RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
TTC1-201ENST00000231238 CREBZFQ9NS37 354 aa16.42■□□□□ 0.22
TTC1-201ENST00000231238 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
TTC1-201ENST00000231238 NCAPD3P42695 1498 aa16.37■□□□□ 0.21
TTC1-201ENST00000231238 HMGXB3Q12766 1538 aa16.34■□□□□ 0.21
TTC1-201ENST00000231238 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
TTC1-201ENST00000231238 FBXO3Q9UK99 471 aa16.31■□□□□ 0.2
TTC1-201ENST00000231238 FARP1Q9Y4F1 1045 aaPredicted RBP16.28■□□□□ 0.2
TTC1-201ENST00000231238 MNX1P50219 401 aaPredicted RBP16.25■□□□□ 0.19
TTC1-201ENST00000231238 MIER1Q8N108 512 aa16.24■□□□□ 0.19
TTC1-201ENST00000231238 TRIM41Q8WV44 630 aa16.2■□□□□ 0.18
TTC1-201ENST00000231238 PLCD3Q8N3E9 789 aa16.17■□□□□ 0.18
TTC1-201ENST00000231238 HAX1O00165 279 aa16.16■□□□□ 0.18
TTC1-201ENST00000231238 VASPP50552 380 aaPredicted RBP16.16■□□□□ 0.18
TTC1-201ENST00000231238 EVX2Q03828 476 aa16.13■□□□□ 0.17
TTC1-201ENST00000231238 C19orf67A6NJJ6 358 aa16.12■□□□□ 0.17
TTC1-201ENST00000231238 PLEKHG5O94827 1062 aa16.08■□□□□ 0.16
TTC1-201ENST00000231238 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.16
TTC1-201ENST00000231238 ABCC8Q09428 1581 aa16.02■□□□□ 0.16
TTC1-201ENST00000231238 CD44P16070 742 aaKnown RBP16■□□□□ 0.15
TTC1-201ENST00000231238 CADPSQ9ULU8 1353 aa16■□□□□ 0.15
TTC1-201ENST00000231238 CFTRP13569 1480 aa16■□□□□ 0.15
TTC1-201ENST00000231238 IFNLR1Q8IU57 520 aaPredicted RBP15.97■□□□□ 0.15
TTC1-201ENST00000231238 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
TTC1-201ENST00000231238 ZBTB47Q9UFB7 747 aaPredicted RBP15.95■□□□□ 0.14
TTC1-201ENST00000231238 FAM9AQ8IZU1 332 aaPredicted RBP15.93■□□□□ 0.14
TTC1-201ENST00000231238 NUBP1P53384 320 aa15.91■□□□□ 0.14
TTC1-201ENST00000231238 SP7Q8TDD2 431 aaPredicted RBP15.91■□□□□ 0.14
TTC1-201ENST00000231238 RASEFQ8IZ41 740 aa15.9■□□□□ 0.14
TTC1-201ENST00000231238 KLHL34Q8N239 644 aa15.9■□□□□ 0.14
TTC1-201ENST00000231238 ZRANB1Q9UGI0 708 aa15.88■□□□□ 0.13
TTC1-201ENST00000231238 PRDM2Q13029 1718 aa15.87■□□□□ 0.13
TTC1-201ENST00000231238 LAMC3Q9Y6N6 1575 aa15.85■□□□□ 0.13
TTC1-201ENST00000231238 TSPYL2Q9H2G4 693 aaPredicted RBP15.84■□□□□ 0.13
TTC1-201ENST00000231238 NESP48681 1621 aa15.84■□□□□ 0.13
TTC1-201ENST00000231238 SYNJ1O43426 1573 aa15.83■□□□□ 0.12
TTC1-201ENST00000231238 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.12
TTC1-201ENST00000231238 PAK3O75914 559 aaPredicted RBP15.8■□□□□ 0.12
TTC1-201ENST00000231238 PDS5BQ9NTI5 1447 aa15.8■□□□□ 0.12
TTC1-201ENST00000231238 ZNF579Q8NAF0 562 aaKnown RBP15.79■□□□□ 0.12
TTC1-201ENST00000231238 TOP2BQ02880 1626 aa15.78■□□□□ 0.12
TTC1-201ENST00000231238 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
TTC1-201ENST00000231238 LOC105371045A0A1W2PR82 267 aa15.76■□□□□ 0.11
TTC1-201ENST00000231238 CCDC61Q9Y6R9 512 aa15.76■□□□□ 0.11
TTC1-201ENST00000231238 SPOCK2Q92563 424 aa15.75■□□□□ 0.11
TTC1-201ENST00000231238 PHF12Q96QT6 1004 aa15.75■□□□□ 0.11
TTC1-201ENST00000231238 CUX1P39880 1505 aa15.75■□□□□ 0.11
TTC1-201ENST00000231238 BIVM-ERCC5R4GMW8 1640 aa15.74■□□□□ 0.11
TTC1-201ENST00000231238 GABBR2O75899 941 aa15.73■□□□□ 0.11
TTC1-201ENST00000231238 EEA1Q15075 1411 aa15.73■□□□□ 0.11
TTC1-201ENST00000231238 SOGA1O94964 1423 aa15.72■□□□□ 0.11
TTC1-201ENST00000231238 FAM212AQ96EL1 285 aa15.7■□□□□ 0.1
TTC1-201ENST00000231238 DCAF8Q5TAQ9 597 aa15.67■□□□□ 0.1
TTC1-201ENST00000231238 DNMBPQ6XZF7 1577 aa15.65■□□□□ 0.1
TTC1-201ENST00000231238 RUSC2Q8N2Y8 1516 aa15.62■□□□□ 0.09
TTC1-201ENST00000231238 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
TTC1-201ENST00000231238 ERCC6Q03468 1493 aa15.62■□□□□ 0.09
TTC1-201ENST00000231238 FGD5Q6ZNL6 1462 aa15.62■□□□□ 0.09
TTC1-201ENST00000231238 KIF21AQ7Z4S6 1674 aa15.62■□□□□ 0.09
TTC1-201ENST00000231238 KIF12Q96FN5 646 aa15.61■□□□□ 0.09
TTC1-201ENST00000231238 GALR2O43603 387 aaPredicted RBP15.6■□□□□ 0.09
TTC1-201ENST00000231238 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
TTC1-201ENST00000231238 CLCN6P51797 869 aa15.59■□□□□ 0.09
TTC1-201ENST00000231238 GSE1Q14687 1217 aa15.58■□□□□ 0.08
TTC1-201ENST00000231238 URB2Q14146 1524 aaKnown RBP15.57■□□□□ 0.08
TTC1-201ENST00000231238 MAP3K13O43283 966 aa15.56■□□□□ 0.08
TTC1-201ENST00000231238 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
TTC1-201ENST00000231238 CUX2O14529 1486 aa15.56■□□□□ 0.08
TTC1-201ENST00000231238 MRC2Q9UBG0 1479 aa15.56■□□□□ 0.08
TTC1-201ENST00000231238 MS4A3Q96HJ5 214 aa15.55■□□□□ 0.08
TTC1-201ENST00000231238 CIZ1Q9ULV3 898 aaPredicted RBP15.55■□□□□ 0.08
TTC1-201ENST00000231238 PYGBP11216 843 aa15.54■□□□□ 0.08
TTC1-201ENST00000231238 POLA1P09884 1462 aaPredicted RBP15.54■□□□□ 0.08
TTC1-201ENST00000231238 GOLGA3Q08378 1498 aa15.52■□□□□ 0.07
TTC1-201ENST00000231238 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
TTC1-201ENST00000231238 POTEIP0CG38 1075 aa15.46■□□□□ 0.07
TTC1-201ENST00000231238 KIF21BO75037 1637 aa15.46■□□□□ 0.07
TTC1-201ENST00000231238 ABCA10Q8WWZ4 1543 aa15.46■□□□□ 0.07
TTC1-201ENST00000231238 PCDHB13Q9Y5F0 798 aa15.46■□□□□ 0.06
TTC1-201ENST00000231238 CHRM1P11229 460 aaPredicted RBP15.44■□□□□ 0.06
TTC1-201ENST00000231238 SGIP1Q9BQI5 828 aa15.44■□□□□ 0.06
TTC1-201ENST00000231238 TRPC6Q9Y210 931 aa15.44■□□□□ 0.06
TTC1-201ENST00000231238 TNIKQ9UKE5 1360 aa15.43■□□□□ 0.06
TTC1-201ENST00000231238 WDR62O43379 1518 aa15.42■□□□□ 0.06
TTC1-201ENST00000231238 IFNL1Q8IU54 200 aa15.42■□□□□ 0.06
TTC1-201ENST00000231238 RAPGEF2Q9Y4G8 1499 aa15.4■□□□□ 0.06
TTC1-201ENST00000231238 TDRD9Q8NDG6 1382 aaKnown RBP15.4■□□□□ 0.06
TTC1-201ENST00000231238 IGF1RP08069 1367 aa15.39■□□□□ 0.05
TTC1-201ENST00000231238 PRXQ9BXM0 1461 aa15.38■□□□□ 0.05
TTC1-201ENST00000231238 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
TTC1-201ENST00000231238 CARMIL1Q5VZK9 1371 aa15.37■□□□□ 0.05
TTC1-201ENST00000231238 DCBLD2Q96PD2 775 aa15.37■□□□□ 0.05
TTC1-201ENST00000231238 GAPVD1Q14C86 1478 aa15.36■□□□□ 0.05
TTC1-201ENST00000231238 IFT140Q96RY7 1462 aa15.36■□□□□ 0.05
TTC1-201ENST00000231238 PCDHB8Q9UN66 801 aa15.36■□□□□ 0.05
TTC1-201ENST00000231238 CEP162Q5TB80 1403 aa15.36■□□□□ 0.05
TTC1-201ENST00000231238 THOC2Q8NI27 1593 aaKnown RBP15.36■□□□□ 0.05
TTC1-201ENST00000231238 RANGAP1P46060 587 aaPredicted RBP15.35■□□□□ 0.05
TTC1-201ENST00000231238 PKD2Q13563 968 aa15.35■□□□□ 0.05
TTC1-201ENST00000231238 WDR97A6NE52 1622 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms