RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 Clstn2Q9ER65 966 aa22.53■■□□□ 1.2
Shroom3-204ENSMUST00000168878 Setd5Q5XJV7 1441 aa22.52■■□□□ 1.2
Shroom3-204ENSMUST00000168878 Rangap1P46061 589 aaKnown RBP22.51■■□□□ 1.19
Shroom3-204ENSMUST00000168878 Ubl4bQ9CQ84 188 aa22.45■■□□□ 1.18
Shroom3-204ENSMUST00000168878 Fam71e1A1L3C1 212 aa22.44■■□□□ 1.18
Shroom3-204ENSMUST00000168878 CanxP35564 591 aaKnown RBP22.42■■□□□ 1.18
Shroom3-204ENSMUST00000168878 DekQ7TNV0 380 aaKnown RBP22.4■■□□□ 1.18
Shroom3-204ENSMUST00000168878 Ofd1Q80Z25 1017 aa22.37■■□□□ 1.17
Shroom3-204ENSMUST00000168878 Golga3P55937 1487 aa22.36■■□□□ 1.17
Shroom3-204ENSMUST00000168878 Hsp90ab1P11499 724 aaKnown RBP22.35■■□□□ 1.17
Shroom3-204ENSMUST00000168878 Rgl3Q3UYI5 709 aa22.35■■□□□ 1.17
Shroom3-204ENSMUST00000168878 CatipB9EKE5 520 aa22.34■■□□□ 1.17
Shroom3-204ENSMUST00000168878 Trim30dE9PWL0 497 aa22.32■■□□□ 1.16
Shroom3-204ENSMUST00000168878 Trim44Q9QXA7 346 aa22.31■■□□□ 1.16
Shroom3-204ENSMUST00000168878 Fgd1P52734 960 aa22.29■■□□□ 1.16
Shroom3-204ENSMUST00000168878 P3h3Q8CG70 732 aa22.27■■□□□ 1.16
Shroom3-204ENSMUST00000168878 Vsig10D3YX43 558 aa22.26■■□□□ 1.15
Shroom3-204ENSMUST00000168878 Eea1Q8BL66 1411 aa22.25■■□□□ 1.15
Shroom3-204ENSMUST00000168878 Ccdc27Q3V036 639 aa22.24■■□□□ 1.15
Shroom3-204ENSMUST00000168878 Trim26Q99PN3 545 aa22.24■■□□□ 1.15
Shroom3-204ENSMUST00000168878 Baz1aO88379 1555 aa22.22■■□□□ 1.15
Shroom3-204ENSMUST00000168878 NacadQ5SWP3 1504 aa22.19■■□□□ 1.14
Shroom3-204ENSMUST00000168878 Ythdc1E9Q5K9 736 aaKnown RBP22.19■■□□□ 1.14
Shroom3-204ENSMUST00000168878 Lmod3E9QA62 571 aa22.19■■□□□ 1.14
Shroom3-204ENSMUST00000168878 Cwc22Q8C5N3 908 aaKnown RBP22.17■■□□□ 1.14
Shroom3-204ENSMUST00000168878 Htatsf1Q8BGC0 757 aa22.16■■□□□ 1.14
Shroom3-204ENSMUST00000168878 Card11Q8CIS0 1159 aa22.14■■□□□ 1.13
Shroom3-204ENSMUST00000168878 Rsf1E9PWW9 1441 aaKnown RBP22.11■■□□□ 1.13
Shroom3-204ENSMUST00000168878 Grwd1Q810D6 446 aaKnown RBP22.11■■□□□ 1.13
Shroom3-204ENSMUST00000168878 Ppm1gQ61074 542 aa22.1■■□□□ 1.13
Shroom3-204ENSMUST00000168878 Kif15Q6P9L6 1387 aa22.09■■□□□ 1.13
Shroom3-204ENSMUST00000168878 PtmaP26350 111 aa22.07■■□□□ 1.12
Shroom3-204ENSMUST00000168878 Apbb1Q9QXJ1 710 aa22.05■■□□□ 1.12
Shroom3-204ENSMUST00000168878 Plppr3Q7TPB0 716 aa22.05■■□□□ 1.12
Shroom3-204ENSMUST00000168878 Mia2Q91ZV0 1396 aa22.04■■□□□ 1.12
Shroom3-204ENSMUST00000168878 Plcb2A3KGF7 1181 aa22.04■■□□□ 1.12
Shroom3-204ENSMUST00000168878 Arid4bA2CG63 1314 aaKnown RBP22.03■■□□□ 1.12
Shroom3-204ENSMUST00000168878 Kdm2aP59997 1161 aa22.02■■□□□ 1.11
Shroom3-204ENSMUST00000168878 IqubQ8CDK3 788 aa22.01■■□□□ 1.11
Shroom3-204ENSMUST00000168878 SafbD3YXK2 937 aaKnown RBP22■■□□□ 1.11
Shroom3-204ENSMUST00000168878 Mroh3A0A1D5RM54 893 aa21.99■■□□□ 1.11
Shroom3-204ENSMUST00000168878 Ccdc18Q640L5 1455 aa21.99■■□□□ 1.11
Shroom3-204ENSMUST00000168878 Srpk2O54781 681 aaKnown RBP21.98■■□□□ 1.11
Shroom3-204ENSMUST00000168878 Neurod2Q62414 383 aa21.98■■□□□ 1.11
Shroom3-204ENSMUST00000168878 Mtus2Q3UHD3 1353 aa21.94■■□□□ 1.1
Shroom3-204ENSMUST00000168878 Mapk8ip3Q9ESN9 1337 aa21.93■■□□□ 1.1
Shroom3-204ENSMUST00000168878 Gm20521D3Z5F7 333 aa21.92■■□□□ 1.1
Shroom3-204ENSMUST00000168878 Map7O88735 730 aa21.91■■□□□ 1.1
Shroom3-204ENSMUST00000168878 Dbr1Q923B1 550 aa21.91■■□□□ 1.1
Shroom3-204ENSMUST00000168878 Mbd3Q9Z2D8 285 aaKnown RBP21.9■■□□□ 1.1
Shroom3-204ENSMUST00000168878 Chmp4bQ9D8B3 224 aaKnown RBP21.89■■□□□ 1.1
Shroom3-204ENSMUST00000168878 Safb2Q80YR5 991 aaKnown RBP21.89■■□□□ 1.1
Shroom3-204ENSMUST00000168878 Bcl11aQ9QYE3 773 aa21.89■■□□□ 1.09
Shroom3-204ENSMUST00000168878 Exosc9Q9JHI7 438 aaKnown RBP21.89■■□□□ 1.09
Shroom3-204ENSMUST00000168878 Hspa5P20029 655 aaKnown RBP21.88■■□□□ 1.09
Shroom3-204ENSMUST00000168878 Irx3P81067 507 aa21.87■■□□□ 1.09
Shroom3-204ENSMUST00000168878 B4galnt3Q6L8S8 986 aa21.86■■□□□ 1.09
Shroom3-204ENSMUST00000168878 Tcerg1Q8CGF7 1100 aaKnown RBP21.85■■□□□ 1.09
Shroom3-204ENSMUST00000168878 Wwc2Q6NXJ0 1187 aa21.84■■□□□ 1.09
Shroom3-204ENSMUST00000168878 Arhgap27A2AB59 869 aa21.84■■□□□ 1.09
Shroom3-204ENSMUST00000168878 Irx6Q9ER75 438 aa21.82■■□□□ 1.08
Shroom3-204ENSMUST00000168878 Rrp7aQ9D1C9 280 aaKnown RBP21.82■■□□□ 1.08
Shroom3-204ENSMUST00000168878 Rwdd1Q9CQK7 243 aa21.8■■□□□ 1.08
Shroom3-204ENSMUST00000168878 NudcO35685 332 aaKnown RBP21.8■■□□□ 1.08
Shroom3-204ENSMUST00000168878 Slc4a3P16283 1227 aa21.78■■□□□ 1.08
Shroom3-204ENSMUST00000168878 Armcx1Q9CX83 456 aa21.78■■□□□ 1.08
Shroom3-204ENSMUST00000168878 Gm6268A2A3U9 297 aa21.78■■□□□ 1.08
Shroom3-204ENSMUST00000168878 Ercc6F8VPZ5 1481 aa21.78■■□□□ 1.08
Shroom3-204ENSMUST00000168878 Supt16hQ920B9 1047 aa21.76■■□□□ 1.07
Shroom3-204ENSMUST00000168878 Spryd3E9Q9B3 442 aa21.74■■□□□ 1.07
Shroom3-204ENSMUST00000168878 Casc1Q6TDU8 730 aa21.74■■□□□ 1.07
Shroom3-204ENSMUST00000168878 KnstrnQ9D9Z1 312 aaKnown RBP21.73■■□□□ 1.07
Shroom3-204ENSMUST00000168878 Stag3O70576 1240 aa21.72■■□□□ 1.07
Shroom3-204ENSMUST00000168878 Iqcf3Q9D498 203 aa21.71■■□□□ 1.07
Shroom3-204ENSMUST00000168878 Cep162Q6ZQ06 1403 aa21.71■■□□□ 1.07
Shroom3-204ENSMUST00000168878 AU015836B2RUM3 263 aa21.69■■□□□ 1.06
Shroom3-204ENSMUST00000168878 Pkd2O35245 966 aa21.69■■□□□ 1.06
Shroom3-204ENSMUST00000168878 Stk24Q99KH8 431 aa21.69■■□□□ 1.06
Shroom3-204ENSMUST00000168878 Exoc6Q8R313 802 aa21.68■■□□□ 1.06
Shroom3-204ENSMUST00000168878 Chmp5Q9D7S9 219 aa21.68■■□□□ 1.06
Shroom3-204ENSMUST00000168878 Adam1bQ8R534 806 aa21.68■■□□□ 1.06
Shroom3-204ENSMUST00000168878 Ccdc88bQ4QRL3 1481 aa21.67■■□□□ 1.06
Shroom3-204ENSMUST00000168878 Rundc1Q0VDN7 615 aa21.66■■□□□ 1.06
Shroom3-204ENSMUST00000168878 Dnai1Q8C0M8 701 aa21.66■■□□□ 1.06
Shroom3-204ENSMUST00000168878 Zfp777B9EKF4 885 aa21.66■■□□□ 1.06
Shroom3-204ENSMUST00000168878 Fhad1A6PWD2 1420 aa21.65■■□□□ 1.06
Shroom3-204ENSMUST00000168878 Hsp90b1P08113 802 aaKnown RBP21.63■■□□□ 1.05
Shroom3-204ENSMUST00000168878 Ipo9Q91YE6 1041 aa21.63■■□□□ 1.05
Shroom3-204ENSMUST00000168878 EspnQ9ET47 871 aa21.63■■□□□ 1.05
Shroom3-204ENSMUST00000168878 Dnttip2Q8R2M2 758 aaKnown RBP21.61■■□□□ 1.05
Shroom3-204ENSMUST00000168878 Sin3aQ60520 1274 aaKnown RBP21.61■■□□□ 1.05
Shroom3-204ENSMUST00000168878 Cnga1P29974 684 aa21.6■■□□□ 1.05
Shroom3-204ENSMUST00000168878 Zscan21Q07231 555 aa21.6■■□□□ 1.05
Shroom3-204ENSMUST00000168878 Map4P27546 1125 aaKnown RBP21.6■■□□□ 1.05
Shroom3-204ENSMUST00000168878 Speer4f1Q9D5Q6 258 aa21.6■■□□□ 1.05
Shroom3-204ENSMUST00000168878 Kif27Q7M6Z4 1394 aa21.6■■□□□ 1.05
Shroom3-204ENSMUST00000168878 Kdm5dQ62240 1548 aa21.59■■□□□ 1.05
Shroom3-204ENSMUST00000168878 PnnO35691 725 aaKnown RBP21.59■■□□□ 1.05
Shroom3-204ENSMUST00000168878 MccE9PWI3 1003 aa21.59■■□□□ 1.05
Shroom3-204ENSMUST00000168878 1700019A02RikA0A087WPV9 146 aa21.59■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms