RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 BccipQ9CWI3 316 aa9.98□□□□□ -0.81
Pcdh9-204ENSMUST00000193901 Chmp4bQ9D8B3 224 aaKnown RBP9.97□□□□□ -0.81
Pcdh9-204ENSMUST00000193901 Slc4a1apE9PX68 744 aa9.97□□□□□ -0.81
Pcdh9-204ENSMUST00000193901 MsnP26041 577 aaKnown RBP9.96□□□□□ -0.81
Pcdh9-204ENSMUST00000193901 Mier1Q5UAK0 511 aa9.96□□□□□ -0.82
Pcdh9-204ENSMUST00000193901 Ccdc27Q3V036 639 aa9.95□□□□□ -0.82
Pcdh9-204ENSMUST00000193901 Trim30dE9PWL0 497 aa9.94□□□□□ -0.82
Pcdh9-204ENSMUST00000193901 Ppm1gQ61074 542 aa9.94□□□□□ -0.82
Pcdh9-204ENSMUST00000193901 Pes1Q9EQ61 584 aaKnown RBP9.94□□□□□ -0.82
Pcdh9-204ENSMUST00000193901 Noc3lQ8VI84 807 aaKnown RBP9.94□□□□□ -0.82
Pcdh9-204ENSMUST00000193901 AU015836B2RUM3 263 aa9.94□□□□□ -0.82
Pcdh9-204ENSMUST00000193901 PtmsQ9D0J8 101 aaKnown RBP9.93□□□□□ -0.82
Pcdh9-204ENSMUST00000193901 Rangap1P46061 589 aaKnown RBP9.92□□□□□ -0.82
Pcdh9-204ENSMUST00000193901 Wwc2Q6NXJ0 1187 aa9.91□□□□□ -0.82
Pcdh9-204ENSMUST00000193901 Ftsj3Q9DBE9 838 aaKnown RBP9.9□□□□□ -0.82
Pcdh9-204ENSMUST00000193901 Zfp777B9EKF4 885 aa9.89□□□□□ -0.83
Pcdh9-204ENSMUST00000193901 Dnai2A2AC93 623 aa9.89□□□□□ -0.83
Pcdh9-204ENSMUST00000193901 Irx3P81067 507 aa9.89□□□□□ -0.83
Pcdh9-204ENSMUST00000193901 Map7O88735 730 aa9.89□□□□□ -0.83
Pcdh9-204ENSMUST00000193901 Rad21Q61550 635 aaKnown RBP9.89□□□□□ -0.83
Pcdh9-204ENSMUST00000193901 Lmod2Q3UHZ5 550 aa9.87□□□□□ -0.83
Pcdh9-204ENSMUST00000193901 Prm3Q62100 101 aa9.86□□□□□ -0.83
Pcdh9-204ENSMUST00000193901 MccE9PWI3 1003 aa9.85□□□□□ -0.83
Pcdh9-204ENSMUST00000193901 Clstn2Q9ER65 966 aa9.85□□□□□ -0.83
Pcdh9-204ENSMUST00000193901 Hsp90b1P08113 802 aaKnown RBP9.84□□□□□ -0.83
Pcdh9-204ENSMUST00000193901 Eif4g2Q62448 906 aaKnown RBP9.84□□□□□ -0.83
Pcdh9-204ENSMUST00000193901 Dusp9Q7TNL7 452 aa9.84□□□□□ -0.83
Pcdh9-204ENSMUST00000193901 RdxP26043 583 aaKnown RBP9.83□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Tpm3-rs7D3Z2H9 248 aa9.83□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Anapc15P60007 132 aa9.82□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Gm38655A0A286YDK6 273 aa9.82□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Gm6268A2A3U9 297 aa9.82□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Npm1Q61937 292 aaKnown RBP9.82□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 CalrP14211 416 aaKnown RBP9.82□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Mrs2Q5NCE8 434 aa9.81□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Becn1O88597 448 aa9.81□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Cald1E9QA15 768 aaKnown RBP9.81□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Pde3bQ61409 1100 aa9.81□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Podxl2Q8CAE9 603 aa9.81□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Erich6bQ9D4S6 220 aa9.8□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Tpm3P21107 285 aaKnown RBP9.8□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Arid4bA2CG63 1314 aaKnown RBP9.8□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Ifnlr1Q8CGK5 535 aa9.79□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Rrp12Q6P5B0 1295 aaKnown RBP9.78□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 Zcchc6Q5BLK4 1491 aaKnown RBP9.78□□□□□ -0.84
Pcdh9-204ENSMUST00000193901 KnstrnQ9D9Z1 312 aaKnown RBP9.77□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Kiaa0754Q69ZZ9 979 aa9.76□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Clstn1Q9EPL2 979 aa9.75□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Mapk8ip2Q9ERE9 830 aa9.75□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 NudcO35685 332 aaKnown RBP9.75□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Sh3bp5Q9Z131 463 aa9.75□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 R3hcc1Q8BSI6 488 aa9.75□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Trim26Q99PN3 545 aa9.75□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Iqcf3Q9D498 203 aa9.75□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Dnttip2Q8R2M2 758 aaKnown RBP9.74□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Safb2Q80YR5 991 aaKnown RBP9.74□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Plekhg3Q4VAC9 1341 aa9.73□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Cspp1B2RX88 1205 aa9.72□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 HnrnpuQ8VEK3 800 aaKnown RBP9.72□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Ddrgk1Q80WW9 315 aa9.72□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Mapk8ip3Q9ESN9 1337 aa9.72□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Ccdc34Q3UI66 367 aa9.71□□□□□ -0.85
Pcdh9-204ENSMUST00000193901 Mbd3Q9Z2D8 285 aaKnown RBP9.71□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Zrsr2Q62377 462 aaKnown RBP9.7□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Trim30aP15533 496 aa9.7□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Irx6Q9ER75 438 aa9.68□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 NacadQ5SWP3 1504 aa9.68□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 4933402E13RikQ9D4D2 429 aa9.68□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Pcmtd1P59913 357 aa9.68□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 IqubQ8CDK3 788 aa9.68□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Chaf1aQ9QWF0 911 aa9.67□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Ofd1Q80Z25 1017 aa9.67□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Rassf8Q8CJ96 419 aa9.66□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Isy1Q69ZQ2 285 aaKnown RBP9.66□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Rtn4Q99P72 1162 aaKnown RBP9.66□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Iffo2Q8R2V2 512 aa9.66□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Ipo7Q9EPL8 1038 aaKnown RBP9.66□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Bcl11aQ9QYE3 773 aa9.65□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Tpm1P58771 284 aa9.65□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Rtl1Q7M732 1744 aa9.65□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Hap1O35668 628 aa9.65□□□□□ -0.86
Pcdh9-204ENSMUST00000193901 Tpm2P58774 284 aa9.65□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 Eid3Q3V124 375 aa9.64□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 Sart3Q9JLI8 962 aaKnown RBP9.64□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 Sall2Q9QX96 1004 aa9.64□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 Dctn1O08788 1281 aa9.64□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 VgfQ0VGU4 617 aa9.64□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 Tpm4Q6IRU2 248 aa9.64□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 Smarce1O54941 411 aaKnown RBP9.63□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 Spryd3E9Q9B3 442 aa9.63□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 Odf2A3KGV1 830 aaKnown RBP9.63□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 Plppr3Q7TPB0 716 aa9.61□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 Fam71e1A1L3C1 212 aa9.61□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 Kif3cO35066 796 aa9.6□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 CgnP59242 1191 aa9.6□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 Atp6v1dP57746 247 aa9.59□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 P3h3Q8CG70 732 aa9.59□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 A0A1L1SQF0 893 aa9.59□□□□□ -0.87
Pcdh9-204ENSMUST00000193901 Nol10Q5RJG1 687 aaKnown RBP9.58□□□□□ -0.88
Pcdh9-204ENSMUST00000193901 Fkbp15Q6P9Q6 1216 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms