RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 GRIN2BQ13224 1484 aa11.39□□□□□ -0.59
NANOG-201ENST00000229307 CENPBP07199 599 aaPredicted RBP11.38□□□□□ -0.59
NANOG-201ENST00000229307 AQRO60306 1485 aaKnown RBP eCLIP11.37□□□□□ -0.59
NANOG-201ENST00000229307 FGD5Q6ZNL6 1462 aa11.37□□□□□ -0.59
NANOG-201ENST00000229307 CLIP1P30622 1438 aa11.35□□□□□ -0.59
NANOG-201ENST00000229307 KCNH8Q96L42 1107 aa11.35□□□□□ -0.59
NANOG-201ENST00000229307 GAPVD1Q14C86 1478 aa11.34□□□□□ -0.59
NANOG-201ENST00000229307 POLA1P09884 1462 aaPredicted RBP11.34□□□□□ -0.59
NANOG-201ENST00000229307 CARMIL1Q5VZK9 1371 aa11.32□□□□□ -0.6
NANOG-201ENST00000229307 CARMIL2Q6F5E8 1435 aa11.32□□□□□ -0.6
NANOG-201ENST00000229307 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
NANOG-201ENST00000229307 NEUROD1Q13562 356 aa11.32□□□□□ -0.6
NANOG-201ENST00000229307 ACIN1Q9UKV3 1341 aaKnown RBP11.31□□□□□ -0.6
NANOG-201ENST00000229307 MAGI1Q96QZ7 1491 aaPredicted RBP11.31□□□□□ -0.6
NANOG-201ENST00000229307 ZNF326Q5BKZ1 582 aaKnown RBP11.31□□□□□ -0.6
NANOG-201ENST00000229307 PLPPR3Q6T4P5 718 aa11.29□□□□□ -0.6
NANOG-201ENST00000229307 NEFLP07196 543 aa11.29□□□□□ -0.6
NANOG-201ENST00000229307 SYNJ1O43426 1573 aa11.29□□□□□ -0.6
NANOG-201ENST00000229307 PRDM2Q13029 1718 aa11.29□□□□□ -0.6
NANOG-201ENST00000229307 SNAPC4Q5SXM2 1469 aa11.29□□□□□ -0.6
NANOG-201ENST00000229307 CHGAP10645 457 aaKnown RBP11.28□□□□□ -0.6
NANOG-201ENST00000229307 AEBP2Q6ZN18 517 aaPredicted RBP11.27□□□□□ -0.61
NANOG-201ENST00000229307 ZNF608Q9ULD9 1512 aaPredicted RBP11.27□□□□□ -0.61
NANOG-201ENST00000229307 SYNJ2O15056 1496 aa11.26□□□□□ -0.61
NANOG-201ENST00000229307 WDR97A6NE52 1622 aa11.25□□□□□ -0.61
NANOG-201ENST00000229307 ARID4BQ4LE39 1312 aaPredicted RBP11.25□□□□□ -0.61
NANOG-201ENST00000229307 FHAD1B1AJZ9 1412 aa11.25□□□□□ -0.61
NANOG-201ENST00000229307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.23□□□□□ -0.61
NANOG-201ENST00000229307 TNIKQ9UKE5 1360 aa11.22□□□□□ -0.61
NANOG-201ENST00000229307 CFDP1Q9UEE9 299 aaPredicted RBP11.22□□□□□ -0.61
NANOG-201ENST00000229307 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
NANOG-201ENST00000229307 CUX1P39880 1505 aa11.2□□□□□ -0.62
NANOG-201ENST00000229307 EIF4G3O43432 1585 aaKnown RBP11.2□□□□□ -0.62
NANOG-201ENST00000229307 ABCA10Q8WWZ4 1543 aa11.2□□□□□ -0.62
NANOG-201ENST00000229307 CHIC2Q9UKJ5 165 aa11.2□□□□□ -0.62
NANOG-201ENST00000229307 CEP162Q5TB80 1403 aa11.19□□□□□ -0.62
NANOG-201ENST00000229307 CNGB1Q14028 1251 aaPredicted RBP11.18□□□□□ -0.62
NANOG-201ENST00000229307 NEFMP07197 916 aa11.16□□□□□ -0.62
NANOG-201ENST00000229307 CCNB3Q8WWL7 1395 aa11.15□□□□□ -0.62
NANOG-201ENST00000229307 PPP1R15AO75807 674 aaPredicted RBP11.14□□□□□ -0.63
NANOG-201ENST00000229307 TONSLQ96HA7 1378 aa11.13□□□□□ -0.63
NANOG-201ENST00000229307 HRCP23327 699 aa11.12□□□□□ -0.63
NANOG-201ENST00000229307 TOP2BQ02880 1626 aa11.12□□□□□ -0.63
NANOG-201ENST00000229307 RAPGEF2Q9Y4G8 1499 aa11.12□□□□□ -0.63
NANOG-201ENST00000229307 GRIN2AQ12879 1464 aa11.11□□□□□ -0.63
NANOG-201ENST00000229307 YTHDC1Q96MU7 727 aaKnown RBP11.11□□□□□ -0.63
NANOG-201ENST00000229307 ERICH3Q5RHP9 1530 aa11.11□□□□□ -0.63
NANOG-201ENST00000229307 FMN1Q68DA7 1419 aa11.11□□□□□ -0.63
NANOG-201ENST00000229307 ARHGEF11O15085 1522 aa11.1□□□□□ -0.63
NANOG-201ENST00000229307 PRG4Q92954 1404 aaPredicted RBP11.1□□□□□ -0.63
NANOG-201ENST00000229307 PTPRGP23470 1445 aa11.1□□□□□ -0.63
NANOG-201ENST00000229307 FAM69CQ0P6D2 419 aa11.08□□□□□ -0.64
NANOG-201ENST00000229307 KANK1Q14678 1352 aa11.08□□□□□ -0.64
NANOG-201ENST00000229307 TARBP1Q13395 1621 aaKnown RBP11.07□□□□□ -0.64
NANOG-201ENST00000229307 EFCAB2Q5VUJ9 269 aa11.06□□□□□ -0.64
NANOG-201ENST00000229307 RRP7BPQ9NSQ0 103 aa11.06□□□□□ -0.64
NANOG-201ENST00000229307 ANP32CO43423 234 aa11.05□□□□□ -0.64
NANOG-201ENST00000229307 HDGFP51858 240 aaKnown RBP11.05□□□□□ -0.64
NANOG-201ENST00000229307 C14orf37Q86TY3 774 aa11.04□□□□□ -0.64
NANOG-201ENST00000229307 IGF1RP08069 1367 aa11.03□□□□□ -0.64
NANOG-201ENST00000229307 KIAA0586Q9BVV6 1533 aa11.02□□□□□ -0.64
NANOG-201ENST00000229307 BIVM-ERCC5R4GMW8 1640 aa11.01□□□□□ -0.65
NANOG-201ENST00000229307 CHD1O14646 1710 aa11□□□□□ -0.65
NANOG-201ENST00000229307 RIMBP3CA6NJZ7 1639 aa11□□□□□ -0.65
NANOG-201ENST00000229307 RIMBP3BA6NNM3 1639 aa11□□□□□ -0.65
NANOG-201ENST00000229307 RIMBP3Q9UFD9 1639 aa11□□□□□ -0.65
NANOG-201ENST00000229307 SLC24A1O60721 1099 aa11□□□□□ -0.65
NANOG-201ENST00000229307 CUL7Q14999 1698 aa10.99□□□□□ -0.65
NANOG-201ENST00000229307 ADAMTS12P58397 1594 aa10.99□□□□□ -0.65
NANOG-201ENST00000229307 PBRM1Q86U86 1689 aa10.98□□□□□ -0.65
NANOG-201ENST00000229307 ERICH6Q7L0X2 663 aa10.98□□□□□ -0.65
NANOG-201ENST00000229307 NUP160Q12769 1436 aa10.97□□□□□ -0.65
NANOG-201ENST00000229307 RSPH4AQ5TD94 716 aa10.97□□□□□ -0.65
NANOG-201ENST00000229307 KDM2AQ9Y2K7 1162 aa10.97□□□□□ -0.65
NANOG-201ENST00000229307 ARHGAP35Q9NRY4 1499 aa10.97□□□□□ -0.65
NANOG-201ENST00000229307 MLECQ14165 292 aa10.96□□□□□ -0.65
NANOG-201ENST00000229307 CCDC18Q5T9S5 1454 aa10.95□□□□□ -0.66
NANOG-201ENST00000229307 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
NANOG-201ENST00000229307 DIEXFQ68CQ4 756 aaKnown RBP10.95□□□□□ -0.66
NANOG-201ENST00000229307 VPS8Q8N3P4 1428 aa10.95□□□□□ -0.66
NANOG-201ENST00000229307 SCAF1Q9H7N4 1312 aaKnown RBP10.94□□□□□ -0.66
NANOG-201ENST00000229307 ARAP1Q96P48 1450 aa10.94□□□□□ -0.66
NANOG-201ENST00000229307 ZBTB47Q9UFB7 747 aaPredicted RBP10.92□□□□□ -0.66
NANOG-201ENST00000229307 CDCA8Q53HL2 280 aa10.91□□□□□ -0.66
NANOG-201ENST00000229307 ZNF316A6NFI3 1004 aaPredicted RBP10.91□□□□□ -0.66
NANOG-201ENST00000229307 HAP1P54257 671 aaPredicted RBP10.9□□□□□ -0.66
NANOG-201ENST00000229307 FHOD3Q2V2M9 1422 aa10.9□□□□□ -0.66
NANOG-201ENST00000229307 PLB1Q6P1J6 1458 aa10.9□□□□□ -0.66
NANOG-201ENST00000229307 GGT6Q6P531 493 aa10.9□□□□□ -0.66
NANOG-201ENST00000229307 CEP170Q5SW79 1584 aa10.9□□□□□ -0.67
NANOG-201ENST00000229307 UACAQ9BZF9 1416 aa10.89□□□□□ -0.67
NANOG-201ENST00000229307 ANKRD30AQ9BXX3 1397 aa10.89□□□□□ -0.67
NANOG-201ENST00000229307 RGL3Q3MIN7 710 aa10.88□□□□□ -0.67
NANOG-201ENST00000229307 SPAG9O60271 1321 aaKnown RBP10.88□□□□□ -0.67
NANOG-201ENST00000229307 CLASP1Q7Z460 1538 aa10.88□□□□□ -0.67
NANOG-201ENST00000229307 IQGAP2Q13576 1575 aa10.88□□□□□ -0.67
NANOG-201ENST00000229307 POGKQ9P215 609 aa10.87□□□□□ -0.67
NANOG-201ENST00000229307 DAXXQ9UER7 740 aaPredicted RBP10.87□□□□□ -0.67
NANOG-201ENST00000229307 CANXP27824 592 aaKnown RBP10.86□□□□□ -0.67
NANOG-201ENST00000229307 TEX14Q8IWB6 1497 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms