RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 PHLDB1Q86UU1 1377 aa24.51■■□□□ 1.51
SSPN-201ENST00000242729 DNAJC5BQ9UF47 199 aa24.51■■□□□ 1.51
SSPN-201ENST00000242729 FHOD3Q2V2M9 1422 aa24.5■■□□□ 1.51
SSPN-201ENST00000242729 CLSPNQ9HAW4 1339 aa24.46■■□□□ 1.51
SSPN-201ENST00000242729 HIRIP3Q9BW71 556 aaPredicted RBP24.46■■□□□ 1.51
SSPN-201ENST00000242729 TIAM1Q13009 1591 aa24.42■■□□□ 1.5
SSPN-201ENST00000242729 KCNH8Q96L42 1107 aa24.41■■□□□ 1.5
SSPN-201ENST00000242729 LRRC9Q6ZRR7 1453 aa24.41■■□□□ 1.5
SSPN-201ENST00000242729 PRDM2Q13029 1718 aa24.4■■□□□ 1.5
SSPN-201ENST00000242729 TDRD9Q8NDG6 1382 aaKnown RBP24.38■■□□□ 1.49
SSPN-201ENST00000242729 POLA1P09884 1462 aaPredicted RBP24.37■■□□□ 1.49
SSPN-201ENST00000242729 PCF11O94913 1555 aaKnown RBP24.34■■□□□ 1.49
SSPN-201ENST00000242729 SETD5Q9C0A6 1442 aa24.33■■□□□ 1.49
SSPN-201ENST00000242729 TOPBP1Q92547 1522 aa24.32■■□□□ 1.48
SSPN-201ENST00000242729 ARID3CA6NKF2 412 aa24.31■■□□□ 1.48
SSPN-201ENST00000242729 MAPKBP1O60336 1514 aa24.3■■□□□ 1.48
SSPN-201ENST00000242729 FHAD1B1AJZ9 1412 aa24.29■■□□□ 1.48
SSPN-201ENST00000242729 DDX10Q13206 875 aaKnown RBP24.28■■□□□ 1.48
SSPN-201ENST00000242729 DNMBPQ6XZF7 1577 aa24.23■■□□□ 1.47
SSPN-201ENST00000242729 ABCA10Q8WWZ4 1543 aa24.21■■□□□ 1.47
SSPN-201ENST00000242729 URB2Q14146 1524 aaKnown RBP24.17■■□□□ 1.46
SSPN-201ENST00000242729 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
SSPN-201ENST00000242729 MTUS2Q5JR59 1369 aa24.17■■□□□ 1.46
SSPN-201ENST00000242729 MAP3K1Q13233 1512 aa24.14■■□□□ 1.46
SSPN-201ENST00000242729 CHIC2Q9UKJ5 165 aa24.14■■□□□ 1.45
SSPN-201ENST00000242729 CASKIN1Q8WXD9 1431 aa24.11■■□□□ 1.45
SSPN-201ENST00000242729 CFAP43Q8NDM7 1665 aa24.09■■□□□ 1.45
SSPN-201ENST00000242729 FYCO1Q9BQS8 1478 aa24.08■■□□□ 1.45
SSPN-201ENST00000242729 SUPT16HQ9Y5B9 1047 aaKnown RBP24.07■■□□□ 1.44
SSPN-201ENST00000242729 RRP7BPQ9NSQ0 103 aa24.07■■□□□ 1.44
SSPN-201ENST00000242729 PTPRKQ15262 1439 aa24.06■■□□□ 1.44
SSPN-201ENST00000242729 GAPVD1Q14C86 1478 aa24.05■■□□□ 1.44
SSPN-201ENST00000242729 FGD6Q6ZV73 1430 aa24.04■■□□□ 1.44
SSPN-201ENST00000242729 BCANQ96GW7 911 aa24.03■■□□□ 1.44
SSPN-201ENST00000242729 FMN1Q68DA7 1419 aa24.03■■□□□ 1.44
SSPN-201ENST00000242729 PPP1R15AO75807 674 aaPredicted RBP24.02■■□□□ 1.44
SSPN-201ENST00000242729 EFCAB5A4FU69 1503 aa23.99■■□□□ 1.43
SSPN-201ENST00000242729 SNAPC4Q5SXM2 1469 aa23.99■■□□□ 1.43
SSPN-201ENST00000242729 CTTNBP2Q8WZ74 1663 aa23.99■■□□□ 1.43
SSPN-201ENST00000242729 CUL7Q14999 1698 aa23.98■■□□□ 1.43
SSPN-201ENST00000242729 TONSLQ96HA7 1378 aa23.97■■□□□ 1.43
SSPN-201ENST00000242729 TRIM52Q96A61 297 aa23.97■■□□□ 1.43
SSPN-201ENST00000242729 AQRO60306 1485 aaKnown RBP eCLIP23.95■■□□□ 1.42
SSPN-201ENST00000242729 CCDC18Q5T9S5 1454 aa23.94■■□□□ 1.42
SSPN-201ENST00000242729 NCOA2Q15596 1464 aa23.94■■□□□ 1.42
SSPN-201ENST00000242729 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
SSPN-201ENST00000242729 FOXD1Q16676 465 aa23.92■■□□□ 1.42
SSPN-201ENST00000242729 LAMC3Q9Y6N6 1575 aa23.9■■□□□ 1.42
SSPN-201ENST00000242729 LRRIQ1Q96JM4 1722 aa23.89■■□□□ 1.41
SSPN-201ENST00000242729 KIF21AQ7Z4S6 1674 aa23.87■■□□□ 1.41
SSPN-201ENST00000242729 ABCA5Q8WWZ7 1642 aa23.86■■□□□ 1.41
SSPN-201ENST00000242729 MYOM3Q5VTT5 1437 aa23.85■■□□□ 1.41
SSPN-201ENST00000242729 NAIPQ13075 1403 aa23.84■■□□□ 1.41
SSPN-201ENST00000242729 GRIN2BQ13224 1484 aa23.83■■□□□ 1.41
SSPN-201ENST00000242729 ANP32CO43423 234 aa23.83■■□□□ 1.41
SSPN-201ENST00000242729 MAGI3Q5TCQ9 1506 aa23.83■■□□□ 1.41
SSPN-201ENST00000242729 HFM1A2PYH4 1435 aa23.81■■□□□ 1.4
SSPN-201ENST00000242729 FKBP8Q14318 412 aa23.81■■□□□ 1.4
SSPN-201ENST00000242729 SAMD9Q5K651 1589 aa23.8■■□□□ 1.4
SSPN-201ENST00000242729 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.79■■□□□ 1.4
SSPN-201ENST00000242729 CDK13Q14004 1512 aaKnown RBP23.79■■□□□ 1.4
SSPN-201ENST00000242729 PTPN23Q9H3S7 1636 aa23.78■■□□□ 1.4
SSPN-201ENST00000242729 UACAQ9BZF9 1416 aa23.78■■□□□ 1.4
SSPN-201ENST00000242729 TIMELESSQ9UNS1 1208 aa23.78■■□□□ 1.4
SSPN-201ENST00000242729 ZNF644Q9H582 1327 aaPredicted RBP23.75■■□□□ 1.39
SSPN-201ENST00000242729 FBLN2P98095 1184 aa23.73■■□□□ 1.39
SSPN-201ENST00000242729 CNGB1Q14028 1251 aaPredicted RBP23.72■■□□□ 1.39
SSPN-201ENST00000242729 SUPT6HQ7KZ85 1726 aaKnown RBP23.71■■□□□ 1.39
SSPN-201ENST00000242729 TARBP1Q13395 1621 aaKnown RBP23.71■■□□□ 1.39
SSPN-201ENST00000242729 ZNF608Q9ULD9 1512 aaPredicted RBP23.7■■□□□ 1.38
SSPN-201ENST00000242729 EHBP1L1Q8N3D4 1523 aa23.68■■□□□ 1.38
SSPN-201ENST00000242729 HSPA5P11021 654 aaKnown RBP23.67■■□□□ 1.38
SSPN-201ENST00000242729 KDM6BO15054 1643 aa23.67■■□□□ 1.38
SSPN-201ENST00000242729 MPHOSPH9Q99550 1183 aa23.67■■□□□ 1.38
SSPN-201ENST00000242729 UGGT2Q9NYU1 1516 aa23.66■■□□□ 1.38
SSPN-201ENST00000242729 EPRSP07814 1512 aaKnown RBP23.66■■□□□ 1.38
SSPN-201ENST00000242729 TSHZ2Q9NRE2 1034 aa23.65■■□□□ 1.38
SSPN-201ENST00000242729 ZNF777Q9ULD5 760 aaPredicted RBP23.64■■□□□ 1.38
SSPN-201ENST00000242729 L3MBTL2Q969R5 705 aa23.63■■□□□ 1.37
SSPN-201ENST00000242729 THOC2Q8NI27 1593 aaKnown RBP23.62■■□□□ 1.37
SSPN-201ENST00000242729 IQGAP2Q13576 1575 aa23.62■■□□□ 1.37
SSPN-201ENST00000242729 IRX6P78412 446 aaPredicted RBP23.6■■□□□ 1.37
SSPN-201ENST00000242729 WASHC2AQ641Q2 1341 aa23.6■■□□□ 1.37
SSPN-201ENST00000242729 DENND4BO75064 1496 aaPredicted RBP23.59■■□□□ 1.37
SSPN-201ENST00000242729 PBRM1Q86U86 1689 aa23.59■■□□□ 1.37
SSPN-201ENST00000242729 HNRNPUQ00839 825 aaKnown RBP eCLIP23.58■■□□□ 1.37
SSPN-201ENST00000242729 CCER2I3L3R5 266 aa23.57■■□□□ 1.36
SSPN-201ENST00000242729 C11orf95C9JLR9 678 aaPredicted RBP23.56■■□□□ 1.36
SSPN-201ENST00000242729 NEFLP07196 543 aa23.55■■□□□ 1.36
SSPN-201ENST00000242729 CCDC184Q52MB2 194 aa23.55■■□□□ 1.36
SSPN-201ENST00000242729 ZNF326Q5BKZ1 582 aaKnown RBP23.55■■□□□ 1.36
SSPN-201ENST00000242729 HECW1Q76N89 1606 aa23.55■■□□□ 1.36
SSPN-201ENST00000242729 KDM5BQ9UGL1 1544 aa23.54■■□□□ 1.36
SSPN-201ENST00000242729 SLC4A1APQ9BWU0 796 aaKnown RBP23.54■■□□□ 1.36
SSPN-201ENST00000242729 POLR3GLQ9BT43 218 aa23.53■■□□□ 1.36
SSPN-201ENST00000242729 ADAMTS12P58397 1594 aa23.53■■□□□ 1.36
SSPN-201ENST00000242729 ARHGEF11O15085 1522 aa23.53■■□□□ 1.36
SSPN-201ENST00000242729 MRC2Q9UBG0 1479 aa23.53■■□□□ 1.36
SSPN-201ENST00000242729 EIF4G2P78344 907 aaKnown RBP eCLIP23.52■■□□□ 1.36
SSPN-201ENST00000242729 NBPF8Q3BBV2 869 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms