RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
TROAP-201ENST00000257909 SETD5Q9C0A6 1442 aa16.19■□□□□ 0.18
TROAP-201ENST00000257909 FANCIQ9NVI1 1328 aa16.19■□□□□ 0.18
TROAP-201ENST00000257909 ANP32CO43423 234 aa16.18■□□□□ 0.18
TROAP-201ENST00000257909 ITGAEP38570 1179 aa16.17■□□□□ 0.18
TROAP-201ENST00000257909 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
TROAP-201ENST00000257909 MAP3K1Q13233 1512 aa16.16■□□□□ 0.18
TROAP-201ENST00000257909 ARHGAP35Q9NRY4 1499 aa16.15■□□□□ 0.18
TROAP-201ENST00000257909 MSH5O43196 834 aa16.15■□□□□ 0.18
TROAP-201ENST00000257909 TRIM52Q96A61 297 aa16.14■□□□□ 0.17
TROAP-201ENST00000257909 NCAPD3P42695 1498 aa16.13■□□□□ 0.17
TROAP-201ENST00000257909 MYT1LQ9UL68 1186 aa16.12■□□□□ 0.17
TROAP-201ENST00000257909 PRDM2Q13029 1718 aa16.12■□□□□ 0.17
TROAP-201ENST00000257909 KIF27Q86VH2 1401 aa16.12■□□□□ 0.17
TROAP-201ENST00000257909 CDK11AQ9UQ88 783 aaPredicted RBP16.1■□□□□ 0.17
TROAP-201ENST00000257909 TIAM1Q13009 1591 aa16.1■□□□□ 0.17
TROAP-201ENST00000257909 CFTRP13569 1480 aa16.09■□□□□ 0.17
TROAP-201ENST00000257909 SIN3AQ96ST3 1273 aa16.09■□□□□ 0.17
TROAP-201ENST00000257909 ERICH6BQ5W0A0 696 aa16.04■□□□□ 0.16
TROAP-201ENST00000257909 LRRC9Q6ZRR7 1453 aa16.03■□□□□ 0.16
TROAP-201ENST00000257909 PHLDB1Q86UU1 1377 aa15.99■□□□□ 0.15
TROAP-201ENST00000257909 HIRIP3Q9BW71 556 aaPredicted RBP15.98■□□□□ 0.15
TROAP-201ENST00000257909 FAM50AQ14320 339 aaKnown RBP15.97■□□□□ 0.15
TROAP-201ENST00000257909 IGF1RP08069 1367 aa15.95■□□□□ 0.14
TROAP-201ENST00000257909 HNRNPUQ00839 825 aaKnown RBP eCLIP15.95■□□□□ 0.14
TROAP-201ENST00000257909 CFAP43Q8NDM7 1665 aa15.95■□□□□ 0.14
TROAP-201ENST00000257909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.95■□□□□ 0.14
TROAP-201ENST00000257909 TONSLQ96HA7 1378 aa15.94■□□□□ 0.14
TROAP-201ENST00000257909 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
TROAP-201ENST00000257909 PPP4R2Q9NY27 417 aa15.94■□□□□ 0.14
TROAP-201ENST00000257909 PCF11O94913 1555 aaKnown RBP15.91■□□□□ 0.14
TROAP-201ENST00000257909 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
TROAP-201ENST00000257909 IRX6P78412 446 aaPredicted RBP15.89■□□□□ 0.13
TROAP-201ENST00000257909 DEKP35659 375 aaKnown RBP15.88■□□□□ 0.13
TROAP-201ENST00000257909 CARMIL1Q5VZK9 1371 aa15.86■□□□□ 0.13
TROAP-201ENST00000257909 UACAQ9BZF9 1416 aa15.84■□□□□ 0.13
TROAP-201ENST00000257909 CCDC18Q5T9S5 1454 aa15.82■□□□□ 0.12
TROAP-201ENST00000257909 CADPSQ9ULU8 1353 aa15.82■□□□□ 0.12
TROAP-201ENST00000257909 NOP58Q9Y2X3 529 aaKnown RBP15.8■□□□□ 0.12
TROAP-201ENST00000257909 FYCO1Q9BQS8 1478 aa15.8■□□□□ 0.12
TROAP-201ENST00000257909 HFM1A2PYH4 1435 aa15.79■□□□□ 0.12
TROAP-201ENST00000257909 FHOD3Q2V2M9 1422 aa15.77■□□□□ 0.11
TROAP-201ENST00000257909 AQRO60306 1485 aaKnown RBP eCLIP15.77■□□□□ 0.119e-11■■■■■ 62.4
TROAP-201ENST00000257909 KDM5BQ9UGL1 1544 aa15.76■□□□□ 0.11
TROAP-201ENST00000257909 FGD6Q6ZV73 1430 aa15.76■□□□□ 0.11
TROAP-201ENST00000257909 CTTNBP2Q8WZ74 1663 aa15.76■□□□□ 0.11
TROAP-201ENST00000257909 NCOA2Q15596 1464 aa15.76■□□□□ 0.11
TROAP-201ENST00000257909 PTPN23Q9H3S7 1636 aa15.76■□□□□ 0.11
TROAP-201ENST00000257909 WASHC2AQ641Q2 1341 aa15.76■□□□□ 0.11
TROAP-201ENST00000257909 ZBED9Q6R2W3 1325 aa15.75■□□□□ 0.11
TROAP-201ENST00000257909 CASKIN1Q8WXD9 1431 aa15.75■□□□□ 0.11
TROAP-201ENST00000257909 P3H3Q8IVL6 736 aa15.75■□□□□ 0.11
TROAP-201ENST00000257909 CNTLNQ9NXG0 1405 aa15.75■□□□□ 0.11
TROAP-201ENST00000257909 B4GALNT3Q6L9W6 998 aa15.74■□□□□ 0.11
TROAP-201ENST00000257909 LRRIQ1Q96JM4 1722 aa15.74■□□□□ 0.11
TROAP-201ENST00000257909 RAD54L2Q9Y4B4 1467 aa15.73■□□□□ 0.11
TROAP-201ENST00000257909 EFCAB5A4FU69 1503 aa15.73■□□□□ 0.11
TROAP-201ENST00000257909 ATP1B4Q9UN42 357 aaPredicted RBP15.72■□□□□ 0.11
TROAP-201ENST00000257909 HSPA5P11021 654 aaKnown RBP15.72■□□□□ 0.11
TROAP-201ENST00000257909 FANCD2Q9BXW9 1451 aa15.71■□□□□ 0.11
TROAP-201ENST00000257909 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
TROAP-201ENST00000257909 CC2D2AQ9P2K1 1620 aa15.7■□□□□ 0.1
TROAP-201ENST00000257909 EIF4G2P78344 907 aaKnown RBP eCLIP15.7■□□□□ 0.1
TROAP-201ENST00000257909 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
TROAP-201ENST00000257909 NAIPQ13075 1403 aa15.69■□□□□ 0.1
TROAP-201ENST00000257909 CUL7Q14999 1698 aa15.69■□□□□ 0.1
TROAP-201ENST00000257909 POLA1P09884 1462 aaPredicted RBP15.68■□□□□ 0.1
TROAP-201ENST00000257909 FMN1Q68DA7 1419 aa15.68■□□□□ 0.1
TROAP-201ENST00000257909 NBR1Q14596 966 aa15.68■□□□□ 0.1
TROAP-201ENST00000257909 PRKRIP1Q9H875 184 aaPredicted RBP15.68■□□□□ 0.1
TROAP-201ENST00000257909 PTPRKQ15262 1439 aa15.68■□□□□ 0.1
TROAP-201ENST00000257909 SNAPC4Q5SXM2 1469 aa15.67■□□□□ 0.1
TROAP-201ENST00000257909 TOPBP1Q92547 1522 aa15.67■□□□□ 0.1
TROAP-201ENST00000257909 PAK3O75914 559 aaPredicted RBP15.66■□□□□ 0.1
TROAP-201ENST00000257909 CCDC184Q52MB2 194 aa15.66■□□□□ 0.1
TROAP-201ENST00000257909 ANP32AP39687 249 aaKnown RBP15.66■□□□□ 0.1
TROAP-201ENST00000257909 FAM9BQ8IZU0 186 aa15.66■□□□□ 0.1
TROAP-201ENST00000257909 MRS2Q9HD23 443 aa15.66■□□□□ 0.1
TROAP-201ENST00000257909 RTL5Q5HYW3 569 aaPredicted RBP15.65■□□□□ 0.1
TROAP-201ENST00000257909 IPO9Q96P70 1041 aaKnown RBP15.65■□□□□ 0.1
TROAP-201ENST00000257909 NCOA1Q15788 1441 aa15.64■□□□□ 0.09
TROAP-201ENST00000257909 MTUS2Q5JR59 1369 aa15.63■□□□□ 0.09
TROAP-201ENST00000257909 CCDC7Q96M83 1385 aa15.62■□□□□ 0.09
TROAP-201ENST00000257909 SMG6Q86US8 1419 aaKnown RBP15.62■□□□□ 0.09
TROAP-201ENST00000257909 NESP48681 1621 aa15.62■□□□□ 0.09
TROAP-201ENST00000257909 HECW1Q76N89 1606 aa15.61■□□□□ 0.09
TROAP-201ENST00000257909 SAMD9Q5K651 1589 aa15.61■□□□□ 0.09
TROAP-201ENST00000257909 MYOM3Q5VTT5 1437 aa15.61■□□□□ 0.09
TROAP-201ENST00000257909 ZBTB47Q9UFB7 747 aaPredicted RBP15.6■□□□□ 0.09
TROAP-201ENST00000257909 RNF123Q5XPI4 1314 aa15.58■□□□□ 0.09
TROAP-201ENST00000257909 CCDC136Q96JN2 1154 aa15.58■□□□□ 0.08
TROAP-201ENST00000257909 POLR1AO95602 1720 aaPredicted RBP15.57■□□□□ 0.08
TROAP-201ENST00000257909 GCC2Q8IWJ2 1684 aa15.57■□□□□ 0.08
TROAP-201ENST00000257909 SUPT6HQ7KZ85 1726 aaKnown RBP15.57■□□□□ 0.08
TROAP-201ENST00000257909 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
TROAP-201ENST00000257909 NUDCQ9Y266 331 aa15.55■□□□□ 0.08
TROAP-201ENST00000257909 C11orf95C9JLR9 678 aaPredicted RBP15.55■□□□□ 0.08
TROAP-201ENST00000257909 DENND4BO75064 1496 aaPredicted RBP15.54■□□□□ 0.08
TROAP-201ENST00000257909 GRIN2BQ13224 1484 aa15.54■□□□□ 0.08
TROAP-201ENST00000257909 AKNAQ7Z591 1439 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms