RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Map7d2A2AG50 781 aa8.13□□□□□ -1.11
Ubr4-212ENSMUST00000165860 Supt16hQ920B9 1047 aa8.13□□□□□ -1.11
Ubr4-212ENSMUST00000165860 Fgd1P52734 960 aa8.13□□□□□ -1.11
Ubr4-212ENSMUST00000165860 Trim44Q9QXA7 346 aa8.11□□□□□ -1.11
Ubr4-212ENSMUST00000165860 Chic1Q8CBW7 227 aa8.1□□□□□ -1.11
Ubr4-212ENSMUST00000165860 Adam1bQ8R534 806 aa8.1□□□□□ -1.11
Ubr4-212ENSMUST00000165860 Zbtb7cQ8VCZ7 619 aa8.1□□□□□ -1.11
Ubr4-212ENSMUST00000165860 Il27Q8K3I6 234 aa8.1□□□□□ -1.11
Ubr4-212ENSMUST00000165860 Mrs2Q5NCE8 434 aa8.09□□□□□ -1.12
Ubr4-212ENSMUST00000165860 Htatsf1Q8BGC0 757 aa8.08□□□□□ -1.12
Ubr4-212ENSMUST00000165860 P3h3Q8CG70 732 aa8.08□□□□□ -1.12
Ubr4-212ENSMUST00000165860 Ipo4Q8VI75 1082 aa8.08□□□□□ -1.12
Ubr4-212ENSMUST00000165860 PtmsQ9D0J8 101 aaKnown RBP8.07□□□□□ -1.12
Ubr4-212ENSMUST00000165860 TimelessQ9R1X4 1197 aa8.06□□□□□ -1.12
Ubr4-212ENSMUST00000165860 Plcd4Q8K3R3 807 aa8.05□□□□□ -1.12
Ubr4-212ENSMUST00000165860 DekQ7TNV0 380 aaKnown RBP8.05□□□□□ -1.12
Ubr4-212ENSMUST00000165860 Nolc1E9Q5C9 702 aaKnown RBP8.05□□□□□ -1.12
Ubr4-212ENSMUST00000165860 Fam43aQ8BUP8 424 aa8.05□□□□□ -1.12
Ubr4-212ENSMUST00000165860 Rrp12Q6P5B0 1295 aaKnown RBP8.05□□□□□ -1.12
Ubr4-212ENSMUST00000165860 Cep164Q5DU05 1446 aa8.04□□□□□ -1.12
Ubr4-212ENSMUST00000165860 Slc4a3P16283 1227 aa8.03□□□□□ -1.12
Ubr4-212ENSMUST00000165860 Ipo9Q91YE6 1041 aa8.03□□□□□ -1.12
Ubr4-212ENSMUST00000165860 Vsig10D3YX43 558 aa8.03□□□□□ -1.12
Ubr4-212ENSMUST00000165860 Zbtb4Q5F293 982 aa8.01□□□□□ -1.13
Ubr4-212ENSMUST00000165860 Hsp90ab1P11499 724 aaKnown RBP8.01□□□□□ -1.13
Ubr4-212ENSMUST00000165860 Rtn4Q99P72 1162 aaKnown RBP8□□□□□ -1.13
Ubr4-212ENSMUST00000165860 CalrP14211 416 aaKnown RBP8□□□□□ -1.13
Ubr4-212ENSMUST00000165860 Ppm1gQ61074 542 aa8□□□□□ -1.13
Ubr4-212ENSMUST00000165860 Rad21Q61550 635 aaKnown RBP7.99□□□□□ -1.13
Ubr4-212ENSMUST00000165860 Gtf2a1Q99PM3 378 aa7.99□□□□□ -1.13
Ubr4-212ENSMUST00000165860 Gm13697A2AK42 830 aa7.99□□□□□ -1.13
Ubr4-212ENSMUST00000165860 Trim30dE9PWL0 497 aa7.99□□□□□ -1.13
Ubr4-212ENSMUST00000165860 Spryd3E9Q9B3 442 aa7.98□□□□□ -1.13
Ubr4-212ENSMUST00000165860 Lmod2Q3UHZ5 550 aa7.97□□□□□ -1.13
Ubr4-212ENSMUST00000165860 Tcerg1Q8CGF7 1100 aaKnown RBP7.97□□□□□ -1.13
Ubr4-212ENSMUST00000165860 Ddrgk1Q80WW9 315 aa7.97□□□□□ -1.13
Ubr4-212ENSMUST00000165860 Fbxo3Q9DC63 480 aa7.97□□□□□ -1.13
Ubr4-212ENSMUST00000165860 Ofd1Q80Z25 1017 aa7.96□□□□□ -1.14
Ubr4-212ENSMUST00000165860 Arid4bA2CG63 1314 aaKnown RBP7.95□□□□□ -1.14
Ubr4-212ENSMUST00000165860 Clip1Q922J3 1391 aa7.95□□□□□ -1.14
Ubr4-212ENSMUST00000165860 Plcb2A3KGF7 1181 aa7.94□□□□□ -1.14
Ubr4-212ENSMUST00000165860 Prdm10Q3UTQ7 1184 aa7.94□□□□□ -1.14
Ubr4-212ENSMUST00000165860 Stard8Q8K031 1019 aa7.93□□□□□ -1.14
Ubr4-212ENSMUST00000165860 PtmaP26350 111 aa7.93□□□□□ -1.14
Ubr4-212ENSMUST00000165860 Ccer2J3QPU5 274 aa7.92□□□□□ -1.14
Ubr4-212ENSMUST00000165860 Zcchc6Q5BLK4 1491 aaKnown RBP7.92□□□□□ -1.14
Ubr4-212ENSMUST00000165860 Atp1b4Q99ME6 356 aa7.92□□□□□ -1.14
Ubr4-212ENSMUST00000165860 Nlrp6Q91WS2 869 aa7.91□□□□□ -1.14
Ubr4-212ENSMUST00000165860 Erich6D3Z6S9 713 aa7.9□□□□□ -1.14
Ubr4-212ENSMUST00000165860 Tpm2P58774 284 aa7.9□□□□□ -1.14
Ubr4-212ENSMUST00000165860 MsnP26041 577 aaKnown RBP7.89□□□□□ -1.15
Ubr4-212ENSMUST00000165860 B4galnt3Q6L8S8 986 aa7.89□□□□□ -1.15
Ubr4-212ENSMUST00000165860 BbxQ8VBW5 907 aa7.89□□□□□ -1.15
Ubr4-212ENSMUST00000165860 Plppr3Q7TPB0 716 aa7.89□□□□□ -1.15
Ubr4-212ENSMUST00000165860 Dnai1Q8C0M8 701 aa7.89□□□□□ -1.15
Ubr4-212ENSMUST00000165860 Podxl2Q8CAE9 603 aa7.89□□□□□ -1.15
Ubr4-212ENSMUST00000165860 Dbr1Q923B1 550 aa7.89□□□□□ -1.15
Ubr4-212ENSMUST00000165860 IbspQ61711 324 aa7.88□□□□□ -1.15
Ubr4-212ENSMUST00000165860 Sparcl1P70663 650 aa7.88□□□□□ -1.15
Ubr4-212ENSMUST00000165860 Fbxo2Q80UW2 297 aa7.88□□□□□ -1.15
Ubr4-212ENSMUST00000165860 ChgaP26339 463 aaKnown RBP7.87□□□□□ -1.15
Ubr4-212ENSMUST00000165860 Calcoco2A2A6M5 331 aa7.87□□□□□ -1.15
Ubr4-212ENSMUST00000165860 Trim26Q99PN3 545 aa7.86□□□□□ -1.15
Ubr4-212ENSMUST00000165860 Hsp90b1P08113 802 aaKnown RBP7.85□□□□□ -1.15
Ubr4-212ENSMUST00000165860 Erich6bQ9D4S6 220 aa7.85□□□□□ -1.15
Ubr4-212ENSMUST00000165860 Kif20aP97329 887 aa7.85□□□□□ -1.15
Ubr4-212ENSMUST00000165860 Mak16Q8BGS0 296 aaKnown RBP7.85□□□□□ -1.15
Ubr4-212ENSMUST00000165860 VgfQ0VGU4 617 aa7.84□□□□□ -1.15
Ubr4-212ENSMUST00000165860 Ripply1Q2WG77 201 aa7.83□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Ssr1Q9CY50 286 aaKnown RBP7.83□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Phf14Q9D4H9 881 aa7.83□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Gm13695A2AK44 830 aa7.83□□□□□ -1.16
Ubr4-212ENSMUST00000165860 DmtnQ9WV69 405 aa7.82□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Trap1aP19473 224 aa7.81□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Apbb1Q9QXJ1 710 aa7.81□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Abcc9P70170 1546 aa7.81□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Isy1Q69ZQ2 285 aaKnown RBP7.81□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Mbd3Q9Z2D8 285 aaKnown RBP7.8□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Chmp5Q9D7S9 219 aa7.8□□□□□ -1.16
Ubr4-212ENSMUST00000165860 AppP12023 770 aa7.8□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Wwc2Q6NXJ0 1187 aa7.8□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Ush1cQ9ES64 910 aa7.8□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Dusp9Q7TNL7 452 aa7.8□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Becn1O88597 448 aa7.79□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Brd2Q7JJ13 798 aaKnown RBP7.79□□□□□ -1.16
Ubr4-212ENSMUST00000165860 EspnQ9ET47 871 aa7.79□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Mrvi1Q9WUX5 899 aaKnown RBP7.79□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Ccar1Q8CH18 1146 aaKnown RBP7.78□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Rsph6aQ8CDR2 708 aa7.78□□□□□ -1.16
Ubr4-212ENSMUST00000165860 Pak3Q61036 559 aa7.77□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Mre11Q61216 706 aa7.77□□□□□ -1.17
Ubr4-212ENSMUST00000165860 SetQ9EQU5 289 aaKnown RBP7.77□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Ipo8Q7TMY7 1010 aa7.76□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Plagl1Q9JLQ4 704 aa7.75□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Arid4aF8VPQ2 1261 aaKnown RBP7.75□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Dusp27Q148W8 1138 aa7.75□□□□□ -1.17
Ubr4-212ENSMUST00000165860 SlkO54988 1233 aa7.75□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Sart3Q9JLI8 962 aaKnown RBP7.74□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Znf710Q3U288 666 aa7.74□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Map7O88735 730 aa7.74□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms