RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Rrp12Q6P5B0 1295 aaKnown RBP11.86□□□□□ -0.51
Ptpre-204ENSMUST00000209979 Map7d2A2AG50 781 aa11.85□□□□□ -0.51
Ptpre-204ENSMUST00000209979 Lmod2Q3UHZ5 550 aa11.84□□□□□ -0.51
Ptpre-204ENSMUST00000209979 Cep164Q5DU05 1446 aa11.83□□□□□ -0.52
Ptpre-204ENSMUST00000209979 4933402E13RikQ9D4D2 429 aa11.83□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Gm35339A0A140LHH9 1649 aa11.83□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Rad21Q61550 635 aaKnown RBP11.83□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Pknox2Q8BG99 474 aa11.82□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Hnrnpul2Q00PI9 745 aaKnown RBP11.82□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Casc1Q6TDU8 730 aa11.82□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Dnttip2Q8R2M2 758 aaKnown RBP11.82□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Znf316Q6PGE4 1016 aa11.81□□□□□ -0.52
Ptpre-204ENSMUST00000209979 PtmsQ9D0J8 101 aaKnown RBP11.81□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Clip1Q922J3 1391 aa11.8□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Mbd3Q9Z2D8 285 aaKnown RBP11.79□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Ofd1Q80Z25 1017 aa11.79□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Fgd1P52734 960 aa11.78□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Ddrgk1Q80WW9 315 aa11.78□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Gtf3c3Q3TMP1 882 aa11.78□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Map7O88735 730 aa11.77□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Brd4Q9ESU6 1400 aaKnown RBP11.77□□□□□ -0.52
Ptpre-204ENSMUST00000209979 Gm13697A2AK42 830 aa11.77□□□□□ -0.53
Ptpre-204ENSMUST00000209979 Gm973E9Q295 1059 aa11.76□□□□□ -0.53
Ptpre-204ENSMUST00000209979 Zbtb4Q5F293 982 aa11.76□□□□□ -0.53
Ptpre-204ENSMUST00000209979 Chmp4bQ9D8B3 224 aaKnown RBP11.76□□□□□ -0.53
Ptpre-204ENSMUST00000209979 Tcerg1Q8CGF7 1100 aaKnown RBP11.76□□□□□ -0.53
Ptpre-204ENSMUST00000209979 Znf326O88291 580 aa11.75□□□□□ -0.53
Ptpre-204ENSMUST00000209979 SetQ9EQU5 289 aaKnown RBP11.75□□□□□ -0.53
Ptpre-204ENSMUST00000209979 Mak16Q8BGS0 296 aaKnown RBP11.74□□□□□ -0.53
Ptpre-204ENSMUST00000209979 Zbtb7cQ8VCZ7 619 aa11.73□□□□□ -0.53
Ptpre-204ENSMUST00000209979 Ipo9Q91YE6 1041 aa11.73□□□□□ -0.53
Ptpre-204ENSMUST00000209979 Erich6bQ9D4S6 220 aa11.72□□□□□ -0.53
Ptpre-204ENSMUST00000209979 Chic1Q8CBW7 227 aa11.71□□□□□ -0.53
Ptpre-204ENSMUST00000209979 Erich6D3Z6S9 713 aa11.7□□□□□ -0.54
Ptpre-204ENSMUST00000209979 Abcc8B2RUS7 1588 aa11.7□□□□□ -0.54
Ptpre-204ENSMUST00000209979 PnnO35691 725 aaKnown RBP11.69□□□□□ -0.54
Ptpre-204ENSMUST00000209979 Dnai1Q8C0M8 701 aa11.69□□□□□ -0.54
Ptpre-204ENSMUST00000209979 Prdm10Q3UTQ7 1184 aa11.68□□□□□ -0.54
Ptpre-204ENSMUST00000209979 VgfQ0VGU4 617 aa11.67□□□□□ -0.54
Ptpre-204ENSMUST00000209979 Atp1b4Q99ME6 356 aa11.67□□□□□ -0.54
Ptpre-204ENSMUST00000209979 Clstn2Q9ER65 966 aa11.66□□□□□ -0.54
Ptpre-204ENSMUST00000209979 RdxP26043 583 aaKnown RBP11.66□□□□□ -0.54
Ptpre-204ENSMUST00000209979 Taok2Q6ZQ29 1240 aa11.65□□□□□ -0.54
Ptpre-204ENSMUST00000209979 KnstrnQ9D9Z1 312 aaKnown RBP11.65□□□□□ -0.55
Ptpre-204ENSMUST00000209979 Arid4bA2CG63 1314 aaKnown RBP11.64□□□□□ -0.55
Ptpre-204ENSMUST00000209979 Becn1O88597 448 aa11.64□□□□□ -0.55
Ptpre-204ENSMUST00000209979 Spryd3E9Q9B3 442 aa11.63□□□□□ -0.55
Ptpre-204ENSMUST00000209979 Aebp2Q9Z248 504 aaKnown RBP11.63□□□□□ -0.55
Ptpre-204ENSMUST00000209979 Supt16hQ920B9 1047 aa11.63□□□□□ -0.55
Ptpre-204ENSMUST00000209979 Wwc2Q6NXJ0 1187 aa11.62□□□□□ -0.55
Ptpre-204ENSMUST00000209979 Cwc22Q8C5N3 908 aaKnown RBP11.61□□□□□ -0.55
Ptpre-204ENSMUST00000209979 Rangap1P46061 589 aaKnown RBP11.61□□□□□ -0.55
Ptpre-204ENSMUST00000209979 Kiaa0754Q69ZZ9 979 aa11.61□□□□□ -0.55
Ptpre-204ENSMUST00000209979 MccE9PWI3 1003 aa11.6□□□□□ -0.55
Ptpre-204ENSMUST00000209979 SafbD3YXK2 937 aaKnown RBP11.59□□□□□ -0.55
Ptpre-204ENSMUST00000209979 P3h3Q8CG70 732 aa11.59□□□□□ -0.55
Ptpre-204ENSMUST00000209979 Fbxo2Q80UW2 297 aa11.59□□□□□ -0.55
Ptpre-204ENSMUST00000209979 Ush1cQ9ES64 910 aa11.59□□□□□ -0.55
Ptpre-204ENSMUST00000209979 Gm13695A2AK44 830 aa11.58□□□□□ -0.56
Ptpre-204ENSMUST00000209979 Cald1E9QA15 768 aaKnown RBP11.57□□□□□ -0.56
Ptpre-204ENSMUST00000209979 EspnQ9ET47 871 aa11.57□□□□□ -0.56
Ptpre-204ENSMUST00000209979 Trim30aP15533 496 aa11.56□□□□□ -0.56
Ptpre-204ENSMUST00000209979 Cspp1B2RX88 1205 aa11.56□□□□□ -0.56
Ptpre-204ENSMUST00000209979 Pdcl3Q8BVF2 240 aa11.56□□□□□ -0.56
Ptpre-204ENSMUST00000209979 CalrP14211 416 aaKnown RBP11.54□□□□□ -0.56
Ptpre-204ENSMUST00000209979 Ifnlr1Q8CGK5 535 aa11.54□□□□□ -0.56
Ptpre-204ENSMUST00000209979 Chmp5Q9D7S9 219 aa11.54□□□□□ -0.56
Ptpre-204ENSMUST00000209979 NudcO35685 332 aaKnown RBP11.53□□□□□ -0.56
Ptpre-204ENSMUST00000209979 Rwdd1Q9CQK7 243 aa11.53□□□□□ -0.56
Ptpre-204ENSMUST00000209979 Trim26Q99PN3 545 aa11.53□□□□□ -0.56
Ptpre-204ENSMUST00000209979 BccipQ9CWI3 316 aa11.53□□□□□ -0.56
Ptpre-204ENSMUST00000209979 Dusp9Q7TNL7 452 aa11.52□□□□□ -0.56
Ptpre-204ENSMUST00000209979 Ipo8Q7TMY7 1010 aa11.52□□□□□ -0.57
Ptpre-204ENSMUST00000209979 Dbr1Q923B1 550 aa11.52□□□□□ -0.57
Ptpre-204ENSMUST00000209979 Mapk8ip3Q9ESN9 1337 aa11.52□□□□□ -0.57
Ptpre-204ENSMUST00000209979 HnrnpuQ8VEK3 800 aaKnown RBP11.51□□□□□ -0.57
Ptpre-204ENSMUST00000209979 B4galnt3Q6L8S8 986 aa11.51□□□□□ -0.57
Ptpre-204ENSMUST00000209979 Pes1Q9EQ61 584 aaKnown RBP11.5□□□□□ -0.57
Ptpre-204ENSMUST00000209979 Zfp777B9EKF4 885 aa11.5□□□□□ -0.57
Ptpre-204ENSMUST00000209979 Pde3bQ61409 1100 aa11.48□□□□□ -0.57
Ptpre-204ENSMUST00000209979 Hsp90b1P08113 802 aaKnown RBP11.47□□□□□ -0.57
Ptpre-204ENSMUST00000209979 BlmO88700 1416 aa11.47□□□□□ -0.57
Ptpre-204ENSMUST00000209979 PrkcshO08795 521 aa11.47□□□□□ -0.57
Ptpre-204ENSMUST00000209979 Fkbp15Q6P9Q6 1216 aaKnown RBP11.47□□□□□ -0.57
Ptpre-204ENSMUST00000209979 Podxl2Q8CAE9 603 aa11.47□□□□□ -0.57
Ptpre-204ENSMUST00000209979 Rrp9Q91WM3 475 aaKnown RBP11.47□□□□□ -0.57
Ptpre-204ENSMUST00000209979 Glipr1l2Q9CQ35 332 aa11.47□□□□□ -0.57
Ptpre-204ENSMUST00000209979 Apbb1Q9QXJ1 710 aa11.46□□□□□ -0.57
Ptpre-204ENSMUST00000209979 Pcmtd1P59913 357 aa11.45□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Mre11Q61216 706 aa11.45□□□□□ -0.58
Ptpre-204ENSMUST00000209979 R3hcc1Q8BSI6 488 aa11.45□□□□□ -0.58
Ptpre-204ENSMUST00000209979 SlkO54988 1233 aa11.44□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Tpm2P58774 284 aa11.44□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Ubl4bQ9CQ84 188 aa11.44□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Ccdc34Q3UI66 367 aa11.43□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Smarce1O54941 411 aaKnown RBP11.43□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Taf3Q5HZG4 932 aa11.43□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Chic2Q9D9G3 165 aa11.43□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Rb1cc1Q9ESK9 1588 aa11.43□□□□□ -0.58
Ptpre-204ENSMUST00000209979 Atp6v1dP57746 247 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms