RNA–Protein interactions for RNA: ENST00000164227.9

BCL3-201, Transcript of B cell CLL/lymphoma 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCL3, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3-201ENST00000164227 CFAP43Q8NDM7 1665 aa38.98■■■■□ 3.83
BCL3-201ENST00000164227 TOPBP1Q92547 1522 aa38.9■■■■□ 3.82
BCL3-201ENST00000164227 CUL7Q14999 1698 aa38.89■■■■□ 3.82
BCL3-201ENST00000164227 EFCAB5A4FU69 1503 aa38.88■■■■□ 3.81
BCL3-201ENST00000164227 POLA1P09884 1462 aaPredicted RBP38.85■■■■□ 3.81
BCL3-201ENST00000164227 PCF11O94913 1555 aaKnown RBP38.84■■■■□ 3.81
BCL3-201ENST00000164227 RAB3GAP2Q9H2M9 1393 aa38.8■■■■□ 3.8
BCL3-201ENST00000164227 AQRO60306 1485 aaKnown RBP eCLIP38.79■■■■□ 3.89e-7■■■■■ 28.6
BCL3-201ENST00000164227 YTHDC1Q96MU7 727 aaKnown RBP38.79■■■■□ 3.8
BCL3-201ENST00000164227 RAD54L2Q9Y4B4 1467 aa38.78■■■■□ 3.8
BCL3-201ENST00000164227 FYCO1Q9BQS8 1478 aa38.77■■■■□ 3.8
BCL3-201ENST00000164227 CTTNBP2Q8WZ74 1663 aa38.77■■■■□ 3.8
BCL3-201ENST00000164227 PHLDB1Q86UU1 1377 aa38.75■■■■□ 3.79
BCL3-201ENST00000164227 SETD5Q9C0A6 1442 aa38.75■■■■□ 3.79
BCL3-201ENST00000164227 MAPKBP1O60336 1514 aa38.73■■■■□ 3.79
BCL3-201ENST00000164227 WDR97A6NE52 1622 aa38.71■■■■□ 3.79
BCL3-201ENST00000164227 CASKIN1Q8WXD9 1431 aa38.7■■■■□ 3.79
BCL3-201ENST00000164227 LAMC3Q9Y6N6 1575 aa38.7■■■■□ 3.79
BCL3-201ENST00000164227 ITGAEP38570 1179 aa38.67■■■■□ 3.78
BCL3-201ENST00000164227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.66■■■■□ 3.78
BCL3-201ENST00000164227 NESP48681 1621 aa38.64■■■■□ 3.78
BCL3-201ENST00000164227 FHOD3Q2V2M9 1422 aa38.62■■■■□ 3.77
BCL3-201ENST00000164227 FMN1Q68DA7 1419 aa38.54■■■■□ 3.76
BCL3-201ENST00000164227 URB2Q14146 1524 aaKnown RBP38.53■■■■□ 3.76
BCL3-201ENST00000164227 ABCA5Q8WWZ7 1642 aa38.52■■■■□ 3.76
BCL3-201ENST00000164227 P3H3Q8IVL6 736 aa38.51■■■■□ 3.76
BCL3-201ENST00000164227 FAM50AQ14320 339 aaKnown RBP38.46■■■■□ 3.75
BCL3-201ENST00000164227 SAMD9Q5K651 1589 aa38.46■■■■□ 3.75
BCL3-201ENST00000164227 SNAPC4Q5SXM2 1469 aa38.45■■■■□ 3.75
BCL3-201ENST00000164227 TIMELESSQ9UNS1 1208 aa38.43■■■■□ 3.74
BCL3-201ENST00000164227 THOC2Q8NI27 1593 aaKnown RBP38.35■■■■□ 3.73
BCL3-201ENST00000164227 ATP1B4Q9UN42 357 aaPredicted RBP38.35■■■■□ 3.73
BCL3-201ENST00000164227 PDS5BQ9NTI5 1447 aa38.35■■■■□ 3.73
BCL3-201ENST00000164227 GAPVD1Q14C86 1478 aa38.34■■■■□ 3.73
BCL3-201ENST00000164227 FGD6Q6ZV73 1430 aa38.33■■■■□ 3.73
BCL3-201ENST00000164227 KIF21AQ7Z4S6 1674 aa38.27■■■■□ 3.72
BCL3-201ENST00000164227 GRIN2BQ13224 1484 aa38.25■■■■□ 3.71
BCL3-201ENST00000164227 LRRIQ1Q96JM4 1722 aa38.24■■■■□ 3.71
BCL3-201ENST00000164227 TDRD9Q8NDG6 1382 aaKnown RBP38.23■■■■□ 3.71
BCL3-201ENST00000164227 MTUS2Q5JR59 1369 aa38.21■■■■□ 3.71
BCL3-201ENST00000164227 TARBP1Q13395 1621 aaKnown RBP38.16■■■■□ 3.7
BCL3-201ENST00000164227 SIN3AQ96ST3 1273 aa38.16■■■■□ 3.7
BCL3-201ENST00000164227 EHBP1L1Q8N3D4 1523 aa38.15■■■■□ 3.7
BCL3-201ENST00000164227 SUPT6HQ7KZ85 1726 aaKnown RBP38.15■■■■□ 3.7
BCL3-201ENST00000164227 HFM1A2PYH4 1435 aa38.14■■■■□ 3.7
BCL3-201ENST00000164227 MYOM3Q5VTT5 1437 aa38.11■■■■□ 3.69
BCL3-201ENST00000164227 NCOA2Q15596 1464 aa38.11■■■■□ 3.69
BCL3-201ENST00000164227 CCDC18Q5T9S5 1454 aa38.09■■■■□ 3.69
BCL3-201ENST00000164227 PTPN23Q9H3S7 1636 aa38.09■■■■□ 3.69
BCL3-201ENST00000164227 UACAQ9BZF9 1416 aa38.05■■■■□ 3.68
BCL3-201ENST00000164227 ARHGEF11O15085 1522 aa38.05■■■■□ 3.68
BCL3-201ENST00000164227 PPP1R15AO75807 674 aaPredicted RBP38.05■■■■□ 3.68
BCL3-201ENST00000164227 UGGT2Q9NYU1 1516 aa38.02■■■■□ 3.68
BCL3-201ENST00000164227 PTPRKQ15262 1439 aa38.02■■■■□ 3.68
BCL3-201ENST00000164227 PBRM1Q86U86 1689 aa38.01■■■■□ 3.68
BCL3-201ENST00000164227 NAIPQ13075 1403 aa37.96■■■■□ 3.67
BCL3-201ENST00000164227 HECW1Q76N89 1606 aa37.95■■■■□ 3.66
BCL3-201ENST00000164227 TCOF1Q13428 1488 aaKnown RBP37.91■■■■□ 3.66
BCL3-201ENST00000164227 IQGAP2Q13576 1575 aa37.89■■■■□ 3.66
BCL3-201ENST00000164227 ADAMTS12P58397 1594 aa37.89■■■■□ 3.66
BCL3-201ENST00000164227 MAGI3Q5TCQ9 1506 aa37.88■■■■□ 3.65
BCL3-201ENST00000164227 TONSLQ96HA7 1378 aa37.86■■■■□ 3.65
BCL3-201ENST00000164227 SUPT16HQ9Y5B9 1047 aaKnown RBP37.85■■■■□ 3.65
BCL3-201ENST00000164227 DDX10Q13206 875 aaKnown RBP37.84■■■■□ 3.65
BCL3-201ENST00000164227 GCC2Q8IWJ2 1684 aa37.82■■■■□ 3.64
BCL3-201ENST00000164227 AKNAQ7Z591 1439 aa37.81■■■■□ 3.64
BCL3-201ENST00000164227 EPRSP07814 1512 aaKnown RBP37.76■■■■□ 3.64
BCL3-201ENST00000164227 MRC2Q9UBG0 1479 aa37.76■■■■□ 3.64
BCL3-201ENST00000164227 CCER2I3L3R5 266 aa37.73■■■■□ 3.63
BCL3-201ENST00000164227 MIA2Q96PC5 1412 aa37.73■■■■□ 3.63
BCL3-201ENST00000164227 KCNH8Q96L42 1107 aa37.73■■■■□ 3.63
BCL3-201ENST00000164227 WDR62O43379 1518 aa37.72■■■■□ 3.63
BCL3-201ENST00000164227 KDM5BQ9UGL1 1544 aa37.68■■■■□ 3.62
BCL3-201ENST00000164227 IFT140Q96RY7 1462 aa37.59■■■■□ 3.61
BCL3-201ENST00000164227 ANP32CO43423 234 aa37.59■■■■□ 3.61
BCL3-201ENST00000164227 MYT1Q01538 1121 aa37.58■■■■□ 3.61
BCL3-201ENST00000164227 CDK13Q14004 1512 aaKnown RBP37.57■■■■□ 3.6
BCL3-201ENST00000164227 DENND4BO75064 1496 aaPredicted RBP37.53■■■■□ 3.6
BCL3-201ENST00000164227 HIRIP3Q9BW71 556 aaPredicted RBP37.52■■■■□ 3.6
BCL3-201ENST00000164227 KIAA0586Q9BVV6 1533 aa37.51■■■■□ 3.6
BCL3-201ENST00000164227 KIAA0556O60303 1618 aa37.5■■■■□ 3.59
BCL3-201ENST00000164227 RRP7BPQ9NSQ0 103 aa37.49■■■■□ 3.59
BCL3-201ENST00000164227 KDM6BO15054 1643 aa37.47■■■■□ 3.59
BCL3-201ENST00000164227 ROCK1Q13464 1354 aa37.45■■■■□ 3.59
BCL3-201ENST00000164227 DISP1Q96F81 1524 aa37.43■■■■□ 3.58
BCL3-201ENST00000164227 CHIC2Q9UKJ5 165 aa37.41■■■■□ 3.58
BCL3-201ENST00000164227 DNMT1P26358 1616 aaKnown RBP37.39■■■■□ 3.58
BCL3-201ENST00000164227 ZNF608Q9ULD9 1512 aaPredicted RBP37.39■■■■□ 3.58
BCL3-201ENST00000164227 RAPGEF6Q8TEU7 1601 aa37.37■■■■□ 3.57
BCL3-201ENST00000164227 DAPK1P53355 1430 aa37.36■■■■□ 3.57
BCL3-201ENST00000164227 TRIM52Q96A61 297 aa37.34■■■■□ 3.57
BCL3-201ENST00000164227 MPHOSPH9Q99550 1183 aa37.34■■■■□ 3.57
BCL3-201ENST00000164227 NUP153P49790 1475 aaKnown RBP37.34■■■■□ 3.57
BCL3-201ENST00000164227 GRIN2AQ12879 1464 aa37.33■■■■□ 3.57
BCL3-201ENST00000164227 EIF4G3O43432 1585 aaKnown RBP37.27■■■■□ 3.56
BCL3-201ENST00000164227 ABCC5O15440 1437 aa37.27■■■■□ 3.56
BCL3-201ENST00000164227 ERCC6Q03468 1493 aa37.25■■■■□ 3.55
BCL3-201ENST00000164227 DNAJC5Q9H3Z4 198 aa37.25■■■■□ 3.55
BCL3-201ENST00000164227 CDK11AQ9UQ88 783 aaPredicted RBP37.24■■■■□ 3.55
BCL3-201ENST00000164227 HSPA5P11021 654 aaKnown RBP37.22■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms