RNA–Protein interactions for RNA: ENST00000230901.9

BRD8-201, Transcript of bromodomain containing 8, humanhuman

TSL 1 (best) BASIC

Gene BRD8, Length 3,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-201ENST00000230901 KIF27Q86VH2 1401 aa11.22□□□□□ -0.61
BRD8-201ENST00000230901 CCNB3Q8WWL7 1395 aa11.22□□□□□ -0.61
BRD8-201ENST00000230901 CCER2I3L3R5 266 aa11.2□□□□□ -0.62
BRD8-201ENST00000230901 RAB3GAP2Q9H2M9 1393 aa11.19□□□□□ -0.62
BRD8-201ENST00000230901 FANCD2Q9BXW9 1451 aa11.16□□□□□ -0.62
BRD8-201ENST00000230901 ITGAEP38570 1179 aa11.16□□□□□ -0.62
BRD8-201ENST00000230901 DDX10Q13206 875 aaKnown RBP11.16□□□□□ -0.62
BRD8-201ENST00000230901 MAP3K1Q13233 1512 aa11.15□□□□□ -0.63
BRD8-201ENST00000230901 ARHGAP35Q9NRY4 1499 aa11.14□□□□□ -0.63
BRD8-201ENST00000230901 NEFLP07196 543 aa11.14□□□□□ -0.63
BRD8-201ENST00000230901 RANGAP1P46060 587 aaPredicted RBP11.14□□□□□ -0.63
BRD8-201ENST00000230901 FGD5Q6ZNL6 1462 aa11.13□□□□□ -0.63
BRD8-201ENST00000230901 SETD5Q9C0A6 1442 aa11.12□□□□□ -0.63
BRD8-201ENST00000230901 PRKCSHP14314 528 aaPredicted RBP11.12□□□□□ -0.63
BRD8-201ENST00000230901 TIMELESSQ9UNS1 1208 aa11.11□□□□□ -0.63
BRD8-201ENST00000230901 TIAM1Q13009 1591 aa11.11□□□□□ -0.63
BRD8-201ENST00000230901 TRIM52Q96A61 297 aa11.1□□□□□ -0.63
BRD8-201ENST00000230901 LAMC3Q9Y6N6 1575 aa11.1□□□□□ -0.63
BRD8-201ENST00000230901 NESP48681 1621 aa11.1□□□□□ -0.63
BRD8-201ENST00000230901 DNMBPQ6XZF7 1577 aa11.09□□□□□ -0.63
BRD8-201ENST00000230901 IGF1RP08069 1367 aa11.09□□□□□ -0.63
BRD8-201ENST00000230901 MYT1LQ9UL68 1186 aa11.08□□□□□ -0.64
BRD8-201ENST00000230901 SIN3AQ96ST3 1273 aa11.07□□□□□ -0.64
BRD8-201ENST00000230901 TOPBP1Q92547 1522 aa11.06□□□□□ -0.64
BRD8-201ENST00000230901 CARMIL1Q5VZK9 1371 aa11.06□□□□□ -0.64
BRD8-201ENST00000230901 ANP32CO43423 234 aa11.05□□□□□ -0.64
BRD8-201ENST00000230901 CFAP43Q8NDM7 1665 aa11.04□□□□□ -0.64
BRD8-201ENST00000230901 ERICH6BQ5W0A0 696 aa11.04□□□□□ -0.64
BRD8-201ENST00000230901 LRRC9Q6ZRR7 1453 aa11.04□□□□□ -0.64
BRD8-201ENST00000230901 PDS5BQ9NTI5 1447 aa11.04□□□□□ -0.64
BRD8-201ENST00000230901 KDM5BQ9UGL1 1544 aa11.04□□□□□ -0.64
BRD8-201ENST00000230901 PHLDB1Q86UU1 1377 aa11.03□□□□□ -0.64
BRD8-201ENST00000230901 POLA1P09884 1462 aaPredicted RBP11.03□□□□□ -0.64
BRD8-201ENST00000230901 CDK11AQ9UQ88 783 aaPredicted RBP11.03□□□□□ -0.64
BRD8-201ENST00000230901 ABCA10Q8WWZ4 1543 aa11.03□□□□□ -0.64
BRD8-201ENST00000230901 DEKP35659 375 aaKnown RBP11.02□□□□□ -0.65
BRD8-201ENST00000230901 RAD54L2Q9Y4B4 1467 aa11.02□□□□□ -0.65
BRD8-201ENST00000230901 HIRIP3Q9BW71 556 aaPredicted RBP10.99□□□□□ -0.65
BRD8-201ENST00000230901 DNAJC5BQ9UF47 199 aa10.99□□□□□ -0.65
BRD8-201ENST00000230901 URB2Q14146 1524 aaKnown RBP10.99□□□□□ -0.65
BRD8-201ENST00000230901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.98□□□□□ -0.65
BRD8-201ENST00000230901 PPP4R2Q9NY27 417 aa10.97□□□□□ -0.65
BRD8-201ENST00000230901 ERICH6Q7L0X2 663 aa10.96□□□□□ -0.66
BRD8-201ENST00000230901 FHAD1B1AJZ9 1412 aa10.96□□□□□ -0.66
BRD8-201ENST00000230901 IRX6P78412 446 aaPredicted RBP10.95□□□□□ -0.66
BRD8-201ENST00000230901 CUL7Q14999 1698 aa10.95□□□□□ -0.66
BRD8-201ENST00000230901 NCOA2Q15596 1464 aa10.95□□□□□ -0.66
BRD8-201ENST00000230901 KIF21AQ7Z4S6 1674 aa10.94□□□□□ -0.66
BRD8-201ENST00000230901 PCF11O94913 1555 aaKnown RBP10.93□□□□□ -0.66
BRD8-201ENST00000230901 HNRNPUQ00839 825 aaKnown RBP eCLIP10.93□□□□□ -0.66
BRD8-201ENST00000230901 PAK3O75914 559 aaPredicted RBP10.91□□□□□ -0.66
BRD8-201ENST00000230901 NOP58Q9Y2X3 529 aaKnown RBP10.91□□□□□ -0.66
BRD8-201ENST00000230901 TDRD9Q8NDG6 1382 aaKnown RBP10.9□□□□□ -0.66
BRD8-201ENST00000230901 GAPVD1Q14C86 1478 aa10.9□□□□□ -0.66
BRD8-201ENST00000230901 ABCA5Q8WWZ7 1642 aa10.89□□□□□ -0.67
BRD8-201ENST00000230901 PTPN23Q9H3S7 1636 aa10.89□□□□□ -0.67
BRD8-201ENST00000230901 UACAQ9BZF9 1416 aa10.89□□□□□ -0.67
BRD8-201ENST00000230901 WASHC2AQ641Q2 1341 aa10.89□□□□□ -0.67
BRD8-201ENST00000230901 CCDC18Q5T9S5 1454 aa10.88□□□□□ -0.67
BRD8-201ENST00000230901 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
BRD8-201ENST00000230901 HFM1A2PYH4 1435 aa10.88□□□□□ -0.67
BRD8-201ENST00000230901 TONSLQ96HA7 1378 aa10.87□□□□□ -0.67
BRD8-201ENST00000230901 CCDC184Q52MB2 194 aa10.87□□□□□ -0.67
BRD8-201ENST00000230901 PTPRKQ15262 1439 aa10.87□□□□□ -0.67
BRD8-201ENST00000230901 CTTNBP2Q8WZ74 1663 aa10.87□□□□□ -0.67
BRD8-201ENST00000230901 EFCAB5A4FU69 1503 aa10.86□□□□□ -0.67
BRD8-201ENST00000230901 B4GALNT3Q6L9W6 998 aa10.86□□□□□ -0.67
BRD8-201ENST00000230901 P3H3Q8IVL6 736 aa10.86□□□□□ -0.67
BRD8-201ENST00000230901 CNTLNQ9NXG0 1405 aa10.86□□□□□ -0.67
BRD8-201ENST00000230901 MRC2Q9UBG0 1479 aa10.86□□□□□ -0.67
BRD8-201ENST00000230901 AQRO60306 1485 aaKnown RBP eCLIP10.85□□□□□ -0.676e-7■■■■□ 20.6
BRD8-201ENST00000230901 FAM50AQ14320 339 aaKnown RBP10.85□□□□□ -0.67
BRD8-201ENST00000230901 ZBED9Q6R2W3 1325 aa10.85□□□□□ -0.67
BRD8-201ENST00000230901 TARBP1Q13395 1621 aaKnown RBP10.85□□□□□ -0.67
BRD8-201ENST00000230901 FYCO1Q9BQS8 1478 aa10.85□□□□□ -0.67
BRD8-201ENST00000230901 DENND4BO75064 1496 aaPredicted RBP10.85□□□□□ -0.67
BRD8-201ENST00000230901 RNF123Q5XPI4 1314 aa10.84□□□□□ -0.67
BRD8-201ENST00000230901 POLR1AO95602 1720 aaPredicted RBP10.83□□□□□ -0.68
BRD8-201ENST00000230901 FGD6Q6ZV73 1430 aa10.83□□□□□ -0.68
BRD8-201ENST00000230901 FHOD3Q2V2M9 1422 aa10.83□□□□□ -0.68
BRD8-201ENST00000230901 ATP1B4Q9UN42 357 aaPredicted RBP10.82□□□□□ -0.68
BRD8-201ENST00000230901 NAIPQ13075 1403 aa10.82□□□□□ -0.68
BRD8-201ENST00000230901 CASKIN1Q8WXD9 1431 aa10.82□□□□□ -0.68
BRD8-201ENST00000230901 NCOA1Q15788 1441 aa10.82□□□□□ -0.68
BRD8-201ENST00000230901 HSPA5P11021 654 aaKnown RBP10.81□□□□□ -0.68
BRD8-201ENST00000230901 NBR1Q14596 966 aa10.81□□□□□ -0.68
BRD8-201ENST00000230901 IPO9Q96P70 1041 aaKnown RBP10.81□□□□□ -0.68
BRD8-201ENST00000230901 SALL2Q9Y467 1007 aaPredicted RBP10.81□□□□□ -0.68
BRD8-201ENST00000230901 HECW1Q76N89 1606 aa10.8□□□□□ -0.68
BRD8-201ENST00000230901 FMN1Q68DA7 1419 aa10.8□□□□□ -0.68
BRD8-201ENST00000230901 SMG6Q86US8 1419 aaKnown RBP10.8□□□□□ -0.68
BRD8-201ENST00000230901 PRKRIP1Q9H875 184 aaPredicted RBP10.8□□□□□ -0.68
BRD8-201ENST00000230901 LRRIQ1Q96JM4 1722 aa10.8□□□□□ -0.68
BRD8-201ENST00000230901 PBRM1Q86U86 1689 aa10.78□□□□□ -0.68
BRD8-201ENST00000230901 GCC2Q8IWJ2 1684 aa10.78□□□□□ -0.68
BRD8-201ENST00000230901 SNAPC4Q5SXM2 1469 aa10.77□□□□□ -0.68
BRD8-201ENST00000230901 IFT140Q96RY7 1462 aa10.77□□□□□ -0.68
BRD8-201ENST00000230901 C11orf95C9JLR9 678 aaPredicted RBP10.77□□□□□ -0.68
BRD8-201ENST00000230901 CCDC7Q96M83 1385 aa10.77□□□□□ -0.69
BRD8-201ENST00000230901 WDR62O43379 1518 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms