RNA–Protein interactions for RNA: ENST00000227474.7

PUS3-201, Transcript of pseudouridylate synthase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUS3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUS3-201ENST00000227474 CADPSQ9ULU8 1353 aa13.12□□□□□ -0.31
PUS3-201ENST00000227474 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
PUS3-201ENST00000227474 PRXQ9BXM0 1461 aa13.12□□□□□ -0.31
PUS3-201ENST00000227474 RAPGEF2Q9Y4G8 1499 aa13.12□□□□□ -0.31
PUS3-201ENST00000227474 CACNB1Q02641 598 aaPredicted RBP13.11□□□□□ -0.31
PUS3-201ENST00000227474 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
PUS3-201ENST00000227474 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
PUS3-201ENST00000227474 ZBTB22O15209 634 aa13.09□□□□□ -0.31
PUS3-201ENST00000227474 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
PUS3-201ENST00000227474 CLIP1P30622 1438 aa13.08□□□□□ -0.32
PUS3-201ENST00000227474 KIF27Q86VH2 1401 aa13.06□□□□□ -0.32
PUS3-201ENST00000227474 UBE2Q2Q8WVN8 375 aa13.05□□□□□ -0.32
PUS3-201ENST00000227474 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
PUS3-201ENST00000227474 CHMP4AQ9BY43 222 aa13.04□□□□□ -0.32
PUS3-201ENST00000227474 FANCD2Q9BXW9 1451 aa12.96□□□□□ -0.33
PUS3-201ENST00000227474 SAMD1Q6SPF0 538 aaPredicted RBP12.95□□□□□ -0.34
PUS3-201ENST00000227474 IGF1RP08069 1367 aa12.95□□□□□ -0.34
PUS3-201ENST00000227474 FGD5Q6ZNL6 1462 aa12.95□□□□□ -0.34
PUS3-201ENST00000227474 FBLN2P98095 1184 aa12.95□□□□□ -0.34
PUS3-201ENST00000227474 CUX2O14529 1486 aa12.94□□□□□ -0.34
PUS3-201ENST00000227474 ARAP1Q96P48 1450 aa12.94□□□□□ -0.34
PUS3-201ENST00000227474 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
PUS3-201ENST00000227474 DNMBPQ6XZF7 1577 aa12.91□□□□□ -0.34
PUS3-201ENST00000227474 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
PUS3-201ENST00000227474 PDE4CQ08493 712 aa12.88□□□□□ -0.35
PUS3-201ENST00000227474 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.88□□□□□ -0.35
PUS3-201ENST00000227474 TOPBP1Q92547 1522 aa12.87□□□□□ -0.35
PUS3-201ENST00000227474 PPP6R1Q9UPN7 881 aa12.87□□□□□ -0.35
PUS3-201ENST00000227474 ABCA10Q8WWZ4 1543 aa12.87□□□□□ -0.35
PUS3-201ENST00000227474 NESP48681 1621 aa12.87□□□□□ -0.35
PUS3-201ENST00000227474 CARMIL1Q5VZK9 1371 aa12.86□□□□□ -0.35
PUS3-201ENST00000227474 ARHGAP35Q9NRY4 1499 aa12.86□□□□□ -0.35
PUS3-201ENST00000227474 CDK11BP21127 795 aaKnown RBP12.85□□□□□ -0.35
PUS3-201ENST00000227474 CCER1Q8TC90 406 aaPredicted RBP12.85□□□□□ -0.35
PUS3-201ENST00000227474 CDK11AQ9UQ88 783 aaPredicted RBP12.85□□□□□ -0.35
PUS3-201ENST00000227474 FKBP8Q14318 412 aa12.85□□□□□ -0.35
PUS3-201ENST00000227474 POLA1P09884 1462 aaPredicted RBP12.84□□□□□ -0.35
PUS3-201ENST00000227474 DHX37Q8IY37 1157 aaKnown RBP12.82□□□□□ -0.36
PUS3-201ENST00000227474 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
PUS3-201ENST00000227474 BRD2P25440 801 aaKnown RBP12.8□□□□□ -0.36
PUS3-201ENST00000227474 URB2Q14146 1524 aaKnown RBP12.79□□□□□ -0.36
PUS3-201ENST00000227474 IGSF3O75054 1194 aa12.78□□□□□ -0.36
PUS3-201ENST00000227474 PDS5BQ9NTI5 1447 aa12.78□□□□□ -0.36
PUS3-201ENST00000227474 MAP3K1Q13233 1512 aa12.77□□□□□ -0.37
PUS3-201ENST00000227474 WDR97A6NE52 1622 aa12.74□□□□□ -0.37
PUS3-201ENST00000227474 KANK4Q5T7N3 995 aaPredicted RBP12.74□□□□□ -0.37
PUS3-201ENST00000227474 CUL7Q14999 1698 aa12.74□□□□□ -0.37
PUS3-201ENST00000227474 TAF7LQ5H9L4 462 aa12.74□□□□□ -0.37
PUS3-201ENST00000227474 DNAJC5BQ9UF47 199 aa12.74□□□□□ -0.37
PUS3-201ENST00000227474 RRBP1Q9P2E9 1410 aaKnown RBP12.73□□□□□ -0.37
PUS3-201ENST00000227474 NEFLP07196 543 aa12.71□□□□□ -0.38
PUS3-201ENST00000227474 HNRNPUL2Q1KMD3 747 aaKnown RBP12.71□□□□□ -0.38
PUS3-201ENST00000227474 ABCA5Q8WWZ7 1642 aa12.71□□□□□ -0.38
PUS3-201ENST00000227474 ADRA2BP18089 450 aa12.69□□□□□ -0.38
PUS3-201ENST00000227474 EFCAB5A4FU69 1503 aa12.69□□□□□ -0.38
PUS3-201ENST00000227474 FHAD1B1AJZ9 1412 aa12.68□□□□□ -0.38
PUS3-201ENST00000227474 TIAM1Q13009 1591 aa12.67□□□□□ -0.38
PUS3-201ENST00000227474 AQRO60306 1485 aaKnown RBP eCLIP12.66□□□□□ -0.38
PUS3-201ENST00000227474 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
PUS3-201ENST00000227474 PKNOX2Q96KN3 472 aa12.65□□□□□ -0.38
PUS3-201ENST00000227474 KIF21AQ7Z4S6 1674 aa12.65□□□□□ -0.39
PUS3-201ENST00000227474 HSP90B1P14625 803 aaKnown RBP12.65□□□□□ -0.39
PUS3-201ENST00000227474 TARBP1Q13395 1621 aaKnown RBP12.64□□□□□ -0.39
PUS3-201ENST00000227474 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
PUS3-201ENST00000227474 LRRC9Q6ZRR7 1453 aa12.63□□□□□ -0.39
PUS3-201ENST00000227474 CCNB3Q8WWL7 1395 aa12.63□□□□□ -0.39
PUS3-201ENST00000227474 CLSPNQ9HAW4 1339 aa12.62□□□□□ -0.39
PUS3-201ENST00000227474 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
PUS3-201ENST00000227474 CASKIN1Q8WXD9 1431 aa12.61□□□□□ -0.39
PUS3-201ENST00000227474 CTTNBP2Q8WZ74 1663 aa12.61□□□□□ -0.39
PUS3-201ENST00000227474 PCF11O94913 1555 aaKnown RBP12.61□□□□□ -0.39
PUS3-201ENST00000227474 CFAP43Q8NDM7 1665 aa12.6□□□□□ -0.39
PUS3-201ENST00000227474 MRC2Q9UBG0 1479 aa12.6□□□□□ -0.39
PUS3-201ENST00000227474 FHOD3Q2V2M9 1422 aa12.6□□□□□ -0.39
PUS3-201ENST00000227474 HMGB1P09429 215 aaKnown RBP12.6□□□□□ -0.39
PUS3-201ENST00000227474 SAMD9Q5K651 1589 aa12.58□□□□□ -0.39
PUS3-201ENST00000227474 DHX57Q6P158 1386 aaKnown RBP12.57□□□□□ -0.4
PUS3-201ENST00000227474 FMN1Q68DA7 1419 aa12.57□□□□□ -0.4
PUS3-201ENST00000227474 BCL11BQ9C0K0 894 aaPredicted RBP12.57□□□□□ -0.4
PUS3-201ENST00000227474 CCDC9Q9Y3X0 531 aaKnown RBP12.57□□□□□ -0.4
PUS3-201ENST00000227474 SNAPC4Q5SXM2 1469 aa12.56□□□□□ -0.4
PUS3-201ENST00000227474 PHLDB1Q86UU1 1377 aa12.55□□□□□ -0.4
PUS3-201ENST00000227474 P3H3Q8IVL6 736 aa12.55□□□□□ -0.4
PUS3-201ENST00000227474 NPM3O75607 178 aaKnown RBP12.54□□□□□ -0.4
PUS3-201ENST00000227474 WDR62O43379 1518 aa12.53□□□□□ -0.4
PUS3-201ENST00000227474 ZNF316A6NFI3 1004 aaPredicted RBP12.53□□□□□ -0.4
PUS3-201ENST00000227474 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.52□□□□□ -0.4
PUS3-201ENST00000227474 IFT140Q96RY7 1462 aa12.51□□□□□ -0.41
PUS3-201ENST00000227474 ADAMTS12P58397 1594 aa12.51□□□□□ -0.41
PUS3-201ENST00000227474 GRIN2BQ13224 1484 aa12.51□□□□□ -0.41
PUS3-201ENST00000227474 PUS7Q96PZ0 661 aaKnown RBP12.51□□□□□ -0.41
PUS3-201ENST00000227474 THOC2Q8NI27 1593 aaKnown RBP12.5□□□□□ -0.41
PUS3-201ENST00000227474 PBRM1Q86U86 1689 aa12.5□□□□□ -0.41
PUS3-201ENST00000227474 DIEXFQ68CQ4 756 aaKnown RBP12.5□□□□□ -0.41
PUS3-201ENST00000227474 CFAP44Q96MT7 982 aa12.48□□□□□ -0.41
PUS3-201ENST00000227474 SETD5Q9C0A6 1442 aa12.46□□□□□ -0.42
PUS3-201ENST00000227474 FGD1P98174 961 aa12.46□□□□□ -0.42
PUS3-201ENST00000227474 RAB3GAP2Q9H2M9 1393 aa12.45□□□□□ -0.42
PUS3-201ENST00000227474 POTEHQ6S545 545 aa12.45□□□□□ -0.42
PUS3-201ENST00000227474 IQGAP2Q13576 1575 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms