RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 CC2D2AQ9P2K1 1620 aa16.49■□□□□ 0.23
PDE6B-201ENST00000255622 CARMIL1Q5VZK9 1371 aa16.48■□□□□ 0.23
PDE6B-201ENST00000255622 CCNB3Q8WWL7 1395 aa16.46■□□□□ 0.23
PDE6B-201ENST00000255622 P3H3Q8IVL6 736 aa16.43■□□□□ 0.22
PDE6B-201ENST00000255622 FANCD2Q9BXW9 1451 aa16.43■□□□□ 0.22
PDE6B-201ENST00000255622 CLSPNQ9HAW4 1339 aa16.4■□□□□ 0.22
PDE6B-201ENST00000255622 RAD54L2Q9Y4B4 1467 aa16.4■□□□□ 0.22
PDE6B-201ENST00000255622 TIAM1Q13009 1591 aa16.4■□□□□ 0.22
PDE6B-201ENST00000255622 CCDC136Q96JN2 1154 aa16.39■□□□□ 0.21
PDE6B-201ENST00000255622 NESP48681 1621 aa16.38■□□□□ 0.21
PDE6B-201ENST00000255622 ATP1B4Q9UN42 357 aaPredicted RBP16.37■□□□□ 0.21
PDE6B-201ENST00000255622 PHLDB1Q86UU1 1377 aa16.34■□□□□ 0.21
PDE6B-201ENST00000255622 RAB3GAP2Q9H2M9 1393 aa16.34■□□□□ 0.21
PDE6B-201ENST00000255622 LRRC9Q6ZRR7 1453 aa16.34■□□□□ 0.21
PDE6B-201ENST00000255622 PCF11O94913 1555 aaKnown RBP16.33■□□□□ 0.2
PDE6B-201ENST00000255622 POLA1P09884 1462 aaPredicted RBP16.32■□□□□ 0.2
PDE6B-201ENST00000255622 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
PDE6B-201ENST00000255622 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
PDE6B-201ENST00000255622 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
PDE6B-201ENST00000255622 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
PDE6B-201ENST00000255622 MAP3K1Q13233 1512 aa16.3■□□□□ 0.2
PDE6B-201ENST00000255622 ABCA10Q8WWZ4 1543 aa16.28■□□□□ 0.2
PDE6B-201ENST00000255622 UBE2Q2Q8WVN8 375 aa16.28■□□□□ 0.2
PDE6B-201ENST00000255622 MAPKBP1O60336 1514 aa16.28■□□□□ 0.2
PDE6B-201ENST00000255622 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.2
PDE6B-201ENST00000255622 CFAP43Q8NDM7 1665 aa16.27■□□□□ 0.19
PDE6B-201ENST00000255622 PODXL2Q9NZ53 605 aa16.26■□□□□ 0.19
PDE6B-201ENST00000255622 SALL2Q9Y467 1007 aaPredicted RBP16.24■□□□□ 0.19
PDE6B-201ENST00000255622 SETD5Q9C0A6 1442 aa16.24■□□□□ 0.19
PDE6B-201ENST00000255622 URB2Q14146 1524 aaKnown RBP16.21■□□□□ 0.18
PDE6B-201ENST00000255622 SIN3AQ96ST3 1273 aa16.2■□□□□ 0.18
PDE6B-201ENST00000255622 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
PDE6B-201ENST00000255622 CTTNBP2Q8WZ74 1663 aa16.19■□□□□ 0.18
PDE6B-201ENST00000255622 TDRD9Q8NDG6 1382 aaKnown RBP16.19■□□□□ 0.18
PDE6B-201ENST00000255622 CUL7Q14999 1698 aa16.19■□□□□ 0.18
PDE6B-201ENST00000255622 FYCO1Q9BQS8 1478 aa16.19■□□□□ 0.18
PDE6B-201ENST00000255622 EFCAB5A4FU69 1503 aa16.17■□□□□ 0.18
PDE6B-201ENST00000255622 CASKIN1Q8WXD9 1431 aa16.17■□□□□ 0.18
PDE6B-201ENST00000255622 WDR97A6NE52 1622 aa16.15■□□□□ 0.18
PDE6B-201ENST00000255622 PKNOX2Q96KN3 472 aa16.14■□□□□ 0.17
PDE6B-201ENST00000255622 LAMC3Q9Y6N6 1575 aa16.12■□□□□ 0.17
PDE6B-201ENST00000255622 SNAPC4Q5SXM2 1469 aa16.12■□□□□ 0.17
PDE6B-201ENST00000255622 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.17
PDE6B-201ENST00000255622 KCNH8Q96L42 1107 aa16.11■□□□□ 0.17
PDE6B-201ENST00000255622 ABCA5Q8WWZ7 1642 aa16.1■□□□□ 0.17
PDE6B-201ENST00000255622 FMN1Q68DA7 1419 aa16.1■□□□□ 0.17
PDE6B-201ENST00000255622 LRRIQ1Q96JM4 1722 aa16.09■□□□□ 0.17
PDE6B-201ENST00000255622 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
PDE6B-201ENST00000255622 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.08■□□□□ 0.17
PDE6B-201ENST00000255622 FGD6Q6ZV73 1430 aa16.08■□□□□ 0.16
PDE6B-201ENST00000255622 MTUS2Q5JR59 1369 aa16.08■□□□□ 0.16
PDE6B-201ENST00000255622 HIRIP3Q9BW71 556 aaPredicted RBP16.07■□□□□ 0.16
PDE6B-201ENST00000255622 TSHZ2Q9NRE2 1034 aa16.06■□□□□ 0.16
PDE6B-201ENST00000255622 KIF21AQ7Z4S6 1674 aa16.06■□□□□ 0.16
PDE6B-201ENST00000255622 SAMD9Q5K651 1589 aa16.05■□□□□ 0.16
PDE6B-201ENST00000255622 PTPRKQ15262 1439 aa16.05■□□□□ 0.16
PDE6B-201ENST00000255622 DDX10Q13206 875 aaKnown RBP16.03■□□□□ 0.16
PDE6B-201ENST00000255622 PDS5BQ9NTI5 1447 aa16.03■□□□□ 0.16
PDE6B-201ENST00000255622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.02■□□□□ 0.15
PDE6B-201ENST00000255622 GRIN2BQ13224 1484 aa16.01■□□□□ 0.15
PDE6B-201ENST00000255622 NCOA2Q15596 1464 aa16.01■□□□□ 0.15
PDE6B-201ENST00000255622 CCDC18Q5T9S5 1454 aa16■□□□□ 0.15
PDE6B-201ENST00000255622 TARBP1Q13395 1621 aaKnown RBP15.98■□□□□ 0.15
PDE6B-201ENST00000255622 PPP1R15AO75807 674 aaPredicted RBP15.97■□□□□ 0.15
PDE6B-201ENST00000255622 MAGI3Q5TCQ9 1506 aa15.97■□□□□ 0.15
PDE6B-201ENST00000255622 SUPT16HQ9Y5B9 1047 aaKnown RBP15.97■□□□□ 0.15
PDE6B-201ENST00000255622 MYOM3Q5VTT5 1437 aa15.96■□□□□ 0.15
PDE6B-201ENST00000255622 PTPN23Q9H3S7 1636 aa15.96■□□□□ 0.15
PDE6B-201ENST00000255622 ARID3CA6NKF2 412 aa15.96■□□□□ 0.15
PDE6B-201ENST00000255622 HFM1A2PYH4 1435 aa15.95■□□□□ 0.14
PDE6B-201ENST00000255622 SUPT6HQ7KZ85 1726 aaKnown RBP15.94■□□□□ 0.14
PDE6B-201ENST00000255622 NAIPQ13075 1403 aa15.93■□□□□ 0.14
PDE6B-201ENST00000255622 EHBP1L1Q8N3D4 1523 aa15.92■□□□□ 0.14
PDE6B-201ENST00000255622 CHIC2Q9UKJ5 165 aa15.92■□□□□ 0.14
PDE6B-201ENST00000255622 TIMELESSQ9UNS1 1208 aa15.92■□□□□ 0.14
PDE6B-201ENST00000255622 TONSLQ96HA7 1378 aa15.92■□□□□ 0.14
PDE6B-201ENST00000255622 UACAQ9BZF9 1416 aa15.92■□□□□ 0.14
PDE6B-201ENST00000255622 PBRM1Q86U86 1689 aa15.91■□□□□ 0.14
PDE6B-201ENST00000255622 RRP7BPQ9NSQ0 103 aa15.91■□□□□ 0.14
PDE6B-201ENST00000255622 THOC2Q8NI27 1593 aaKnown RBP15.91■□□□□ 0.14
PDE6B-201ENST00000255622 UGGT2Q9NYU1 1516 aa15.9■□□□□ 0.14
PDE6B-201ENST00000255622 CDK13Q14004 1512 aaKnown RBP15.88■□□□□ 0.13
PDE6B-201ENST00000255622 ARHGEF11O15085 1522 aa15.87■□□□□ 0.13
PDE6B-201ENST00000255622 IQGAP2Q13576 1575 aa15.87■□□□□ 0.13
PDE6B-201ENST00000255622 ADAMTS12P58397 1594 aa15.85■□□□□ 0.13
PDE6B-201ENST00000255622 EPRSP07814 1512 aaKnown RBP15.84■□□□□ 0.13
PDE6B-201ENST00000255622 HECW1Q76N89 1606 aa15.84■□□□□ 0.13
PDE6B-201ENST00000255622 RTN4Q9NQC3 1192 aaKnown RBP15.84■□□□□ 0.13
PDE6B-201ENST00000255622 KDM6BO15054 1643 aa15.84■□□□□ 0.13
PDE6B-201ENST00000255622 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.12
PDE6B-201ENST00000255622 ZNF608Q9ULD9 1512 aaPredicted RBP15.82■□□□□ 0.12
PDE6B-201ENST00000255622 KDM5BQ9UGL1 1544 aa15.82■□□□□ 0.12
PDE6B-201ENST00000255622 DEKP35659 375 aaKnown RBP15.81■□□□□ 0.12
PDE6B-201ENST00000255622 TRIM52Q96A61 297 aa15.81■□□□□ 0.12
PDE6B-201ENST00000255622 DENND4BO75064 1496 aaPredicted RBP15.81■□□□□ 0.12
PDE6B-201ENST00000255622 MRC2Q9UBG0 1479 aa15.8■□□□□ 0.12
PDE6B-201ENST00000255622 ANP32CO43423 234 aa15.79■□□□□ 0.12
PDE6B-201ENST00000255622 TCOF1Q13428 1488 aaKnown RBP15.79■□□□□ 0.12
PDE6B-201ENST00000255622 WDR62O43379 1518 aa15.79■□□□□ 0.12
PDE6B-201ENST00000255622 FOXD1Q16676 465 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms