RNA–Protein interactions for RNA: ENST00000246657.2

CCR7-201, Transcript of C-C motif chemokine receptor 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR7, Length 2,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-201ENST00000246657 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
CCR7-201ENST00000246657 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.78
CCR7-201ENST00000246657 PDE4CQ08493 712 aa19.9■□□□□ 0.78
CCR7-201ENST00000246657 CUX1P39880 1505 aa19.88■□□□□ 0.77
CCR7-201ENST00000246657 FGD5Q6ZNL6 1462 aa19.88■□□□□ 0.77
CCR7-201ENST00000246657 RAD54L2Q9Y4B4 1467 aa19.87■□□□□ 0.77
CCR7-201ENST00000246657 SOGA1O94964 1423 aa19.87■□□□□ 0.77
CCR7-201ENST00000246657 CHD1O14646 1710 aa19.86■□□□□ 0.77
CCR7-201ENST00000246657 WDR97A6NE52 1622 aa19.85■□□□□ 0.77
CCR7-201ENST00000246657 NEFLP07196 543 aa19.84■□□□□ 0.77
CCR7-201ENST00000246657 RIMBP3CA6NJZ7 1639 aa19.81■□□□□ 0.76
CCR7-201ENST00000246657 RIMBP3BA6NNM3 1639 aa19.81■□□□□ 0.76
CCR7-201ENST00000246657 RIMBP3Q9UFD9 1639 aa19.81■□□□□ 0.76
CCR7-201ENST00000246657 TDRD9Q8NDG6 1382 aaKnown RBP19.79■□□□□ 0.76
CCR7-201ENST00000246657 FBXO3Q9UK99 471 aa19.79■□□□□ 0.76
CCR7-201ENST00000246657 ARHGEF11O15085 1522 aa19.75■□□□□ 0.75
CCR7-201ENST00000246657 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
CCR7-201ENST00000246657 FBLN2P98095 1184 aa19.73■□□□□ 0.75
CCR7-201ENST00000246657 GRIN2BQ13224 1484 aa19.71■□□□□ 0.75
CCR7-201ENST00000246657 MAGI1Q96QZ7 1491 aaPredicted RBP19.71■□□□□ 0.75
CCR7-201ENST00000246657 PBRM1Q86U86 1689 aa19.7■□□□□ 0.74
CCR7-201ENST00000246657 ABCA10Q8WWZ4 1543 aa19.67■□□□□ 0.74
CCR7-201ENST00000246657 CHMP4AQ9BY43 222 aa19.67■□□□□ 0.74
CCR7-201ENST00000246657 ANO8Q9HCE9 1232 aaPredicted RBP19.67■□□□□ 0.74
CCR7-201ENST00000246657 GAPVD1Q14C86 1478 aa19.65■□□□□ 0.74
CCR7-201ENST00000246657 ABCA5Q8WWZ7 1642 aa19.65■□□□□ 0.74
CCR7-201ENST00000246657 BIVM-ERCC5R4GMW8 1640 aa19.65■□□□□ 0.74
CCR7-201ENST00000246657 TOP2BQ02880 1626 aa19.64■□□□□ 0.73
CCR7-201ENST00000246657 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
CCR7-201ENST00000246657 SYNJ2O15056 1496 aa19.63■□□□□ 0.73
CCR7-201ENST00000246657 CHMP7Q8WUX9 453 aaPredicted RBP19.61■□□□□ 0.73
CCR7-201ENST00000246657 WRNQ14191 1432 aaPredicted RBP eCLIP19.61■□□□□ 0.73
CCR7-201ENST00000246657 CLASP1Q7Z460 1538 aa19.6■□□□□ 0.73
CCR7-201ENST00000246657 HAP1P54257 671 aaPredicted RBP19.6■□□□□ 0.73
CCR7-201ENST00000246657 TAF7LQ5H9L4 462 aa19.6■□□□□ 0.73
CCR7-201ENST00000246657 ANP32EQ9BTT0 268 aa19.57■□□□□ 0.72
CCR7-201ENST00000246657 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
CCR7-201ENST00000246657 ARAP1Q96P48 1450 aa19.55■□□□□ 0.72
CCR7-201ENST00000246657 CYB5RLQ6IPT4 315 aa19.53■□□□□ 0.72
CCR7-201ENST00000246657 TMEM132AQ24JP5 1023 aa19.52■□□□□ 0.72
CCR7-201ENST00000246657 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
CCR7-201ENST00000246657 SAMD1Q6SPF0 538 aaPredicted RBP19.49■□□□□ 0.71
CCR7-201ENST00000246657 BRD2P25440 801 aaKnown RBP19.47■□□□□ 0.71
CCR7-201ENST00000246657 DHX37Q8IY37 1157 aaKnown RBP19.46■□□□□ 0.71
CCR7-201ENST00000246657 PLCB2Q00722 1185 aa19.46■□□□□ 0.71
CCR7-201ENST00000246657 BCL11BQ9C0K0 894 aaPredicted RBP19.46■□□□□ 0.71
CCR7-201ENST00000246657 GRIN2AQ12879 1464 aa19.45■□□□□ 0.7
CCR7-201ENST00000246657 ERICH3Q5RHP9 1530 aa19.44■□□□□ 0.7
CCR7-201ENST00000246657 ZEB1P37275 1124 aaPredicted RBP19.42■□□□□ 0.7
CCR7-201ENST00000246657 FGD1P98174 961 aa19.42■□□□□ 0.7
CCR7-201ENST00000246657 FHAD1B1AJZ9 1412 aa19.41■□□□□ 0.7
CCR7-201ENST00000246657 CEP170Q5SW79 1584 aa19.38■□□□□ 0.69
CCR7-201ENST00000246657 NUP160Q12769 1436 aa19.37■□□□□ 0.69
CCR7-201ENST00000246657 CNKSR2Q8WXI2 1034 aa19.35■□□□□ 0.69
CCR7-201ENST00000246657 EEA1Q15075 1411 aa19.31■□□□□ 0.68
CCR7-201ENST00000246657 SHROOM2Q13796 1616 aa19.3■□□□□ 0.68
CCR7-201ENST00000246657 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
CCR7-201ENST00000246657 CDK11BP21127 795 aaKnown RBP19.29■□□□□ 0.68
CCR7-201ENST00000246657 CDK11AQ9UQ88 783 aaPredicted RBP19.29■□□□□ 0.68
CCR7-201ENST00000246657 ERCC6L2Q5T890 1561 aa19.28■□□□□ 0.68
CCR7-201ENST00000246657 KIF27Q86VH2 1401 aa19.23■□□□□ 0.67
CCR7-201ENST00000246657 CUL7Q14999 1698 aa19.22■□□□□ 0.67
CCR7-201ENST00000246657 RUSC2Q8N2Y8 1516 aa19.22■□□□□ 0.67
CCR7-201ENST00000246657 PRG4Q92954 1404 aaPredicted RBP19.17■□□□□ 0.66
CCR7-201ENST00000246657 IGF1RP08069 1367 aa19.16■□□□□ 0.66
CCR7-201ENST00000246657 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.66
CCR7-201ENST00000246657 UBTFP17480 764 aaKnown RBP19.14■□□□□ 0.65
CCR7-201ENST00000246657 CEP162Q5TB80 1403 aa19.13■□□□□ 0.65
CCR7-201ENST00000246657 JPH4Q96JJ6 628 aa19.13■□□□□ 0.65
CCR7-201ENST00000246657 GOLGA3Q08378 1498 aa19.11■□□□□ 0.65
CCR7-201ENST00000246657 KIF21BO75037 1637 aa19.11■□□□□ 0.65
CCR7-201ENST00000246657 KIAA0586Q9BVV6 1533 aa19.09■□□□□ 0.65
CCR7-201ENST00000246657 CARMIL1Q5VZK9 1371 aa19.05■□□□□ 0.64
CCR7-201ENST00000246657 HSP90B1P14625 803 aaKnown RBP19.05■□□□□ 0.64
CCR7-201ENST00000246657 ACIN1Q9UKV3 1341 aaKnown RBP19.04■□□□□ 0.64
CCR7-201ENST00000246657 CCDC136Q96JN2 1154 aa19.02■□□□□ 0.63
CCR7-201ENST00000246657 RSPH4AQ5TD94 716 aa19■□□□□ 0.63
CCR7-201ENST00000246657 AAMPQ13685 434 aa19■□□□□ 0.63
CCR7-201ENST00000246657 SALL2Q9Y467 1007 aaPredicted RBP18.98■□□□□ 0.63
CCR7-201ENST00000246657 IQGAP2Q13576 1575 aa18.97■□□□□ 0.63
CCR7-201ENST00000246657 KIF13AQ9H1H9 1805 aa18.96■□□□□ 0.63
CCR7-201ENST00000246657 ADCY10Q96PN6 1610 aa18.96■□□□□ 0.63
CCR7-201ENST00000246657 ERICH6BQ5W0A0 696 aa18.95■□□□□ 0.62
CCR7-201ENST00000246657 RAPGEF2Q9Y4G8 1499 aa18.93■□□□□ 0.62
CCR7-201ENST00000246657 A0A0U1RQG5 324 aaPredicted RBP18.92■□□□□ 0.62
CCR7-201ENST00000246657 ZNF326Q5BKZ1 582 aaKnown RBP18.92■□□□□ 0.62
CCR7-201ENST00000246657 CARMIL2Q6F5E8 1435 aa18.91■□□□□ 0.62
CCR7-201ENST00000246657 MAPKBP1O60336 1514 aa18.91■□□□□ 0.62
CCR7-201ENST00000246657 NPM1P06748 294 aaKnown RBP eCLIP18.91■□□□□ 0.62
CCR7-201ENST00000246657 IGSF3O75054 1194 aa18.91■□□□□ 0.62
CCR7-201ENST00000246657 NEUROD1Q13562 356 aa18.91■□□□□ 0.62
CCR7-201ENST00000246657 RSPH6AQ9H0K4 717 aa18.91■□□□□ 0.62
CCR7-201ENST00000246657 PPP6R1Q9UPN7 881 aa18.9■□□□□ 0.62
CCR7-201ENST00000246657 PTPRGP23470 1445 aa18.88■□□□□ 0.61
CCR7-201ENST00000246657 PAXIP1Q6ZW49 1069 aaPredicted RBP18.88■□□□□ 0.61
CCR7-201ENST00000246657 ABCC10Q5T3U5 1492 aa18.86■□□□□ 0.61
CCR7-201ENST00000246657 BCCIPQ9P287 314 aaKnown RBP eCLIP18.85■□□□□ 0.61
CCR7-201ENST00000246657 DIP2BQ9P265 1576 aa18.84■□□□□ 0.61
CCR7-201ENST00000246657 CLSPNQ9HAW4 1339 aa18.84■□□□□ 0.61
CCR7-201ENST00000246657 CTTNBP2Q8WZ74 1663 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms