RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 FHAD1B1AJZ9 1412 aa13.95□□□□□ -0.18
SEMA6A-201ENST00000257414 RRP7BPQ9NSQ0 103 aa13.91□□□□□ -0.18
SEMA6A-201ENST00000257414 IRX6P78412 446 aaPredicted RBP13.9□□□□□ -0.19
SEMA6A-201ENST00000257414 FAM9BQ8IZU0 186 aa13.9□□□□□ -0.19
SEMA6A-201ENST00000257414 TIMELESSQ9UNS1 1208 aa13.88□□□□□ -0.19
SEMA6A-201ENST00000257414 KCNH8Q96L42 1107 aa13.87□□□□□ -0.19
SEMA6A-201ENST00000257414 ARHGAP35Q9NRY4 1499 aa13.85□□□□□ -0.19
SEMA6A-201ENST00000257414 ARAP1Q96P48 1450 aa13.85□□□□□ -0.19
SEMA6A-201ENST00000257414 EIF4G2P78344 907 aaKnown RBP eCLIP13.85□□□□□ -0.19
SEMA6A-201ENST00000257414 ANP32EQ9BTT0 268 aa13.84□□□□□ -0.19
SEMA6A-201ENST00000257414 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
SEMA6A-201ENST00000257414 ZNF777Q9ULD5 760 aaPredicted RBP13.83□□□□□ -0.2
SEMA6A-201ENST00000257414 MRS2Q9HD23 443 aa13.83□□□□□ -0.2
SEMA6A-201ENST00000257414 TSHZ2Q9NRE2 1034 aa13.83□□□□□ -0.2
SEMA6A-201ENST00000257414 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
SEMA6A-201ENST00000257414 CCER2I3L3R5 266 aa13.82□□□□□ -0.2
SEMA6A-201ENST00000257414 PRXQ9BXM0 1461 aa13.82□□□□□ -0.2
SEMA6A-201ENST00000257414 PPP1R15AO75807 674 aaPredicted RBP13.81□□□□□ -0.2
SEMA6A-201ENST00000257414 FHOD3Q2V2M9 1422 aa13.8□□□□□ -0.2
SEMA6A-201ENST00000257414 FBLN2P98095 1184 aa13.79□□□□□ -0.2
SEMA6A-201ENST00000257414 RRBP1Q9P2E9 1410 aaKnown RBP13.79□□□□□ -0.2
SEMA6A-201ENST00000257414 BICRAQ9NZM4 1560 aa13.79□□□□□ -0.2
SEMA6A-201ENST00000257414 CADPSQ9ULU8 1353 aa13.78□□□□□ -0.2
SEMA6A-201ENST00000257414 UNC13AQ9UPW8 1703 aa13.78□□□□□ -0.2
SEMA6A-201ENST00000257414 IGF1RP08069 1367 aa13.77□□□□□ -0.2
SEMA6A-201ENST00000257414 RTL5Q5HYW3 569 aaPredicted RBP13.77□□□□□ -0.21
SEMA6A-201ENST00000257414 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
SEMA6A-201ENST00000257414 NCAPD3P42695 1498 aa13.73□□□□□ -0.21
SEMA6A-201ENST00000257414 PHLDB1Q86UU1 1377 aa13.73□□□□□ -0.21
SEMA6A-201ENST00000257414 PEG3Q9GZU2 1588 aa13.73□□□□□ -0.21
SEMA6A-201ENST00000257414 FMN1Q68DA7 1419 aa13.73□□□□□ -0.21
SEMA6A-201ENST00000257414 CUX1P39880 1505 aa13.72□□□□□ -0.21
SEMA6A-201ENST00000257414 DAXXQ9UER7 740 aaPredicted RBP13.72□□□□□ -0.21
SEMA6A-201ENST00000257414 RBM19Q9Y4C8 960 aaKnown RBP13.7□□□□□ -0.22
SEMA6A-201ENST00000257414 FGD5Q6ZNL6 1462 aa13.7□□□□□ -0.22
SEMA6A-201ENST00000257414 LRRC9Q6ZRR7 1453 aa13.7□□□□□ -0.22
SEMA6A-201ENST00000257414 HSPA5P11021 654 aaKnown RBP13.7□□□□□ -0.22
SEMA6A-201ENST00000257414 ANP32AP39687 249 aaKnown RBP13.69□□□□□ -0.22
SEMA6A-201ENST00000257414 TMC1Q8TDI8 760 aa13.68□□□□□ -0.22
SEMA6A-201ENST00000257414 MYT1LQ9UL68 1186 aa13.68□□□□□ -0.22
SEMA6A-201ENST00000257414 TDRD9Q8NDG6 1382 aaKnown RBP13.68□□□□□ -0.22
SEMA6A-201ENST00000257414 CCDC136Q96JN2 1154 aa13.67□□□□□ -0.22
SEMA6A-201ENST00000257414 CFTRP13569 1480 aa13.67□□□□□ -0.22
SEMA6A-201ENST00000257414 PPP4R2Q9NY27 417 aa13.64□□□□□ -0.23
SEMA6A-201ENST00000257414 SENP3-EIF4A1A0A087X0R7 540 aa13.64□□□□□ -0.23
SEMA6A-201ENST00000257414 FOXD1Q16676 465 aa13.64□□□□□ -0.23
SEMA6A-201ENST00000257414 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
SEMA6A-201ENST00000257414 KDM2AQ9Y2K7 1162 aa13.64□□□□□ -0.23
SEMA6A-201ENST00000257414 CCDC18Q5T9S5 1454 aa13.64□□□□□ -0.23
SEMA6A-201ENST00000257414 FANCD2Q9BXW9 1451 aa13.63□□□□□ -0.23
SEMA6A-201ENST00000257414 TIAM1Q13009 1591 aa13.62□□□□□ -0.23
SEMA6A-201ENST00000257414 NPM2Q86SE8 214 aaKnown RBP13.62□□□□□ -0.23
SEMA6A-201ENST00000257414 HMGXB3Q12766 1538 aa13.61□□□□□ -0.23
SEMA6A-201ENST00000257414 B4GALNT3Q6L9W6 998 aa13.61□□□□□ -0.23
SEMA6A-201ENST00000257414 MPHOSPH9Q99550 1183 aa13.6□□□□□ -0.23
SEMA6A-201ENST00000257414 CFDP1Q9UEE9 299 aaPredicted RBP13.6□□□□□ -0.23
SEMA6A-201ENST00000257414 RAD54L2Q9Y4B4 1467 aa13.6□□□□□ -0.23
SEMA6A-201ENST00000257414 FGD6Q6ZV73 1430 aa13.6□□□□□ -0.23
SEMA6A-201ENST00000257414 BIVM-ERCC5R4GMW8 1640 aa13.59□□□□□ -0.23
SEMA6A-201ENST00000257414 TSPY4P0CV99 314 aa13.58□□□□□ -0.24
SEMA6A-201ENST00000257414 TSPY10P0CW01 314 aa13.58□□□□□ -0.24
SEMA6A-201ENST00000257414 NBR1Q14596 966 aa13.58□□□□□ -0.24
SEMA6A-201ENST00000257414 L3MBTL2Q969R5 705 aa13.58□□□□□ -0.24
SEMA6A-201ENST00000257414 WDR97A6NE52 1622 aa13.58□□□□□ -0.24
SEMA6A-201ENST00000257414 CHMP7Q8WUX9 453 aaPredicted RBP13.56□□□□□ -0.24
SEMA6A-201ENST00000257414 CASKIN1Q8WXD9 1431 aa13.55□□□□□ -0.24
SEMA6A-201ENST00000257414 UACAQ9BZF9 1416 aa13.54□□□□□ -0.24
SEMA6A-201ENST00000257414 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
SEMA6A-201ENST00000257414 FYCO1Q9BQS8 1478 aa13.53□□□□□ -0.24
SEMA6A-201ENST00000257414 CARD11Q9BXL7 1154 aa13.53□□□□□ -0.24
SEMA6A-201ENST00000257414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.52□□□□□ -0.24
SEMA6A-201ENST00000257414 MYOM3Q5VTT5 1437 aa13.51□□□□□ -0.25
SEMA6A-201ENST00000257414 ERICH6BQ5W0A0 696 aa13.51□□□□□ -0.25
SEMA6A-201ENST00000257414 PLEKHD1A6NEE1 506 aa13.5□□□□□ -0.25
SEMA6A-201ENST00000257414 PDS5BQ9NTI5 1447 aa13.5□□□□□ -0.25
SEMA6A-201ENST00000257414 NCOA2Q15596 1464 aa13.48□□□□□ -0.25
SEMA6A-201ENST00000257414 MAP3K1Q13233 1512 aa13.48□□□□□ -0.25
SEMA6A-201ENST00000257414 PCF11O94913 1555 aaKnown RBP13.47□□□□□ -0.25
SEMA6A-201ENST00000257414 PRKRIP1Q9H875 184 aaPredicted RBP13.47□□□□□ -0.25
SEMA6A-201ENST00000257414 RGL3Q3MIN7 710 aa13.47□□□□□ -0.25
SEMA6A-201ENST00000257414 PKD2Q13563 968 aa13.46□□□□□ -0.25
SEMA6A-201ENST00000257414 EFCAB5A4FU69 1503 aa13.46□□□□□ -0.25
SEMA6A-201ENST00000257414 MAPKBP1O60336 1514 aa13.46□□□□□ -0.26
SEMA6A-201ENST00000257414 BCL11AQ9H165 835 aa13.45□□□□□ -0.26
SEMA6A-201ENST00000257414 GAPVD1Q14C86 1478 aa13.45□□□□□ -0.26
SEMA6A-201ENST00000257414 WASHC2AQ641Q2 1341 aa13.45□□□□□ -0.26
SEMA6A-201ENST00000257414 HFM1A2PYH4 1435 aa13.44□□□□□ -0.26
SEMA6A-201ENST00000257414 NOP58Q9Y2X3 529 aaKnown RBP13.44□□□□□ -0.26
SEMA6A-201ENST00000257414 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.42□□□□□ -0.26
SEMA6A-201ENST00000257414 POLA1P09884 1462 aaPredicted RBP13.42□□□□□ -0.26
SEMA6A-201ENST00000257414 DCAF11Q8TEB1 546 aa13.42□□□□□ -0.26
SEMA6A-201ENST00000257414 CANXP27824 592 aaKnown RBP13.41□□□□□ -0.26
SEMA6A-201ENST00000257414 TOPBP1Q92547 1522 aa13.4□□□□□ -0.26
SEMA6A-201ENST00000257414 ZBED9Q6R2W3 1325 aa13.4□□□□□ -0.26
SEMA6A-201ENST00000257414 WDR43Q15061 677 aaKnown RBP eCLIP13.39□□□□□ -0.27
SEMA6A-201ENST00000257414 CCDC7Q96M83 1385 aa13.39□□□□□ -0.27
SEMA6A-201ENST00000257414 CNTLNQ9NXG0 1405 aa13.39□□□□□ -0.27
SEMA6A-201ENST00000257414 NESP48681 1621 aa13.39□□□□□ -0.27
SEMA6A-201ENST00000257414 NUDCQ9Y266 331 aa13.38□□□□□ -0.27
SEMA6A-201ENST00000257414 NAIPQ13075 1403 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms