RNA–Protein interactions for RNA: ENST00000249377.4

LRRC17-201, Transcript of leucine rich repeat containing 17, humanhuman

TSL 1 (best) BASIC

Gene LRRC17, Length 2,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC17-201ENST00000249377 SUPT16HQ9Y5B9 1047 aaKnown RBP19.77■□□□□ 0.76
LRRC17-201ENST00000249377 POLA1P09884 1462 aaPredicted RBP19.75■□□□□ 0.75
LRRC17-201ENST00000249377 RANGAP1P46060 587 aaPredicted RBP19.73■□□□□ 0.75
LRRC17-201ENST00000249377 KANK4Q5T7N3 995 aaPredicted RBP19.73■□□□□ 0.75
LRRC17-201ENST00000249377 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
LRRC17-201ENST00000249377 CCNB3Q8WWL7 1395 aa19.67■□□□□ 0.74
LRRC17-201ENST00000249377 IFT140Q96RY7 1462 aa19.66■□□□□ 0.74
LRRC17-201ENST00000249377 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
LRRC17-201ENST00000249377 ARHGAP35Q9NRY4 1499 aa19.64■□□□□ 0.73
LRRC17-201ENST00000249377 KIF27Q86VH2 1401 aa19.63■□□□□ 0.73
LRRC17-201ENST00000249377 ZNF608Q9ULD9 1512 aaPredicted RBP19.63■□□□□ 0.73
LRRC17-201ENST00000249377 MAPKBP1O60336 1514 aa19.6■□□□□ 0.73
LRRC17-201ENST00000249377 TDRD9Q8NDG6 1382 aaKnown RBP19.6■□□□□ 0.73
LRRC17-201ENST00000249377 MAP3K1Q13233 1512 aa19.58■□□□□ 0.73
LRRC17-201ENST00000249377 WDR97A6NE52 1622 aa19.58■□□□□ 0.72
LRRC17-201ENST00000249377 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.72
LRRC17-201ENST00000249377 TSHZ2Q9NRE2 1034 aa19.56■□□□□ 0.72
LRRC17-201ENST00000249377 EIF4G3O43432 1585 aaKnown RBP19.56■□□□□ 0.72
LRRC17-201ENST00000249377 RAB3GAP2Q9H2M9 1393 aa19.54■□□□□ 0.72
LRRC17-201ENST00000249377 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
LRRC17-201ENST00000249377 ABCA10Q8WWZ4 1543 aa19.53■□□□□ 0.72
LRRC17-201ENST00000249377 PBRM1Q86U86 1689 aa19.48■□□□□ 0.71
LRRC17-201ENST00000249377 GAPVD1Q14C86 1478 aa19.47■□□□□ 0.71
LRRC17-201ENST00000249377 SETD5Q9C0A6 1442 aa19.46■□□□□ 0.71
LRRC17-201ENST00000249377 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
LRRC17-201ENST00000249377 KCNH8Q96L42 1107 aa19.43■□□□□ 0.7
LRRC17-201ENST00000249377 LRRC9Q6ZRR7 1453 aa19.43■□□□□ 0.7
LRRC17-201ENST00000249377 CFAP43Q8NDM7 1665 aa19.41■□□□□ 0.7
LRRC17-201ENST00000249377 ANP32EQ9BTT0 268 aa19.41■□□□□ 0.7
LRRC17-201ENST00000249377 ITGAEP38570 1179 aa19.4■□□□□ 0.7
LRRC17-201ENST00000249377 FBLN2P98095 1184 aa19.4■□□□□ 0.7
LRRC17-201ENST00000249377 GRIN2BQ13224 1484 aa19.39■□□□□ 0.69
LRRC17-201ENST00000249377 IGF1RP08069 1367 aa19.38■□□□□ 0.69
LRRC17-201ENST00000249377 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
LRRC17-201ENST00000249377 TIMELESSQ9UNS1 1208 aa19.37■□□□□ 0.69
LRRC17-201ENST00000249377 PHLDB1Q86UU1 1377 aa19.36■□□□□ 0.69
LRRC17-201ENST00000249377 PPP1R15AO75807 674 aaPredicted RBP19.34■□□□□ 0.69
LRRC17-201ENST00000249377 CHD1O14646 1710 aa19.33■□□□□ 0.68
LRRC17-201ENST00000249377 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
LRRC17-201ENST00000249377 PCF11O94913 1555 aaKnown RBP19.3■□□□□ 0.68
LRRC17-201ENST00000249377 DDX10Q13206 875 aaKnown RBP19.3■□□□□ 0.68
LRRC17-201ENST00000249377 CHMP7Q8WUX9 453 aaPredicted RBP19.3■□□□□ 0.68
LRRC17-201ENST00000249377 CCER2I3L3R5 266 aa19.29■□□□□ 0.68
LRRC17-201ENST00000249377 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
LRRC17-201ENST00000249377 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
LRRC17-201ENST00000249377 FKBP8Q14318 412 aa19.27■□□□□ 0.68
LRRC17-201ENST00000249377 SIN3AQ96ST3 1273 aa19.27■□□□□ 0.68
LRRC17-201ENST00000249377 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.27■□□□□ 0.68
LRRC17-201ENST00000249377 ADAMTS12P58397 1594 aa19.26■□□□□ 0.67
LRRC17-201ENST00000249377 SYNJ2O15056 1496 aa19.23■□□□□ 0.67
LRRC17-201ENST00000249377 CUL7Q14999 1698 aa19.23■□□□□ 0.67
LRRC17-201ENST00000249377 BCANQ96GW7 911 aa19.22■□□□□ 0.67
LRRC17-201ENST00000249377 FYCO1Q9BQS8 1478 aa19.21■□□□□ 0.67
LRRC17-201ENST00000249377 FAM50AQ14320 339 aaKnown RBP19.2■□□□□ 0.66
LRRC17-201ENST00000249377 EFCAB5A4FU69 1503 aa19.18■□□□□ 0.66
LRRC17-201ENST00000249377 NEFLP07196 543 aa19.17■□□□□ 0.66
LRRC17-201ENST00000249377 OSCARQ8IYS5 282 aa19.17■□□□□ 0.66
LRRC17-201ENST00000249377 ANP32CO43423 234 aa19.16■□□□□ 0.66
LRRC17-201ENST00000249377 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
LRRC17-201ENST00000249377 CASKIN1Q8WXD9 1431 aa19.15■□□□□ 0.66
LRRC17-201ENST00000249377 RBM19Q9Y4C8 960 aaKnown RBP19.13■□□□□ 0.65
LRRC17-201ENST00000249377 FHOD3Q2V2M9 1422 aa19.1■□□□□ 0.65
LRRC17-201ENST00000249377 CCDC18Q5T9S5 1454 aa19.09■□□□□ 0.65
LRRC17-201ENST00000249377 FGD6Q6ZV73 1430 aa19.09■□□□□ 0.65
LRRC17-201ENST00000249377 TRIM52Q96A61 297 aa19.09■□□□□ 0.65
LRRC17-201ENST00000249377 CTTNBP2Q8WZ74 1663 aa19.08■□□□□ 0.65
LRRC17-201ENST00000249377 UACAQ9BZF9 1416 aa19.08■□□□□ 0.65
LRRC17-201ENST00000249377 CEP170Q5SW79 1584 aa19.08■□□□□ 0.64
LRRC17-201ENST00000249377 HFM1A2PYH4 1435 aa19.08■□□□□ 0.64
LRRC17-201ENST00000249377 TONSLQ96HA7 1378 aa19.07■□□□□ 0.64
LRRC17-201ENST00000249377 PTPN23Q9H3S7 1636 aa19.07■□□□□ 0.64
LRRC17-201ENST00000249377 HIRIP3Q9BW71 556 aaPredicted RBP19.07■□□□□ 0.64
LRRC17-201ENST00000249377 KDM5BQ9UGL1 1544 aa19.05■□□□□ 0.64
LRRC17-201ENST00000249377 P3H3Q8IVL6 736 aa19.02■□□□□ 0.64
LRRC17-201ENST00000249377 FMN1Q68DA7 1419 aa19.02■□□□□ 0.64
LRRC17-201ENST00000249377 PTPRKQ15262 1439 aa19.01■□□□□ 0.63
LRRC17-201ENST00000249377 NUP160Q12769 1436 aa19■□□□□ 0.63
LRRC17-201ENST00000249377 BCL11AQ9H165 835 aa18.98■□□□□ 0.63
LRRC17-201ENST00000249377 NAIPQ13075 1403 aa18.97■□□□□ 0.63
LRRC17-201ENST00000249377 LRRIQ1Q96JM4 1722 aa18.97■□□□□ 0.63
LRRC17-201ENST00000249377 CLASP1Q7Z460 1538 aa18.97■□□□□ 0.63
LRRC17-201ENST00000249377 ATP1B4Q9UN42 357 aaPredicted RBP18.97■□□□□ 0.63
LRRC17-201ENST00000249377 SAMD9Q5K651 1589 aa18.96■□□□□ 0.63
LRRC17-201ENST00000249377 MYOM3Q5VTT5 1437 aa18.93■□□□□ 0.62
LRRC17-201ENST00000249377 DNAJC5Q9H3Z4 198 aa18.93■□□□□ 0.62
LRRC17-201ENST00000249377 KIAA0586Q9BVV6 1533 aa18.92■□□□□ 0.62
LRRC17-201ENST00000249377 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
LRRC17-201ENST00000249377 FANCIQ9NVI1 1328 aa18.92■□□□□ 0.62
LRRC17-201ENST00000249377 JPH4Q96JJ6 628 aa18.92■□□□□ 0.62
LRRC17-201ENST00000249377 NCOA2Q15596 1464 aa18.92■□□□□ 0.62
LRRC17-201ENST00000249377 SUPT6HQ7KZ85 1726 aaKnown RBP18.92■□□□□ 0.62
LRRC17-201ENST00000249377 IQGAP2Q13576 1575 aa18.92■□□□□ 0.62
LRRC17-201ENST00000249377 MSH5O43196 834 aa18.91■□□□□ 0.62
LRRC17-201ENST00000249377 HECW1Q76N89 1606 aa18.9■□□□□ 0.62
LRRC17-201ENST00000249377 EHBP1L1Q8N3D4 1523 aa18.9■□□□□ 0.62
LRRC17-201ENST00000249377 GCC2Q8IWJ2 1684 aa18.89■□□□□ 0.61
LRRC17-201ENST00000249377 ERICH6BQ5W0A0 696 aa18.89■□□□□ 0.61
LRRC17-201ENST00000249377 ARHGEF11O15085 1522 aa18.89■□□□□ 0.61
LRRC17-201ENST00000249377 HNRNPUQ00839 825 aaKnown RBP eCLIP18.88■□□□□ 0.61
LRRC17-201ENST00000249377 UGGT2Q9NYU1 1516 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms