RNA–Protein interactions for RNA: ENSMUST00000202681.3

Pdgfra-208, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 2,876 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-208ENSMUST00000202681 Ubl4bQ9CQ84 188 aa12.38□□□□□ -0.43
Pdgfra-208ENSMUST00000202681 Pelp1Q9DBD5 1123 aaKnown RBP12.38□□□□□ -0.43
Pdgfra-208ENSMUST00000202681 Pde4cQ3UEI1 686 aa12.38□□□□□ -0.43
Pdgfra-208ENSMUST00000202681 Tshz2Q68FE9 1030 aa12.35□□□□□ -0.43
Pdgfra-208ENSMUST00000202681 Znf710Q3U288 666 aa12.35□□□□□ -0.43
Pdgfra-208ENSMUST00000202681 Nolc1E9Q5C9 702 aaKnown RBP12.33□□□□□ -0.44
Pdgfra-208ENSMUST00000202681 Ecm2Q5FW85 670 aa12.32□□□□□ -0.44
Pdgfra-208ENSMUST00000202681 Hdac5Q9Z2V6 1113 aa12.3□□□□□ -0.44
Pdgfra-208ENSMUST00000202681 Npm2Q80W85 207 aa12.29□□□□□ -0.44
Pdgfra-208ENSMUST00000202681 Phldb1Q6PDH0 1371 aaKnown RBP12.29□□□□□ -0.44
Pdgfra-208ENSMUST00000202681 Stra8P70278 393 aa12.28□□□□□ -0.44
Pdgfra-208ENSMUST00000202681 AcrbpQ3V140 540 aa12.28□□□□□ -0.44
Pdgfra-208ENSMUST00000202681 Fmn1Q05860 1466 aa12.28□□□□□ -0.44
Pdgfra-208ENSMUST00000202681 Ncapd3Q6ZQK0 1506 aa12.28□□□□□ -0.44
Pdgfra-208ENSMUST00000202681 Rapgef2Q8CHG7 1496 aa12.27□□□□□ -0.44
Pdgfra-208ENSMUST00000202681 Myt1lP97500 1187 aa12.27□□□□□ -0.45
Pdgfra-208ENSMUST00000202681 Supt16hQ920B9 1047 aa12.27□□□□□ -0.45
Pdgfra-208ENSMUST00000202681 Calr4Q3TQS0 420 aa12.26□□□□□ -0.45
Pdgfra-208ENSMUST00000202681 Cux2P70298 1426 aa12.24□□□□□ -0.45
Pdgfra-208ENSMUST00000202681 Rpap1Q80TE0 1409 aa12.23□□□□□ -0.45
Pdgfra-208ENSMUST00000202681 Fam135aQ6NS59 1506 aa12.22□□□□□ -0.45
Pdgfra-208ENSMUST00000202681 Lamc3Q9R0B6 1581 aa12.2□□□□□ -0.46
Pdgfra-208ENSMUST00000202681 Top2aQ01320 1528 aaKnown RBP12.19□□□□□ -0.46
Pdgfra-208ENSMUST00000202681 TnnQ80Z71 1560 aa12.18□□□□□ -0.46
Pdgfra-208ENSMUST00000202681 PtprkP35822 1457 aa12.18□□□□□ -0.46
Pdgfra-208ENSMUST00000202681 Cep162Q6ZQ06 1403 aa12.15□□□□□ -0.46
Pdgfra-208ENSMUST00000202681 Upf2A2AT37 1269 aaKnown RBP12.15□□□□□ -0.46
Pdgfra-208ENSMUST00000202681 Npm1Q61937 292 aaKnown RBP12.15□□□□□ -0.46
Pdgfra-208ENSMUST00000202681 Camsap1A2AHC3 1581 aa12.14□□□□□ -0.47
Pdgfra-208ENSMUST00000202681 Kdm5bQ80Y84 1544 aa12.14□□□□□ -0.47
Pdgfra-208ENSMUST00000202681 Eid3Q3V124 375 aa12.12□□□□□ -0.47
Pdgfra-208ENSMUST00000202681 Plekhg3Q4VAC9 1341 aa12.12□□□□□ -0.47
Pdgfra-208ENSMUST00000202681 Fgd1P52734 960 aa12.12□□□□□ -0.47
Pdgfra-208ENSMUST00000202681 Gtf3c3Q3TMP1 882 aa12.1□□□□□ -0.47
Pdgfra-208ENSMUST00000202681 Washc2Q6PGL7 1334 aa12.09□□□□□ -0.47
Pdgfra-208ENSMUST00000202681 Ccdc27Q3V036 639 aa12.09□□□□□ -0.47
Pdgfra-208ENSMUST00000202681 Wdr43Q6ZQL4 677 aaKnown RBP12.09□□□□□ -0.47
Pdgfra-208ENSMUST00000202681 Ppp4r2Q0VGB7 417 aa12.09□□□□□ -0.47
Pdgfra-208ENSMUST00000202681 Clip1Q922J3 1391 aa12.09□□□□□ -0.47
Pdgfra-208ENSMUST00000202681 Nlrp6Q91WS2 869 aa12.07□□□□□ -0.48
Pdgfra-208ENSMUST00000202681 Ccdc18Q640L5 1455 aa12.06□□□□□ -0.48
Pdgfra-208ENSMUST00000202681 Ccdc9Q8VC31 543 aaKnown RBP12.06□□□□□ -0.48
Pdgfra-208ENSMUST00000202681 NrdcQ8BHG1 1161 aa12.05□□□□□ -0.48
Pdgfra-208ENSMUST00000202681 Mrc2Q64449 1479 aa12.04□□□□□ -0.48
Pdgfra-208ENSMUST00000202681 Kif21aQ9QXL2 1672 aa12.04□□□□□ -0.48
Pdgfra-208ENSMUST00000202681 Pak3Q61036 559 aa12.03□□□□□ -0.48
Pdgfra-208ENSMUST00000202681 Irx3P81067 507 aa12.02□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 Grin2bQ01097 1482 aa12.01□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 Atf5O70191 283 aa12.01□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 Pknox2Q8BG99 474 aa12.01□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 Plcd4Q8K3R3 807 aa12.01□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 Dhx29Q6PGC1 1365 aaKnown RBP12.01□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 Liat1Q810M6 228 aa12□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 LrpprcQ6PB66 1392 aaKnown RBP12□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 Eif4g1Q6NZJ6 1600 aaKnown RBP11.99□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 NclP09405 707 aaKnown RBP11.98□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 Rtn4Q99P72 1162 aaKnown RBP11.98□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 Egfem1Q8C088 590 aa11.98□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 TchhA0A0B4J1F9 1599 aa11.96□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 Rad54l2Q99NG0 1466 aa11.96□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 Baz1bQ9Z277 1479 aa11.96□□□□□ -0.49
Pdgfra-208ENSMUST00000202681 UacaQ8CGB3 1411 aa11.96□□□□□ -0.5
Pdgfra-208ENSMUST00000202681 Duox2A2AQ99 1517 aa11.95□□□□□ -0.5
Pdgfra-208ENSMUST00000202681 Shroom4Q1W617 1475 aa11.95□□□□□ -0.5
Pdgfra-208ENSMUST00000202681 Arhgap35Q91YM2 1499 aa11.95□□□□□ -0.5
Pdgfra-208ENSMUST00000202681 Gm13697A2AK42 830 aa11.94□□□□□ -0.5
Pdgfra-208ENSMUST00000202681 Smg6P61406 1418 aaKnown RBP11.94□□□□□ -0.5
Pdgfra-208ENSMUST00000202681 Hsp90aa1P07901 733 aaKnown RBP11.93□□□□□ -0.5
Pdgfra-208ENSMUST00000202681 Samd9lQ69Z37 1561 aa11.93□□□□□ -0.5
Pdgfra-208ENSMUST00000202681 PogzQ8BZH4 1409 aaKnown RBP11.93□□□□□ -0.5
Pdgfra-208ENSMUST00000202681 Slc24a1Q91WD8 1130 aa11.92□□□□□ -0.5
Pdgfra-208ENSMUST00000202681 Ipo9Q91YE6 1041 aa11.91□□□□□ -0.5
Pdgfra-208ENSMUST00000202681 Plb1Q3TTY0 1478 aa11.91□□□□□ -0.5
Pdgfra-208ENSMUST00000202681 Eif5bQ05D44 1216 aaKnown RBP11.89□□□□□ -0.51
Pdgfra-208ENSMUST00000202681 Arap1Q4LDD4 1452 aa11.88□□□□□ -0.51
Pdgfra-208ENSMUST00000202681 Vsig10D3YX43 558 aa11.88□□□□□ -0.51
Pdgfra-208ENSMUST00000202681 Ipo4Q8VI75 1082 aa11.88□□□□□ -0.51
Pdgfra-208ENSMUST00000202681 NrkQ9R0G8 1455 aa11.87□□□□□ -0.51
Pdgfra-208ENSMUST00000202681 Crocc2F6XLV1 1638 aa11.87□□□□□ -0.51
Pdgfra-208ENSMUST00000202681 Urb2E9Q7L1 1524 aaKnown RBP11.86□□□□□ -0.51
Pdgfra-208ENSMUST00000202681 Arhgef5E9Q7D5 1581 aa11.84□□□□□ -0.51
Pdgfra-208ENSMUST00000202681 Ccer2J3QPU5 274 aa11.84□□□□□ -0.51
Pdgfra-208ENSMUST00000202681 Ncoa2Q61026 1462 aa11.83□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Eea1Q8BL66 1411 aa11.83□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Cdca7Q9D0M2 382 aa11.82□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Lrriq1Q0P5X1 1673 aa11.82□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Lmod2Q3UHZ5 550 aa11.81□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Mroh2bQ7M6Y6 1581 aa11.81□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Camsap2Q8C1B1 1461 aa11.81□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Sin3aQ60520 1274 aaKnown RBP11.8□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Ankrd36D3Z4K0 1415 aa11.79□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Iqcf3Q9D498 203 aa11.79□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Efcab5A0JP43 1406 aa11.79□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Slc4a3P16283 1227 aa11.78□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Cux1P53564 1515 aa11.78□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Hspa5P20029 655 aaKnown RBP11.77□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 4933416C03RikQ3V063 378 aa11.77□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 P3h3Q8CG70 732 aa11.77□□□□□ -0.52
Pdgfra-208ENSMUST00000202681 Tiam1Q60610 1591 aa11.77□□□□□ -0.53
Pdgfra-208ENSMUST00000202681 Setd5Q5XJV7 1441 aa11.77□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms