RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 P3H3Q8IVL6 736 aa14.98□□□□□ -0.01
CX3CL1-201ENST00000006053 HIRIP3Q9BW71 556 aaPredicted RBP14.98□□□□□ -0.01
CX3CL1-201ENST00000006053 SETD5Q9C0A6 1442 aa14.97□□□□□ -0.01
CX3CL1-201ENST00000006053 MAPKBP1O60336 1514 aa14.97□□□□□ -0.01
CX3CL1-201ENST00000006053 FKBP8Q14318 412 aa14.96□□□□□ -0.01
CX3CL1-201ENST00000006053 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
CX3CL1-201ENST00000006053 IGF1RP08069 1367 aa14.94□□□□□ -0.02
CX3CL1-201ENST00000006053 SLC24A1O60721 1099 aa14.94□□□□□ -0.02
CX3CL1-201ENST00000006053 PHLDB1Q86UU1 1377 aa14.93□□□□□ -0.02
CX3CL1-201ENST00000006053 CFTRP13569 1480 aa14.92□□□□□ -0.02
CX3CL1-201ENST00000006053 CARMIL1Q5VZK9 1371 aa14.91□□□□□ -0.02
CX3CL1-201ENST00000006053 TIAM1Q13009 1591 aa14.91□□□□□ -0.02
CX3CL1-201ENST00000006053 WDR97A6NE52 1622 aa14.91□□□□□ -0.02
CX3CL1-201ENST00000006053 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
CX3CL1-201ENST00000006053 LRRC9Q6ZRR7 1453 aa14.89□□□□□ -0.03
CX3CL1-201ENST00000006053 TRIM52Q96A61 297 aa14.89□□□□□ -0.03
CX3CL1-201ENST00000006053 NEFLP07196 543 aa14.88□□□□□ -0.03
CX3CL1-201ENST00000006053 PPP1R15AO75807 674 aaPredicted RBP14.86□□□□□ -0.03
CX3CL1-201ENST00000006053 ANP32CO43423 234 aa14.86□□□□□ -0.03
CX3CL1-201ENST00000006053 MAP3K1Q13233 1512 aa14.83□□□□□ -0.04
CX3CL1-201ENST00000006053 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.04
CX3CL1-201ENST00000006053 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
CX3CL1-201ENST00000006053 TIMELESSQ9UNS1 1208 aa14.8□□□□□ -0.04
CX3CL1-201ENST00000006053 FHOD3Q2V2M9 1422 aa14.79□□□□□ -0.04
CX3CL1-201ENST00000006053 CCER2I3L3R5 266 aa14.78□□□□□ -0.04
CX3CL1-201ENST00000006053 TONSLQ96HA7 1378 aa14.77□□□□□ -0.04
CX3CL1-201ENST00000006053 PCF11O94913 1555 aaKnown RBP14.77□□□□□ -0.05
CX3CL1-201ENST00000006053 CADPSQ9ULU8 1353 aa14.76□□□□□ -0.05
CX3CL1-201ENST00000006053 RBM19Q9Y4C8 960 aaKnown RBP14.74□□□□□ -0.05
CX3CL1-201ENST00000006053 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
CX3CL1-201ENST00000006053 CFAP43Q8NDM7 1665 aa14.71□□□□□ -0.05
CX3CL1-201ENST00000006053 NESP48681 1621 aa14.69□□□□□ -0.06
CX3CL1-201ENST00000006053 HNRNPUQ00839 825 aaKnown RBP eCLIP14.68□□□□□ -0.06
CX3CL1-201ENST00000006053 MTUS2Q5JR59 1369 aa14.68□□□□□ -0.06
CX3CL1-201ENST00000006053 RAD54L2Q9Y4B4 1467 aa14.68□□□□□ -0.06
CX3CL1-201ENST00000006053 IRX6P78412 446 aaPredicted RBP14.68□□□□□ -0.06
CX3CL1-201ENST00000006053 CCDC18Q5T9S5 1454 aa14.67□□□□□ -0.06
CX3CL1-201ENST00000006053 FYCO1Q9BQS8 1478 aa14.67□□□□□ -0.06
CX3CL1-201ENST00000006053 FGD6Q6ZV73 1430 aa14.67□□□□□ -0.06
CX3CL1-201ENST00000006053 CASKIN1Q8WXD9 1431 aa14.67□□□□□ -0.06
CX3CL1-201ENST00000006053 PRDM2Q13029 1718 aa14.66□□□□□ -0.06
CX3CL1-201ENST00000006053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.65□□□□□ -0.06
CX3CL1-201ENST00000006053 PTPRKQ15262 1439 aa14.63□□□□□ -0.07
CX3CL1-201ENST00000006053 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
CX3CL1-201ENST00000006053 UACAQ9BZF9 1416 aa14.62□□□□□ -0.07
CX3CL1-201ENST00000006053 RRP7BPQ9NSQ0 103 aa14.61□□□□□ -0.07
CX3CL1-201ENST00000006053 CHIC2Q9UKJ5 165 aa14.61□□□□□ -0.07
CX3CL1-201ENST00000006053 FMN1Q68DA7 1419 aa14.61□□□□□ -0.07
CX3CL1-201ENST00000006053 EFCAB5A4FU69 1503 aa14.6□□□□□ -0.07
CX3CL1-201ENST00000006053 HFM1A2PYH4 1435 aa14.6□□□□□ -0.07
CX3CL1-201ENST00000006053 ANO8Q9HCE9 1232 aaPredicted RBP14.6□□□□□ -0.07
CX3CL1-201ENST00000006053 AQRO60306 1485 aaKnown RBP eCLIP14.59□□□□□ -0.072e-7■■■■■ 27.7
CX3CL1-201ENST00000006053 HSPA5P11021 654 aaKnown RBP14.58□□□□□ -0.08
CX3CL1-201ENST00000006053 NAIPQ13075 1403 aa14.57□□□□□ -0.08
CX3CL1-201ENST00000006053 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
CX3CL1-201ENST00000006053 CDK11AQ9UQ88 783 aaPredicted RBP14.57□□□□□ -0.08
CX3CL1-201ENST00000006053 PTPN23Q9H3S7 1636 aa14.56□□□□□ -0.08
CX3CL1-201ENST00000006053 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
CX3CL1-201ENST00000006053 WASHC2AQ641Q2 1341 aa14.55□□□□□ -0.08
CX3CL1-201ENST00000006053 FBLN2P98095 1184 aa14.55□□□□□ -0.08
CX3CL1-201ENST00000006053 MSH5O43196 834 aa14.55□□□□□ -0.08
CX3CL1-201ENST00000006053 NCOA2Q15596 1464 aa14.55□□□□□ -0.08
CX3CL1-201ENST00000006053 ARID3CA6NKF2 412 aa14.54□□□□□ -0.08
CX3CL1-201ENST00000006053 SNAPC4Q5SXM2 1469 aa14.54□□□□□ -0.08
CX3CL1-201ENST00000006053 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
CX3CL1-201ENST00000006053 TOPBP1Q92547 1522 aa14.54□□□□□ -0.08
CX3CL1-201ENST00000006053 EIF4G2P78344 907 aaKnown RBP eCLIP14.53□□□□□ -0.08
CX3CL1-201ENST00000006053 DNMBPQ6XZF7 1577 aa14.52□□□□□ -0.08
CX3CL1-201ENST00000006053 TDRD9Q8NDG6 1382 aaKnown RBP14.52□□□□□ -0.09
CX3CL1-201ENST00000006053 CCDC184Q52MB2 194 aa14.52□□□□□ -0.09
CX3CL1-201ENST00000006053 FAM9BQ8IZU0 186 aa14.52□□□□□ -0.09
CX3CL1-201ENST00000006053 FOXD1Q16676 465 aa14.5□□□□□ -0.09
CX3CL1-201ENST00000006053 CTTNBP2Q8WZ74 1663 aa14.5□□□□□ -0.09
CX3CL1-201ENST00000006053 CUL7Q14999 1698 aa14.49□□□□□ -0.09
CX3CL1-201ENST00000006053 KDM5BQ9UGL1 1544 aa14.47□□□□□ -0.09
CX3CL1-201ENST00000006053 L3MBTL2Q969R5 705 aa14.47□□□□□ -0.09
CX3CL1-201ENST00000006053 MRS2Q9HD23 443 aa14.46□□□□□ -0.09
CX3CL1-201ENST00000006053 CNGB1Q14028 1251 aaPredicted RBP14.46□□□□□ -0.1
CX3CL1-201ENST00000006053 MPHOSPH9Q99550 1183 aa14.46□□□□□ -0.1
CX3CL1-201ENST00000006053 C11orf95C9JLR9 678 aaPredicted RBP14.45□□□□□ -0.1
CX3CL1-201ENST00000006053 PPP4R2Q9NY27 417 aa14.45□□□□□ -0.1
CX3CL1-201ENST00000006053 GRIN2BQ13224 1484 aa14.45□□□□□ -0.1
CX3CL1-201ENST00000006053 SUPT6HQ7KZ85 1726 aaKnown RBP14.44□□□□□ -0.1
CX3CL1-201ENST00000006053 FANCIQ9NVI1 1328 aa14.44□□□□□ -0.1
CX3CL1-201ENST00000006053 B4GALNT3Q6L9W6 998 aa14.44□□□□□ -0.1
CX3CL1-201ENST00000006053 PRKRIP1Q9H875 184 aaPredicted RBP14.43□□□□□ -0.1
CX3CL1-201ENST00000006053 CNTLNQ9NXG0 1405 aa14.43□□□□□ -0.1
CX3CL1-201ENST00000006053 EHBP1L1Q8N3D4 1523 aa14.43□□□□□ -0.1
CX3CL1-201ENST00000006053 LRRIQ1Q96JM4 1722 aa14.43□□□□□ -0.1
CX3CL1-201ENST00000006053 UGGT2Q9NYU1 1516 aa14.4□□□□□ -0.1
CX3CL1-201ENST00000006053 SAMD9Q5K651 1589 aa14.4□□□□□ -0.1
CX3CL1-201ENST00000006053 DENND4BO75064 1496 aaPredicted RBP14.4□□□□□ -0.1
CX3CL1-201ENST00000006053 GAPVD1Q14C86 1478 aa14.4□□□□□ -0.1
CX3CL1-201ENST00000006053 CCDC7Q96M83 1385 aa14.4□□□□□ -0.1
CX3CL1-201ENST00000006053 MAGI3Q5TCQ9 1506 aa14.39□□□□□ -0.11
CX3CL1-201ENST00000006053 ERICH6BQ5W0A0 696 aa14.39□□□□□ -0.11
CX3CL1-201ENST00000006053 POLR3GLQ9BT43 218 aa14.39□□□□□ -0.11
CX3CL1-201ENST00000006053 NBPF8Q3BBV2 869 aa14.38□□□□□ -0.11
CX3CL1-201ENST00000006053 CCDC136Q96JN2 1154 aa14.38□□□□□ -0.11
CX3CL1-201ENST00000006053 URB2Q14146 1524 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms