RNA–Protein interactions for RNA: ENSMUST00000188417.1

Gm28718-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28718, Length 2,168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28718-201ENSMUST00000188417 TonslQ6NZL6 1363 aa11.14□□□□□ -0.63
Gm28718-201ENSMUST00000188417 Gtf3c3Q3TMP1 882 aa11.13□□□□□ -0.63
Gm28718-201ENSMUST00000188417 Kdm5dQ62240 1548 aa11.12□□□□□ -0.63
Gm28718-201ENSMUST00000188417 Upf2A2AT37 1269 aaKnown RBP11.12□□□□□ -0.63
Gm28718-201ENSMUST00000188417 Rb1cc1Q9ESK9 1588 aa11.11□□□□□ -0.63
Gm28718-201ENSMUST00000188417 Tshz2Q68FE9 1030 aa11.11□□□□□ -0.63
Gm28718-201ENSMUST00000188417 NacadQ5SWP3 1504 aa11.11□□□□□ -0.63
Gm28718-201ENSMUST00000188417 Prm3Q62100 101 aa11.1□□□□□ -0.63
Gm28718-201ENSMUST00000188417 Nolc1E9Q5C9 702 aaKnown RBP11.09□□□□□ -0.63
Gm28718-201ENSMUST00000188417 Supt16hQ920B9 1047 aa11.07□□□□□ -0.64
Gm28718-201ENSMUST00000188417 Zbtb12Q9Z150 459 aa11.07□□□□□ -0.64
Gm28718-201ENSMUST00000188417 Stra8P70278 393 aa11.06□□□□□ -0.64
Gm28718-201ENSMUST00000188417 Znf710Q3U288 666 aa11.06□□□□□ -0.64
Gm28718-201ENSMUST00000188417 Gtpbp6Q3U6U5 514 aa11.05□□□□□ -0.64
Gm28718-201ENSMUST00000188417 Ccdc27Q3V036 639 aa11.05□□□□□ -0.64
Gm28718-201ENSMUST00000188417 Baz1aO88379 1555 aa11.05□□□□□ -0.64
Gm28718-201ENSMUST00000188417 Rsf1E9PWW9 1441 aaKnown RBP11.05□□□□□ -0.64
Gm28718-201ENSMUST00000188417 Rtn4Q99P72 1162 aaKnown RBP11.04□□□□□ -0.64
Gm28718-201ENSMUST00000188417 Irx3P81067 507 aa11.04□□□□□ -0.64
Gm28718-201ENSMUST00000188417 Ttbk1Q6PCN3 1308 aa11.03□□□□□ -0.64
Gm28718-201ENSMUST00000188417 Rnf216P58283 853 aa11.03□□□□□ -0.64
Gm28718-201ENSMUST00000188417 Styxl1Q9DAR2 321 aa11.03□□□□□ -0.64
Gm28718-201ENSMUST00000188417 Plcd4Q8K3R3 807 aa11□□□□□ -0.65
Gm28718-201ENSMUST00000188417 Calr4Q3TQS0 420 aa10.99□□□□□ -0.65
Gm28718-201ENSMUST00000188417 Ipo4Q8VI75 1082 aa10.97□□□□□ -0.65
Gm28718-201ENSMUST00000188417 Nkx1-1G3UXB3 402 aa10.96□□□□□ -0.65
Gm28718-201ENSMUST00000188417 UbtfP25976 765 aaKnown RBP10.94□□□□□ -0.66
Gm28718-201ENSMUST00000188417 Ap3b1Q9Z1T1 1105 aa10.94□□□□□ -0.66
Gm28718-201ENSMUST00000188417 Il27Q8K3I6 234 aa10.93□□□□□ -0.66
Gm28718-201ENSMUST00000188417 Washc2Q6PGL7 1334 aa10.92□□□□□ -0.66
Gm28718-201ENSMUST00000188417 Hsp90aa1P07901 733 aaKnown RBP10.89□□□□□ -0.67
Gm28718-201ENSMUST00000188417 GapdhsQ64467 440 aa10.89□□□□□ -0.67
Gm28718-201ENSMUST00000188417 Smarca2Q6DIC0 1577 aa10.87□□□□□ -0.67
Gm28718-201ENSMUST00000188417 Fbln2P37889 1221 aa10.87□□□□□ -0.67
Gm28718-201ENSMUST00000188417 Wdr43Q6ZQL4 677 aaKnown RBP10.87□□□□□ -0.67
Gm28718-201ENSMUST00000188417 Sycp2Q9CUU3 1500 aa10.86□□□□□ -0.67
Gm28718-201ENSMUST00000188417 Gtf3c5Q8R2T8 520 aa10.86□□□□□ -0.67
Gm28718-201ENSMUST00000188417 Rpap1Q80TE0 1409 aa10.85□□□□□ -0.67
Gm28718-201ENSMUST00000188417 Npm3Q9CPP0 175 aaKnown RBP10.85□□□□□ -0.67
Gm28718-201ENSMUST00000188417 Ccdc88bQ4QRL3 1481 aa10.84□□□□□ -0.67
Gm28718-201ENSMUST00000188417 BccipQ9CWI3 316 aa10.83□□□□□ -0.68
Gm28718-201ENSMUST00000188417 Ncapd3Q6ZQK0 1506 aa10.81□□□□□ -0.68
Gm28718-201ENSMUST00000188417 Liat1Q810M6 228 aa10.8□□□□□ -0.68
Gm28718-201ENSMUST00000188417 Ipo9Q91YE6 1041 aa10.8□□□□□ -0.68
Gm28718-201ENSMUST00000188417 MpndQ3TV65 487 aa10.79□□□□□ -0.68
Gm28718-201ENSMUST00000188417 Myt1lP97500 1187 aa10.78□□□□□ -0.68
Gm28718-201ENSMUST00000188417 Pak3Q61036 559 aa10.78□□□□□ -0.68
Gm28718-201ENSMUST00000188417 Crybg2B7ZCC2 1516 aa10.78□□□□□ -0.68
Gm28718-201ENSMUST00000188417 Kcnn1Q9EQR3 537 aa10.77□□□□□ -0.68
Gm28718-201ENSMUST00000188417 Golga3P55937 1487 aa10.75□□□□□ -0.69
Gm28718-201ENSMUST00000188417 Pdcl3Q8BVF2 240 aa10.74□□□□□ -0.69
Gm28718-201ENSMUST00000188417 NeflP08551 543 aa10.72□□□□□ -0.69
Gm28718-201ENSMUST00000188417 Rapgef2Q8CHG7 1496 aa10.71□□□□□ -0.69
Gm28718-201ENSMUST00000188417 Kdm5bQ80Y84 1544 aa10.7□□□□□ -0.7
Gm28718-201ENSMUST00000188417 Gtf2a1Q99PM3 378 aa10.67□□□□□ -0.7
Gm28718-201ENSMUST00000188417 Iqcf3Q9D498 203 aa10.67□□□□□ -0.7
Gm28718-201ENSMUST00000188417 AampJ3QN89 436 aa10.67□□□□□ -0.7
Gm28718-201ENSMUST00000188417 Ccer2J3QPU5 274 aa10.67□□□□□ -0.7
Gm28718-201ENSMUST00000188417 Brd4Q9ESU6 1400 aaKnown RBP10.64□□□□□ -0.71
Gm28718-201ENSMUST00000188417 BicraF8VPZ9 1578 aa10.63□□□□□ -0.71
Gm28718-201ENSMUST00000188417 4933416C03RikQ3V063 378 aa10.63□□□□□ -0.71
Gm28718-201ENSMUST00000188417 TimelessQ9R1X4 1197 aa10.63□□□□□ -0.71
Gm28718-201ENSMUST00000188417 Tcf3P15806 651 aa10.62□□□□□ -0.71
Gm28718-201ENSMUST00000188417 Zfp777B9EKF4 885 aa10.62□□□□□ -0.71
Gm28718-201ENSMUST00000188417 UacaQ8CGB3 1411 aa10.62□□□□□ -0.71
Gm28718-201ENSMUST00000188417 Smg6P61406 1418 aaKnown RBP10.61□□□□□ -0.71
Gm28718-201ENSMUST00000188417 Ppp1r37Q8BKR5 712 aa10.61□□□□□ -0.71
Gm28718-201ENSMUST00000188417 Rrp9Q91WM3 475 aaKnown RBP10.61□□□□□ -0.71
Gm28718-201ENSMUST00000188417 Gm13697A2AK42 830 aa10.6□□□□□ -0.71
Gm28718-201ENSMUST00000188417 Tcerg1Q8CGF7 1100 aaKnown RBP10.59□□□□□ -0.71
Gm28718-201ENSMUST00000188417 DmtnQ9WV69 405 aa10.59□□□□□ -0.71
Gm28718-201ENSMUST00000188417 Scaf1Q5U4C3 1256 aaKnown RBP10.58□□□□□ -0.72
Gm28718-201ENSMUST00000188417 Znf316Q6PGE4 1016 aa10.58□□□□□ -0.72
Gm28718-201ENSMUST00000188417 Dnttip2Q8R2M2 758 aaKnown RBP10.58□□□□□ -0.72
Gm28718-201ENSMUST00000188417 Top2bQ64511 1612 aa10.57□□□□□ -0.72
Gm28718-201ENSMUST00000188417 TchhA0A0B4J1F9 1599 aa10.57□□□□□ -0.72
Gm28718-201ENSMUST00000188417 Cep162Q6ZQ06 1403 aa10.57□□□□□ -0.72
Gm28718-201ENSMUST00000188417 DaxxO35613 739 aa10.56□□□□□ -0.72
Gm28718-201ENSMUST00000188417 ArxO35085 564 aa10.56□□□□□ -0.72
Gm28718-201ENSMUST00000188417 Pitpnm1O35954 1243 aa10.55□□□□□ -0.72
Gm28718-201ENSMUST00000188417 Camsap2Q8C1B1 1461 aa10.54□□□□□ -0.72
Gm28718-201ENSMUST00000188417 Ildr2B5TVM2 661 aa10.54□□□□□ -0.72
Gm28718-201ENSMUST00000188417 AU015836B2RUM3 263 aa10.53□□□□□ -0.72
Gm28718-201ENSMUST00000188417 Znf703P0CL69 594 aa10.53□□□□□ -0.72
Gm28718-201ENSMUST00000188417 Skida1Q80YR3 822 aa10.53□□□□□ -0.72
Gm28718-201ENSMUST00000188417 Eid3Q3V124 375 aa10.52□□□□□ -0.73
Gm28718-201ENSMUST00000188417 Ncoa2Q61026 1462 aa10.51□□□□□ -0.73
Gm28718-201ENSMUST00000188417 NgefQ8CHT1 710 aa10.51□□□□□ -0.73
Gm28718-201ENSMUST00000188417 Baz1bQ9Z277 1479 aa10.51□□□□□ -0.73
Gm28718-201ENSMUST00000188417 Clip1Q922J3 1391 aa10.51□□□□□ -0.73
Gm28718-201ENSMUST00000188417 NclP09405 707 aaKnown RBP10.5□□□□□ -0.73
Gm28718-201ENSMUST00000188417 Trim35Q8C006 501 aa10.5□□□□□ -0.73
Gm28718-201ENSMUST00000188417 Pdlim2Q8R1G6 349 aa10.49□□□□□ -0.73
Gm28718-201ENSMUST00000188417 Eif5bQ05D44 1216 aaKnown RBP10.48□□□□□ -0.73
Gm28718-201ENSMUST00000188417 Mink1Q9JM52 1308 aa10.48□□□□□ -0.73
Gm28718-201ENSMUST00000188417 Eif4g1Q6NZJ6 1600 aaKnown RBP10.47□□□□□ -0.73
Gm28718-201ENSMUST00000188417 Ecm2Q5FW85 670 aa10.46□□□□□ -0.73
Gm28718-201ENSMUST00000188417 Plekhg3Q4VAC9 1341 aa10.46□□□□□ -0.74
Gm28718-201ENSMUST00000188417 Prr29B1ARI9 187 aa10.45□□□□□ -0.74
Gm28718-201ENSMUST00000188417 Top2aQ01320 1528 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms