RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 BCL11AQ9H165 835 aa17.36■□□□□ 0.37
TSPAN9-201ENST00000011898 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
TSPAN9-201ENST00000011898 ZNF316A6NFI3 1004 aaPredicted RBP17.33■□□□□ 0.36
TSPAN9-201ENST00000011898 IGF1RP08069 1367 aa17.32■□□□□ 0.36
TSPAN9-201ENST00000011898 EIF5BO60841 1220 aaKnown RBP17.32■□□□□ 0.36
TSPAN9-201ENST00000011898 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.362e-6■■■■■ 30.1
TSPAN9-201ENST00000011898 FBLN2P98095 1184 aa17.3■□□□□ 0.36
TSPAN9-201ENST00000011898 GRIN2BQ13224 1484 aa17.3■□□□□ 0.36
TSPAN9-201ENST00000011898 MYT1LQ9UL68 1186 aa17.29■□□□□ 0.36
TSPAN9-201ENST00000011898 RAPGEF2Q9Y4G8 1499 aa17.28■□□□□ 0.36
TSPAN9-201ENST00000011898 KIF21BO75037 1637 aa17.28■□□□□ 0.36
TSPAN9-201ENST00000011898 TARBP1Q13395 1621 aaKnown RBP17.27■□□□□ 0.36
TSPAN9-201ENST00000011898 CHMP7Q8WUX9 453 aaPredicted RBP17.27■□□□□ 0.36
TSPAN9-201ENST00000011898 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
TSPAN9-201ENST00000011898 TNIKQ9UKE5 1360 aa17.26■□□□□ 0.35
TSPAN9-201ENST00000011898 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
TSPAN9-201ENST00000011898 ZNF608Q9ULD9 1512 aaPredicted RBP17.23■□□□□ 0.35
TSPAN9-201ENST00000011898 CUL7Q14999 1698 aa17.23■□□□□ 0.35
TSPAN9-201ENST00000011898 PRXQ9BXM0 1461 aa17.23■□□□□ 0.35
TSPAN9-201ENST00000011898 ABCA5Q8WWZ7 1642 aa17.22■□□□□ 0.35
TSPAN9-201ENST00000011898 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
TSPAN9-201ENST00000011898 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.35
TSPAN9-201ENST00000011898 DAXXQ9UER7 740 aaPredicted RBP17.2■□□□□ 0.34
TSPAN9-201ENST00000011898 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
TSPAN9-201ENST00000011898 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
TSPAN9-201ENST00000011898 MAGI1Q96QZ7 1491 aaPredicted RBP17.15■□□□□ 0.34
TSPAN9-201ENST00000011898 PBRM1Q86U86 1689 aa17.15■□□□□ 0.34
TSPAN9-201ENST00000011898 CEP162Q5TB80 1403 aa17.14■□□□□ 0.34
TSPAN9-201ENST00000011898 ANP32EQ9BTT0 268 aa17.14■□□□□ 0.33
TSPAN9-201ENST00000011898 CLIP1P30622 1438 aa17.13■□□□□ 0.33
TSPAN9-201ENST00000011898 ADAMTS12P58397 1594 aa17.08■□□□□ 0.33
TSPAN9-201ENST00000011898 SYNJ2O15056 1496 aa17.08■□□□□ 0.32
TSPAN9-201ENST00000011898 POLR3GLQ9BT43 218 aa17.07■□□□□ 0.32
TSPAN9-201ENST00000011898 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
TSPAN9-201ENST00000011898 CDK11AQ9UQ88 783 aaPredicted RBP17.04■□□□□ 0.32
TSPAN9-201ENST00000011898 GRIN2AQ12879 1464 aa17.02■□□□□ 0.32
TSPAN9-201ENST00000011898 P3H3Q8IVL6 736 aa17.01■□□□□ 0.31
TSPAN9-201ENST00000011898 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
TSPAN9-201ENST00000011898 KIAA0586Q9BVV6 1533 aa16.94■□□□□ 0.3
TSPAN9-201ENST00000011898 CTTNBP2Q8WZ74 1663 aa16.94■□□□□ 0.3
TSPAN9-201ENST00000011898 CARMIL2Q6F5E8 1435 aa16.92■□□□□ 0.3
TSPAN9-201ENST00000011898 IQGAP2Q13576 1575 aa16.92■□□□□ 0.3
TSPAN9-201ENST00000011898 ANP32CO43423 234 aa16.91■□□□□ 0.3
TSPAN9-201ENST00000011898 EFCAB5A4FU69 1503 aa16.91■□□□□ 0.3
TSPAN9-201ENST00000011898 GLIPR1L2Q4G1C9 344 aa16.9■□□□□ 0.3
TSPAN9-201ENST00000011898 JPH4Q96JJ6 628 aa16.89■□□□□ 0.29
TSPAN9-201ENST00000011898 VPS8Q8N3P4 1428 aa16.88■□□□□ 0.29
TSPAN9-201ENST00000011898 NBR1Q14596 966 aa16.88■□□□□ 0.29
TSPAN9-201ENST00000011898 MIER1Q8N108 512 aa16.88■□□□□ 0.29
TSPAN9-201ENST00000011898 FKBP8Q14318 412 aa16.88■□□□□ 0.29
TSPAN9-201ENST00000011898 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
TSPAN9-201ENST00000011898 NUP160Q12769 1436 aa16.86■□□□□ 0.29
TSPAN9-201ENST00000011898 FMN1Q68DA7 1419 aa16.85■□□□□ 0.29
TSPAN9-201ENST00000011898 ARHGAP35Q9NRY4 1499 aa16.85■□□□□ 0.29
TSPAN9-201ENST00000011898 FHOD3Q2V2M9 1422 aa16.85■□□□□ 0.29
TSPAN9-201ENST00000011898 CHD1O14646 1710 aa16.82■□□□□ 0.28
TSPAN9-201ENST00000011898 CEP170Q5SW79 1584 aa16.81■□□□□ 0.28
TSPAN9-201ENST00000011898 CLSPNQ9HAW4 1339 aa16.8■□□□□ 0.28
TSPAN9-201ENST00000011898 ARAP1Q96P48 1450 aa16.79■□□□□ 0.28
TSPAN9-201ENST00000011898 ARID3CA6NKF2 412 aa16.79■□□□□ 0.28
TSPAN9-201ENST00000011898 UGGT2Q9NYU1 1516 aa16.78■□□□□ 0.28
TSPAN9-201ENST00000011898 DDX10Q13206 875 aaKnown RBP16.77■□□□□ 0.27
TSPAN9-201ENST00000011898 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.27
TSPAN9-201ENST00000011898 ANP32AP39687 249 aaKnown RBP16.74■□□□□ 0.27
TSPAN9-201ENST00000011898 RTN4Q9NQC3 1192 aaKnown RBP16.73■□□□□ 0.27
TSPAN9-201ENST00000011898 ZNF326Q5BKZ1 582 aaKnown RBP16.72■□□□□ 0.27
TSPAN9-201ENST00000011898 PTPRGP23470 1445 aa16.71■□□□□ 0.27
TSPAN9-201ENST00000011898 SAMD9Q5K651 1589 aa16.7■□□□□ 0.26
TSPAN9-201ENST00000011898 KIAA0556O60303 1618 aa16.7■□□□□ 0.26
TSPAN9-201ENST00000011898 CASKIN1Q8WXD9 1431 aa16.69■□□□□ 0.26
TSPAN9-201ENST00000011898 FYCO1Q9BQS8 1478 aa16.68■□□□□ 0.26
TSPAN9-201ENST00000011898 NPM2Q86SE8 214 aaKnown RBP16.66■□□□□ 0.26
TSPAN9-201ENST00000011898 MTUS2Q5JR59 1369 aa16.66■□□□□ 0.26
TSPAN9-201ENST00000011898 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
TSPAN9-201ENST00000011898 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
TSPAN9-201ENST00000011898 PLPPR3Q6T4P5 718 aa16.64■□□□□ 0.26
TSPAN9-201ENST00000011898 HECW1Q76N89 1606 aa16.62■□□□□ 0.25
TSPAN9-201ENST00000011898 NPM1P06748 294 aaKnown RBP eCLIP16.62■□□□□ 0.25
TSPAN9-201ENST00000011898 CCDC18Q5T9S5 1454 aa16.62■□□□□ 0.25
TSPAN9-201ENST00000011898 PCF11O94913 1555 aaKnown RBP16.62■□□□□ 0.25
TSPAN9-201ENST00000011898 CLASP1Q7Z460 1538 aa16.61■□□□□ 0.25
TSPAN9-201ENST00000011898 HIRIP3Q9BW71 556 aaPredicted RBP16.61■□□□□ 0.25
TSPAN9-201ENST00000011898 PRKCSHP14314 528 aaPredicted RBP16.6■□□□□ 0.25
TSPAN9-201ENST00000011898 PLEKHD1A6NEE1 506 aa16.58■□□□□ 0.24
TSPAN9-201ENST00000011898 HNRNPUQ00839 825 aaKnown RBP eCLIP16.56■□□□□ 0.24
TSPAN9-201ENST00000011898 CHIC2Q9UKJ5 165 aa16.55■□□□□ 0.24
TSPAN9-201ENST00000011898 UACAQ9BZF9 1416 aa16.54■□□□□ 0.24
TSPAN9-201ENST00000011898 MAP3K1Q13233 1512 aa16.54■□□□□ 0.24
TSPAN9-201ENST00000011898 RAPGEF6Q8TEU7 1601 aa16.54■□□□□ 0.24
TSPAN9-201ENST00000011898 TIAM1Q13009 1591 aa16.54■□□□□ 0.24
TSPAN9-201ENST00000011898 SHROOM2Q13796 1616 aa16.54■□□□□ 0.24
TSPAN9-201ENST00000011898 KANK4Q5T7N3 995 aaPredicted RBP16.53■□□□□ 0.24
TSPAN9-201ENST00000011898 ZBTB47Q9UFB7 747 aaPredicted RBP16.53■□□□□ 0.24
TSPAN9-201ENST00000011898 PLB1Q6P1J6 1458 aa16.53■□□□□ 0.24
TSPAN9-201ENST00000011898 ZNF777Q9ULD5 760 aaPredicted RBP16.52■□□□□ 0.24
TSPAN9-201ENST00000011898 EPRSP07814 1512 aaKnown RBP16.51■□□□□ 0.23
TSPAN9-201ENST00000011898 DEKP35659 375 aaKnown RBP16.51■□□□□ 0.23
TSPAN9-201ENST00000011898 LRRC9Q6ZRR7 1453 aa16.5■□□□□ 0.23
TSPAN9-201ENST00000011898 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.49■□□□□ 0.23
TSPAN9-201ENST00000011898 SUPT16HQ9Y5B9 1047 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms