RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 CUL7Q14999 1698 aa31.18■■■□□ 2.58
CCDC130-201ENST00000221554 CCNB3Q8WWL7 1395 aa31.15■■■□□ 2.58
CCDC130-201ENST00000221554 TIAM1Q13009 1591 aa31.14■■■□□ 2.58
CCDC130-201ENST00000221554 EFCAB5A4FU69 1503 aa31.1■■■□□ 2.57
CCDC130-201ENST00000221554 RAD54L2Q9Y4B4 1467 aa31.1■■■□□ 2.57
CCDC130-201ENST00000221554 DHX57Q6P158 1386 aaKnown RBP31.05■■■□□ 2.56
CCDC130-201ENST00000221554 TARBP1Q13395 1621 aaKnown RBP31.03■■■□□ 2.56
CCDC130-201ENST00000221554 LRRC9Q6ZRR7 1453 aa31.01■■■□□ 2.56
CCDC130-201ENST00000221554 WDR97A6NE52 1622 aa31■■■□□ 2.55
CCDC130-201ENST00000221554 AQRO60306 1485 aaKnown RBP eCLIP30.99■■■□□ 2.553e-6■■■■□ 20.5
CCDC130-201ENST00000221554 CFAP43Q8NDM7 1665 aa30.97■■■□□ 2.55
CCDC130-201ENST00000221554 CENPBP07199 599 aaPredicted RBP30.97■■■□□ 2.55
CCDC130-201ENST00000221554 CTTNBP2Q8WZ74 1663 aa30.96■■■□□ 2.55
CCDC130-201ENST00000221554 IFT140Q96RY7 1462 aa30.95■■■□□ 2.54
CCDC130-201ENST00000221554 FYCO1Q9BQS8 1478 aa30.94■■■□□ 2.54
CCDC130-201ENST00000221554 ZNF608Q9ULD9 1512 aaPredicted RBP30.9■■■□□ 2.54
CCDC130-201ENST00000221554 ACIN1Q9UKV3 1341 aaKnown RBP30.9■■■□□ 2.54
CCDC130-201ENST00000221554 ABCA5Q8WWZ7 1642 aa30.9■■■□□ 2.54
CCDC130-201ENST00000221554 CASKIN1Q8WXD9 1431 aa30.89■■■□□ 2.54
CCDC130-201ENST00000221554 PCF11O94913 1555 aaKnown RBP30.89■■■□□ 2.54
CCDC130-201ENST00000221554 FMN1Q68DA7 1419 aa30.86■■■□□ 2.53
CCDC130-201ENST00000221554 SCAF1Q9H7N4 1312 aaKnown RBP30.85■■■□□ 2.53
CCDC130-201ENST00000221554 GAPVD1Q14C86 1478 aa30.83■■■□□ 2.53
CCDC130-201ENST00000221554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.81■■■□□ 2.52
CCDC130-201ENST00000221554 EIF4G3O43432 1585 aaKnown RBP30.8■■■□□ 2.52
CCDC130-201ENST00000221554 FHOD3Q2V2M9 1422 aa30.8■■■□□ 2.52
CCDC130-201ENST00000221554 TDRD9Q8NDG6 1382 aaKnown RBP30.77■■■□□ 2.52
CCDC130-201ENST00000221554 PHLDB1Q86UU1 1377 aa30.76■■■□□ 2.51
CCDC130-201ENST00000221554 SETD5Q9C0A6 1442 aa30.75■■■□□ 2.51
CCDC130-201ENST00000221554 P3H3Q8IVL6 736 aa30.74■■■□□ 2.51
CCDC130-201ENST00000221554 RAB3GAP2Q9H2M9 1393 aa30.72■■■□□ 2.51
CCDC130-201ENST00000221554 SAMD9Q5K651 1589 aa30.71■■■□□ 2.51
CCDC130-201ENST00000221554 NEUROD1Q13562 356 aa30.69■■■□□ 2.5
CCDC130-201ENST00000221554 ITGAEP38570 1179 aa30.67■■■□□ 2.5
CCDC130-201ENST00000221554 PBRM1Q86U86 1689 aa30.66■■■□□ 2.5
CCDC130-201ENST00000221554 ATP1B4Q9UN42 357 aaPredicted RBP30.65■■■□□ 2.5
CCDC130-201ENST00000221554 SNAPC4Q5SXM2 1469 aa30.65■■■□□ 2.5
CCDC130-201ENST00000221554 FAM50AQ14320 339 aaKnown RBP30.6■■■□□ 2.49
CCDC130-201ENST00000221554 MIER1Q8N108 512 aa30.57■■■□□ 2.48
CCDC130-201ENST00000221554 TIMELESSQ9UNS1 1208 aa30.54■■■□□ 2.48
CCDC130-201ENST00000221554 MAPKBP1O60336 1514 aa30.53■■■□□ 2.48
CCDC130-201ENST00000221554 GRIN2BQ13224 1484 aa30.52■■■□□ 2.48
CCDC130-201ENST00000221554 MTUS2Q5JR59 1369 aa30.52■■■□□ 2.48
CCDC130-201ENST00000221554 FGD6Q6ZV73 1430 aa30.5■■■□□ 2.47
CCDC130-201ENST00000221554 CCDC18Q5T9S5 1454 aa30.46■■■□□ 2.47
CCDC130-201ENST00000221554 EHBP1L1Q8N3D4 1523 aa30.44■■■□□ 2.46
CCDC130-201ENST00000221554 PELP1Q8IZL8 1130 aaKnown RBP30.43■■■□□ 2.46
CCDC130-201ENST00000221554 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
CCDC130-201ENST00000221554 CHD1O14646 1710 aa30.41■■■□□ 2.46
CCDC130-201ENST00000221554 SUPT6HQ7KZ85 1726 aaKnown RBP30.41■■■□□ 2.46
CCDC130-201ENST00000221554 IQGAP2Q13576 1575 aa30.39■■■□□ 2.46
CCDC130-201ENST00000221554 GTF3C3Q9Y5Q9 886 aa30.38■■■□□ 2.45
CCDC130-201ENST00000221554 MAGI1Q96QZ7 1491 aaPredicted RBP30.38■■■□□ 2.45
CCDC130-201ENST00000221554 MYOM3Q5VTT5 1437 aa30.37■■■□□ 2.45
CCDC130-201ENST00000221554 NCOA2Q15596 1464 aa30.36■■■□□ 2.45
CCDC130-201ENST00000221554 LRRIQ1Q96JM4 1722 aa30.36■■■□□ 2.45
CCDC130-201ENST00000221554 HECW1Q76N89 1606 aa30.34■■■□□ 2.45
CCDC130-201ENST00000221554 HFM1A2PYH4 1435 aa30.31■■■□□ 2.44
CCDC130-201ENST00000221554 ARHGEF11O15085 1522 aa30.3■■■□□ 2.44
CCDC130-201ENST00000221554 UGGT2Q9NYU1 1516 aa30.29■■■□□ 2.44
CCDC130-201ENST00000221554 SYNJ2O15056 1496 aa30.27■■■□□ 2.44
CCDC130-201ENST00000221554 FBLN2P98095 1184 aa30.26■■■□□ 2.43
CCDC130-201ENST00000221554 YTHDC1Q96MU7 727 aaKnown RBP30.26■■■□□ 2.43
CCDC130-201ENST00000221554 UACAQ9BZF9 1416 aa30.22■■■□□ 2.43
CCDC130-201ENST00000221554 PTPN23Q9H3S7 1636 aa30.21■■■□□ 2.43
CCDC130-201ENST00000221554 TCOF1Q13428 1488 aaKnown RBP30.2■■■□□ 2.43
CCDC130-201ENST00000221554 CHMP7Q8WUX9 453 aaPredicted RBP30.2■■■□□ 2.42
CCDC130-201ENST00000221554 EPRSP07814 1512 aaKnown RBP30.18■■■□□ 2.42
CCDC130-201ENST00000221554 KIAA0586Q9BVV6 1533 aa30.18■■■□□ 2.42
CCDC130-201ENST00000221554 GRIN2AQ12879 1464 aa30.17■■■□□ 2.42
CCDC130-201ENST00000221554 MIA2Q96PC5 1412 aa30.16■■■□□ 2.42
CCDC130-201ENST00000221554 SIN3AQ96ST3 1273 aa30.15■■■□□ 2.42
CCDC130-201ENST00000221554 PTPRKQ15262 1439 aa30.15■■■□□ 2.42
CCDC130-201ENST00000221554 NAIPQ13075 1403 aa30.14■■■□□ 2.42
CCDC130-201ENST00000221554 MAGI3Q5TCQ9 1506 aa30.13■■■□□ 2.41
CCDC130-201ENST00000221554 AKNAQ7Z591 1439 aa30.12■■■□□ 2.41
CCDC130-201ENST00000221554 PPP1R15AO75807 674 aaPredicted RBP30.11■■■□□ 2.41
CCDC130-201ENST00000221554 CEP170Q5SW79 1584 aa30.07■■■□□ 2.4
CCDC130-201ENST00000221554 KIAA0556O60303 1618 aa30.04■■■□□ 2.4
CCDC130-201ENST00000221554 OSCARQ8IYS5 282 aa30.04■■■□□ 2.4
CCDC130-201ENST00000221554 TONSLQ96HA7 1378 aa30.03■■■□□ 2.4
CCDC130-201ENST00000221554 GCC2Q8IWJ2 1684 aa30.02■■■□□ 2.4
CCDC130-201ENST00000221554 DISP1Q96F81 1524 aa29.99■■■□□ 2.39
CCDC130-201ENST00000221554 NUP160Q12769 1436 aa29.99■■■□□ 2.39
CCDC130-201ENST00000221554 CDK11AQ9UQ88 783 aaPredicted RBP29.97■■■□□ 2.39
CCDC130-201ENST00000221554 CDK13Q14004 1512 aaKnown RBP29.97■■■□□ 2.39
CCDC130-201ENST00000221554 CLASP1Q7Z460 1538 aa29.96■■■□□ 2.39
CCDC130-201ENST00000221554 RAPGEF6Q8TEU7 1601 aa29.92■■■□□ 2.38
CCDC130-201ENST00000221554 ROCK1Q13464 1354 aa29.89■■■□□ 2.37
CCDC130-201ENST00000221554 NUP153P49790 1475 aaKnown RBP29.87■■■□□ 2.37
CCDC130-201ENST00000221554 RRP7BPQ9NSQ0 103 aa29.82■■■□□ 2.36
CCDC130-201ENST00000221554 CARMIL2Q6F5E8 1435 aa29.8■■■□□ 2.36
CCDC130-201ENST00000221554 DDX10Q13206 875 aaKnown RBP29.8■■■□□ 2.36
CCDC130-201ENST00000221554 DAPK1P53355 1430 aa29.78■■■□□ 2.36
CCDC130-201ENST00000221554 CHIC2Q9UKJ5 165 aa29.78■■■□□ 2.36
CCDC130-201ENST00000221554 DNMT1P26358 1616 aaKnown RBP29.78■■■□□ 2.36
CCDC130-201ENST00000221554 SHROOM2Q13796 1616 aa29.78■■■□□ 2.36
CCDC130-201ENST00000221554 TROQ12816 1431 aaPredicted RBP29.76■■■□□ 2.35
CCDC130-201ENST00000221554 TRIM52Q96A61 297 aa29.75■■■□□ 2.35
CCDC130-201ENST00000221554 CCER2I3L3R5 266 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms