RNA–Protein interactions for RNA: ENST00000228425.10

PPFIBP1-201, Transcript of PPFIA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIBP1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-201ENST00000228425 PAXIP1Q6ZW49 1069 aaPredicted RBP8.4□□□□□ -1.06
PPFIBP1-201ENST00000228425 UBTFP17480 764 aaKnown RBP8.39□□□□□ -1.07
PPFIBP1-201ENST00000228425 LRRIQ1Q96JM4 1722 aa8.38□□□□□ -1.07
PPFIBP1-201ENST00000228425 SYNJ1O43426 1573 aa8.38□□□□□ -1.07
PPFIBP1-201ENST00000228425 ADRA2BP18089 450 aa8.33□□□□□ -1.08
PPFIBP1-201ENST00000228425 CCDC88BA6NC98 1476 aa8.33□□□□□ -1.08
PPFIBP1-201ENST00000228425 DNAJC5BQ9UF47 199 aa8.32□□□□□ -1.08
PPFIBP1-201ENST00000228425 TARBP1Q13395 1621 aaKnown RBP8.32□□□□□ -1.08
PPFIBP1-201ENST00000228425 PDIA4P13667 645 aaKnown RBP8.3□□□□□ -1.08
PPFIBP1-201ENST00000228425 CFTRP13569 1480 aa8.3□□□□□ -1.08
PPFIBP1-201ENST00000228425 BCL11AQ9H165 835 aa8.3□□□□□ -1.08
PPFIBP1-201ENST00000228425 CC2D2AQ9P2K1 1620 aa8.29□□□□□ -1.08
PPFIBP1-201ENST00000228425 NEFMP07197 916 aa8.28□□□□□ -1.08
PPFIBP1-201ENST00000228425 HSP90B1P14625 803 aaKnown RBP8.28□□□□□ -1.08
PPFIBP1-201ENST00000228425 TOP2BQ02880 1626 aa8.28□□□□□ -1.08
PPFIBP1-201ENST00000228425 PLEKHG5O94827 1062 aa8.27□□□□□ -1.08
PPFIBP1-201ENST00000228425 ARID4BQ4LE39 1312 aaPredicted RBP8.27□□□□□ -1.09
PPFIBP1-201ENST00000228425 THOC2Q8NI27 1593 aaKnown RBP8.26□□□□□ -1.09
PPFIBP1-201ENST00000228425 ZNF326Q5BKZ1 582 aaKnown RBP8.25□□□□□ -1.09
PPFIBP1-201ENST00000228425 ITGAEP38570 1179 aa8.25□□□□□ -1.09
PPFIBP1-201ENST00000228425 ERCC6Q03468 1493 aa8.24□□□□□ -1.09
PPFIBP1-201ENST00000228425 PPARGC1BQ86YN6 1023 aaKnown RBP8.24□□□□□ -1.09
PPFIBP1-201ENST00000228425 ABCA5Q8WWZ7 1642 aa8.24□□□□□ -1.09
PPFIBP1-201ENST00000228425 PDE4CQ08493 712 aa8.23□□□□□ -1.09
PPFIBP1-201ENST00000228425 CANXP27824 592 aaKnown RBP8.23□□□□□ -1.09
PPFIBP1-201ENST00000228425 USP35Q9P2H5 1018 aa8.22□□□□□ -1.09
PPFIBP1-201ENST00000228425 CUX1P39880 1505 aa8.21□□□□□ -1.09
PPFIBP1-201ENST00000228425 ANP32BQ92688 251 aaKnown RBP8.2□□□□□ -1.1
PPFIBP1-201ENST00000228425 FBLN2P98095 1184 aa8.19□□□□□ -1.1
PPFIBP1-201ENST00000228425 KIF21AQ7Z4S6 1674 aa8.18□□□□□ -1.1
PPFIBP1-201ENST00000228425 GLIPR1L2Q4G1C9 344 aa8.17□□□□□ -1.1
PPFIBP1-201ENST00000228425 BRD2P25440 801 aaKnown RBP8.16□□□□□ -1.1
PPFIBP1-201ENST00000228425 A0A0U1RQG5 324 aaPredicted RBP8.16□□□□□ -1.1
PPFIBP1-201ENST00000228425 CHMP4AQ9BY43 222 aa8.15□□□□□ -1.1
PPFIBP1-201ENST00000228425 CUX2O14529 1486 aa8.15□□□□□ -1.11
PPFIBP1-201ENST00000228425 DIEXFQ68CQ4 756 aaKnown RBP8.14□□□□□ -1.11
PPFIBP1-201ENST00000228425 RUSC2Q8N2Y8 1516 aa8.13□□□□□ -1.11
PPFIBP1-201ENST00000228425 FOXD4L1Q9NU39 408 aa8.13□□□□□ -1.11
PPFIBP1-201ENST00000228425 BAZ1BQ9UIG0 1483 aaKnown RBP8.13□□□□□ -1.11
PPFIBP1-201ENST00000228425 ABCC8Q09428 1581 aa8.13□□□□□ -1.11
PPFIBP1-201ENST00000228425 PTMSP20962 102 aa8.12□□□□□ -1.11
PPFIBP1-201ENST00000228425 PPP4R3CPQ6ZMV5 832 aa8.12□□□□□ -1.11
PPFIBP1-201ENST00000228425 ZNF526Q8TF50 670 aaPredicted RBP8.12□□□□□ -1.11
PPFIBP1-201ENST00000228425 PRXQ9BXM0 1461 aa8.1□□□□□ -1.11
PPFIBP1-201ENST00000228425 TAF7LQ5H9L4 462 aa8.1□□□□□ -1.11
PPFIBP1-201ENST00000228425 ESF1Q9H501 851 aaKnown RBP8.1□□□□□ -1.11
PPFIBP1-201ENST00000228425 PPM1GO15355 546 aaPredicted RBP8.09□□□□□ -1.11
PPFIBP1-201ENST00000228425 HSP90AA1P07900 732 aaKnown RBP8.09□□□□□ -1.11
PPFIBP1-201ENST00000228425 NPM3O75607 178 aaKnown RBP8.08□□□□□ -1.12
PPFIBP1-201ENST00000228425 SPRYD3Q8NCJ5 442 aa8.08□□□□□ -1.12
PPFIBP1-201ENST00000228425 PDS5BQ9NTI5 1447 aa8.08□□□□□ -1.12
PPFIBP1-201ENST00000228425 A0A0G2JS52 829 aa8.08□□□□□ -1.12
PPFIBP1-201ENST00000228425 RBM25P49756 843 aaKnown RBP8.08□□□□□ -1.12
PPFIBP1-201ENST00000228425 NEUROD2Q15784 382 aa8.08□□□□□ -1.12
PPFIBP1-201ENST00000228425 TRIM52Q96A61 297 aa8.08□□□□□ -1.12
PPFIBP1-201ENST00000228425 AEBP1Q8IUX7 1158 aa8.08□□□□□ -1.12
PPFIBP1-201ENST00000228425 UBE2Q2Q8WVN8 375 aa8.07□□□□□ -1.12
PPFIBP1-201ENST00000228425 KDM2AQ9Y2K7 1162 aa8.07□□□□□ -1.12
PPFIBP1-201ENST00000228425 URB2Q14146 1524 aaKnown RBP8.07□□□□□ -1.12
PPFIBP1-201ENST00000228425 SENP3Q9H4L4 574 aaPredicted RBP8.07□□□□□ -1.12
PPFIBP1-201ENST00000228425 RAD21O60216 631 aa8.06□□□□□ -1.12
PPFIBP1-201ENST00000228425 NPM1P06748 294 aaKnown RBP eCLIP8.06□□□□□ -1.12
PPFIBP1-201ENST00000228425 KIF21BO75037 1637 aa8.06□□□□□ -1.12
PPFIBP1-201ENST00000228425 ZBTB22O15209 634 aa8.05□□□□□ -1.12
PPFIBP1-201ENST00000228425 DHX37Q8IY37 1157 aaKnown RBP8.05□□□□□ -1.12
PPFIBP1-201ENST00000228425 EEA1Q15075 1411 aa8.05□□□□□ -1.12
PPFIBP1-201ENST00000228425 LAMC3Q9Y6N6 1575 aa8.04□□□□□ -1.12
PPFIBP1-201ENST00000228425 WDR62O43379 1518 aa8.03□□□□□ -1.12
PPFIBP1-201ENST00000228425 SAMD9Q5K651 1589 aa8.03□□□□□ -1.12
PPFIBP1-201ENST00000228425 SCAF1Q9H7N4 1312 aaKnown RBP8.02□□□□□ -1.12
PPFIBP1-201ENST00000228425 SHROOM2Q13796 1616 aa8.02□□□□□ -1.13
PPFIBP1-201ENST00000228425 PKNOX2Q96KN3 472 aa8.02□□□□□ -1.13
PPFIBP1-201ENST00000228425 ACIN1Q9UKV3 1341 aaKnown RBP8.02□□□□□ -1.13
PPFIBP1-201ENST00000228425 KCTD17Q8N5Z5 321 aa8.01□□□□□ -1.13
PPFIBP1-201ENST00000228425 TSHZ2Q9NRE2 1034 aa8.01□□□□□ -1.13
PPFIBP1-201ENST00000228425 PSMD1Q99460 953 aa8.01□□□□□ -1.13
PPFIBP1-201ENST00000228425 STAG3Q9UJ98 1225 aa7.99□□□□□ -1.13
PPFIBP1-201ENST00000228425 NAP1L5Q96NT1 182 aaPredicted RBP7.99□□□□□ -1.13
PPFIBP1-201ENST00000228425 ARHGEF11O15085 1522 aa7.98□□□□□ -1.13
PPFIBP1-201ENST00000228425 RSPH6AQ9H0K4 717 aa7.98□□□□□ -1.13
PPFIBP1-201ENST00000228425 NESP48681 1621 aa7.98□□□□□ -1.13
PPFIBP1-201ENST00000228425 ANP32AP39687 249 aaKnown RBP7.97□□□□□ -1.13
PPFIBP1-201ENST00000228425 UPF2Q9HAU5 1272 aaKnown RBP7.97□□□□□ -1.13
PPFIBP1-201ENST00000228425 FAM50AQ14320 339 aaKnown RBP7.97□□□□□ -1.13
PPFIBP1-201ENST00000228425 ABCA10Q8WWZ4 1543 aa7.95□□□□□ -1.14
PPFIBP1-201ENST00000228425 ECM2O94769 699 aaPredicted RBP7.94□□□□□ -1.14
PPFIBP1-201ENST00000228425 BBXQ8WY36 941 aaPredicted RBP7.94□□□□□ -1.14
PPFIBP1-201ENST00000228425 CHMP7Q8WUX9 453 aaPredicted RBP7.93□□□□□ -1.14
PPFIBP1-201ENST00000228425 TNIKQ9UKE5 1360 aa7.93□□□□□ -1.14
PPFIBP1-201ENST00000228425 DNMBPQ6XZF7 1577 aa7.93□□□□□ -1.14
PPFIBP1-201ENST00000228425 ANP32CO43423 234 aa7.93□□□□□ -1.14
PPFIBP1-201ENST00000228425 PRM3Q9NNZ6 103 aa7.92□□□□□ -1.14
PPFIBP1-201ENST00000228425 ERICH3Q5RHP9 1530 aa7.92□□□□□ -1.14
PPFIBP1-201ENST00000228425 CCDC136Q96JN2 1154 aa7.92□□□□□ -1.14
PPFIBP1-201ENST00000228425 DENND4BO75064 1496 aaPredicted RBP7.91□□□□□ -1.14
PPFIBP1-201ENST00000228425 KRI1Q8N9T8 703 aaKnown RBP7.91□□□□□ -1.14
PPFIBP1-201ENST00000228425 CNKSR2Q8WXI2 1034 aa7.91□□□□□ -1.14
PPFIBP1-201ENST00000228425 WDR70Q9NW82 654 aa7.91□□□□□ -1.14
PPFIBP1-201ENST00000228425 NEUROD1Q13562 356 aa7.91□□□□□ -1.14
PPFIBP1-201ENST00000228425 PBRM1Q86U86 1689 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms