201ENST00000261503 TSPY4P0CV99 314 aa14.1□□□□□ -0.15
SPECC1-201ENST00000261503 TSPY10P0CW01 314 aa14.1□□□□□ -0.15
SPECC1-201ENST00000261503 CFTRP13569 1480 aa14.1□□□□□ -0.15
SPECC1-201ENST00000261503 FOXD1Q16676 465 aa14.09□□□□□ -0.15
SPECC1-201ENST00000261503 RAB3GAP2Q9H2M9 1393 aa14.06□□□□□ -0.16
SPECC1-201ENST00000261503 SENP3-EIF4A1A0A087X0R7 540 aa14.06□□□□□ -0.16
SPECC1-201ENST00000261503 CUX1P39880 1505 aa14.05□□□□□ -0.16
SPECC1-201ENST00000261503 CC2D2AQ9P2K1 1620 aa14.04□□□□□ -0.16
SPECC1-201ENST00000261503 KIF21BO75037 1637 aa14.03□□□□□ -0.16
SPECC1-201ENST00000261503 RGL3Q3MIN7 710 aa14.03□□□□□ -0.16
SPECC1-201ENST00000261503 SENP3Q9H4L4 574 aaPredicted RBP14.03□□□□□ -0.16
SPECC1-201ENST00000261503 ARAP1Q96P48 1450 aa14.02□□□□□ -0.17
SPECC1-201ENST00000261503 FAM9BQ8IZU0 186 aa14.02□□□□□ -0.17
SPECC1-201ENST00000261503 SETD5Q9C0A6 1442 aa14□□□□□ -0.17
SPECC1-201ENST00000261503 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
SPECC1-201ENST00000261503 CHGAP10645 457 aaKnown RBP13.99□□□□□ -0.17
SPECC1-201ENST00000261503 HNRNPUQ00839 825 aaKnown RBP eCLIP13.99□□□□□ -0.17
SPECC1-201ENST00000261503 ARHGAP35Q9NRY4 1499 aa13.98□□□□□ -0.17
SPECC1-201ENST00000261503 PRXQ9BXM0 1461 aa13.97□□□□□ -0.17
SPECC1-201ENST00000261503 SALL2Q9Y467 1007 aaPredicted RBP13.96□□□□□ -0.17
SPECC1-201ENST00000261503 TOP2BQ02880 1626 aa13.96□□□□□ -0.17
SPECC1-201ENST00000261503 JPH4Q96JJ6 628 aa13.96□□□□□ -0.17
SPECC1-201ENST00000261503 DHX57Q6P158 1386 aaKnown RBP13.96□□□□□ -0.17
SPECC1-201ENST00000261503 FMN1Q68DA7 1419 aa13.96□□□□□ -0.18
SPECC1-201ENST00000261503 EIF4G2P78344 907 aaKnown RBP eCLIP13.95□□□□□ -0.18
SPECC1-201ENST00000261503 HMGXB3Q12766 1538 aa13.95□□□□□ -0.18
SPECC1-201ENST00000261503 CLSPNQ9HAW4 1339 aa13.95□□□□□ -0.18
SPECC1-201ENST00000261503 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
SPECC1-201ENST00000261503 GAPVD1Q14C86 1478 aa13.95□□□□□ -0.18
SPECC1-201ENST00000261503 FKBP8Q14318 412 aa13.95□□□□□ -0.18
SPECC1-201ENST00000261503 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
SPECC1-201ENST00000261503 PHLDB1Q86UU1 1377 aa13.92□□□□□ -0.18
SPECC1-201ENST00000261503 PEG3Q9GZU2 1588 aa13.91□□□□□ -0.18
SPECC1-201ENST00000261503 IRX6P78412 446 aaPredicted RBP13.9□□□□□ -0.18
SPECC1-201ENST00000261503 POLA1P09884 1462 aaPredicted RBP13.89□□□□□ -0.19
SPECC1-201ENST00000261503 ZNF644Q9H582 1327 aaPredicted RBP13.88□□□□□ -0.19
SPECC1-201ENST00000261503 TOPBP1Q92547 1522 aa13.88□□□□□ -0.19
SPECC1-201ENST00000261503 MRS2Q9HD23 443 aa13.88□□□□□ -0.19
SPECC1-201ENST00000261503 MPHOSPH9Q99550 1183 aa13.87□□□□□ -0.19
SPECC1-201ENST00000261503 PPP1R15AO75807 674 aaPredicted RBP13.86□□□□□ -0.19
SPECC1-201ENST00000261503 PLPPR3Q6T4P5 718 aa13.86□□□□□ -0.19
SPECC1-201ENST00000261503 HNRNPMP52272 730 aaKnown RBP eCLIP13.86□□□□□ -0.19
SPECC1-201ENST00000261503 PKD2Q13563 968 aa13.84□□□□□ -0.19
SPECC1-201ENST00000261503 ERICH3Q5RHP9 1530 aa13.82□□□□□ -0.2
SPECC1-201ENST00000261503 L3MBTL2Q969R5 705 aa13.81□□□□□ -0.2
SPECC1-201ENST00000261503 HSPA5P11021 654 aaKnown RBP13.81□□□□□ -0.2
SPECC1-201ENST00000261503 DCAF11Q8TEB1 546 aa13.81□□□□□ -0.2
SPECC1-201ENST00000261503 TMC1Q8TDI8 760 aa13.81□□□□□ -0.2
SPECC1-201ENST00000261503 CARD11Q9BXL7 1154 aa13.8□□□□□ -0.2
SPECC1-201ENST00000261503 LRRC9Q6ZRR7 1453 aa13.8□□□□□ -0.2
SPECC1-201ENST00000261503 CARMIL2Q6F5E8 1435 aa13.79□□□□□ -0.2
SPECC1-201ENST00000261503 TIMELESSQ9UNS1 1208 aa13.74□□□□□ -0.21
SPECC1-201ENST00000261503 NUP155O75694 1391 aa13.74□□□□□ -0.21
SPECC1-201ENST00000261503 FGD6Q6ZV73 1430 aa13.72□□□□□ -0.21
SPECC1-201ENST00000261503 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
SPECC1-201ENST00000261503 SUPT16HQ9Y5B9 1047 aaKnown RBP13.71□□□□□ -0.21
SPECC1-201ENST00000261503 CASKIN1Q8WXD9 1431 aa13.7□□□□□ -0.22
SPECC1-201ENST00000261503 URB2Q14146 1524 aaKnown RBP13.7□□□□□ -0.22
SPECC1-201ENST00000261503 DNMBPQ6XZF7 1577 aa13.7□□□□□ -0.22
SPECC1-201ENST00000261503 RRBP1Q9P2E9 1410 aaKnown RBP13.7□□□□□ -0.22
SPECC1-201ENST00000261503 PTPRGP23470 1445 aa13.68□□□□□ -0.22
SPECC1-201ENST00000261503 CCDC18Q5T9S5 1454 aa13.68□□□□□ -0.22
SPECC1-201ENST00000261503 ABCA10Q8WWZ4 1543 aa13.67□□□□□ -0.22
SPECC1-201ENST00000261503 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
SPECC1-201ENST00000261503 NCOA2Q15596 1464 aa13.67□□□□□ -0.22
SPECC1-201ENST00000261503 MYOM3Q5VTT5 1437 aa13.66□□□□□ -0.22
SPECC1-201ENST00000261503 GGT6Q6P531 493 aa13.66□□□□□ -0.22
SPECC1-201ENST00000261503 ESF1Q9H501 851 aaKnown RBP13.65□□□□□ -0.22
SPECC1-201ENST00000261503 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
SPECC1-201ENST00000261503 ANKRD30AQ9BXX3 1397 aa13.64□□□□□ -0.23
SPECC1-201ENST00000261503 BCL11AQ9H165 835 aa13.64□□□□□ -0.23
SPECC1-201ENST00000261503 EFCAB2Q5VUJ9 269 aa13.64□□□□□ -0.23
SPECC1-201ENST00000261503 MRC2Q9UBG0 1479 aa13.64□□□□□ -0.23
SPECC1-201ENST00000261503 CC2D1BQ5T0F9 858 aaKnown RBP13.63□□□□□ -0.23
SPECC1-201ENST00000261503 ZNF608Q9ULD9 1512 aaPredicted RBP13.63□□□□□ -0.23
SPECC1-201ENST00000261503 TIAM1Q13009 1591 aa13.61□□□□□ -0.23
SPECC1-201ENST00000261503 PRDM2Q13029 1718 aa13.61□□□□□ -0.23
SPECC1-201ENST00000261503 KIF3BO15066 747 aa13.6□□□□□ -0.23
SPECC1-201ENST00000261503 SNAPC4Q5SXM2 1469 aa13.6□□□□□ -0.23
SPECC1-201ENST00000261503 PRG4Q92954 1404 aaPredicted RBP13.6□□□□□ -0.23
SPECC1-201ENST00000261503 FYCO1Q9BQS8 1478 aa13.6□□□□□ -0.23
SPECC1-201ENST00000261503 MLECQ14165 292 aa13.58□□□□□ -0.23
SPECC1-201ENST00000261503 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.24
SPECC1-201ENST00000261503 TNNT2P45379 298 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms