RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Vsig10D3YX43 558 aa20.84■□□□□ 0.93
Ubr2-201ENSMUST00000113335 BlmO88700 1416 aa20.76■□□□□ 0.91
Ubr2-201ENSMUST00000113335 Plppr3Q7TPB0 716 aa20.75■□□□□ 0.91
Ubr2-201ENSMUST00000113335 1700123L14RikQ3V2K7 440 aa20.72■□□□□ 0.91
Ubr2-201ENSMUST00000113335 Trim26Q99PN3 545 aa20.72■□□□□ 0.91
Ubr2-201ENSMUST00000113335 Fam71e1A1L3C1 212 aa20.71■□□□□ 0.91
Ubr2-201ENSMUST00000113335 CanxP35564 591 aaKnown RBP20.71■□□□□ 0.91
Ubr2-201ENSMUST00000113335 Aebp2Q9Z248 504 aaKnown RBP20.69■□□□□ 0.9
Ubr2-201ENSMUST00000113335 Hsp90ab1P11499 724 aaKnown RBP20.67■□□□□ 0.9
Ubr2-201ENSMUST00000113335 Ccdc9Q8VC31 543 aaKnown RBP20.67■□□□□ 0.9
Ubr2-201ENSMUST00000113335 Fgd1P52734 960 aa20.67■□□□□ 0.9
Ubr2-201ENSMUST00000113335 P3h3Q8CG70 732 aa20.65■□□□□ 0.9
Ubr2-201ENSMUST00000113335 Trim30dE9PWL0 497 aa20.65■□□□□ 0.9
Ubr2-201ENSMUST00000113335 Trim44Q9QXA7 346 aa20.64■□□□□ 0.9
Ubr2-201ENSMUST00000113335 Rgl3Q3UYI5 709 aa20.61■□□□□ 0.89
Ubr2-201ENSMUST00000113335 Clstn2Q9ER65 966 aa20.59■□□□□ 0.89
Ubr2-201ENSMUST00000113335 Ofd1Q80Z25 1017 aa20.59■□□□□ 0.89
Ubr2-201ENSMUST00000113335 Ubl4bQ9CQ84 188 aa20.59■□□□□ 0.89
Ubr2-201ENSMUST00000113335 Arid4bA2CG63 1314 aaKnown RBP20.58■□□□□ 0.89
Ubr2-201ENSMUST00000113335 Setd5Q5XJV7 1441 aa20.55■□□□□ 0.88
Ubr2-201ENSMUST00000113335 Rb1cc1Q9ESK9 1588 aa20.53■□□□□ 0.88
Ubr2-201ENSMUST00000113335 Apbb1Q9QXJ1 710 aa20.49■□□□□ 0.87
Ubr2-201ENSMUST00000113335 PtmaP26350 111 aa20.48■□□□□ 0.87
Ubr2-201ENSMUST00000113335 Plcb2A3KGF7 1181 aa20.43■□□□□ 0.86
Ubr2-201ENSMUST00000113335 Irx6Q9ER75 438 aa20.43■□□□□ 0.86
Ubr2-201ENSMUST00000113335 Ccdc27Q3V036 639 aa20.42■□□□□ 0.86
Ubr2-201ENSMUST00000113335 Grwd1Q810D6 446 aaKnown RBP20.42■□□□□ 0.86
Ubr2-201ENSMUST00000113335 Neurod2Q62414 383 aa20.37■□□□□ 0.85
Ubr2-201ENSMUST00000113335 Kdm2aP59997 1161 aa20.37■□□□□ 0.85
Ubr2-201ENSMUST00000113335 Htatsf1Q8BGC0 757 aa20.36■□□□□ 0.85
Ubr2-201ENSMUST00000113335 Card11Q8CIS0 1159 aa20.35■□□□□ 0.85
Ubr2-201ENSMUST00000113335 Dbr1Q923B1 550 aa20.35■□□□□ 0.85
Ubr2-201ENSMUST00000113335 Safb2Q80YR5 991 aaKnown RBP20.34■□□□□ 0.85
Ubr2-201ENSMUST00000113335 SafbD3YXK2 937 aaKnown RBP20.32■□□□□ 0.84
Ubr2-201ENSMUST00000113335 Ppm1gQ61074 542 aa20.29■□□□□ 0.84
Ubr2-201ENSMUST00000113335 IqubQ8CDK3 788 aa20.27■□□□□ 0.84
Ubr2-201ENSMUST00000113335 Armcx1Q9CX83 456 aa20.27■□□□□ 0.84
Ubr2-201ENSMUST00000113335 Spryd3E9Q9B3 442 aa20.26■□□□□ 0.83
Ubr2-201ENSMUST00000113335 B4galnt3Q6L8S8 986 aa20.26■□□□□ 0.83
Ubr2-201ENSMUST00000113335 Srpk2O54781 681 aaKnown RBP20.25■□□□□ 0.83
Ubr2-201ENSMUST00000113335 Mroh3A0A1D5RM54 893 aa20.24■□□□□ 0.83
Ubr2-201ENSMUST00000113335 Cwc22Q8C5N3 908 aaKnown RBP20.24■□□□□ 0.83
Ubr2-201ENSMUST00000113335 Mapk8ip3Q9ESN9 1337 aa20.22■□□□□ 0.83
Ubr2-201ENSMUST00000113335 Eea1Q8BL66 1411 aa20.21■□□□□ 0.83
Ubr2-201ENSMUST00000113335 Exosc9Q9JHI7 438 aaKnown RBP20.21■□□□□ 0.83
Ubr2-201ENSMUST00000113335 Gm20521D3Z5F7 333 aa20.2■□□□□ 0.82
Ubr2-201ENSMUST00000113335 Gm6268A2A3U9 297 aa20.2■□□□□ 0.82
Ubr2-201ENSMUST00000113335 Slc4a3P16283 1227 aa20.19■□□□□ 0.82
Ubr2-201ENSMUST00000113335 Bcl11aQ9QYE3 773 aa20.18■□□□□ 0.82
Ubr2-201ENSMUST00000113335 Golga3P55937 1487 aa20.18■□□□□ 0.82
Ubr2-201ENSMUST00000113335 Map7O88735 730 aa20.15■□□□□ 0.82
Ubr2-201ENSMUST00000113335 Kif15Q6P9L6 1387 aa20.13■□□□□ 0.81
Ubr2-201ENSMUST00000113335 Znf326O88291 580 aa20.12■□□□□ 0.81
Ubr2-201ENSMUST00000113335 Irx3P81067 507 aa20.12■□□□□ 0.81
Ubr2-201ENSMUST00000113335 Wwc2Q6NXJ0 1187 aa20.11■□□□□ 0.81
Ubr2-201ENSMUST00000113335 Casc1Q6TDU8 730 aa20.1■□□□□ 0.81
Ubr2-201ENSMUST00000113335 Arhgap27A2AB59 869 aa20.09■□□□□ 0.81
Ubr2-201ENSMUST00000113335 Rrp7aQ9D1C9 280 aaKnown RBP20.09■□□□□ 0.81
Ubr2-201ENSMUST00000113335 1700019A02RikA0A087WPV9 146 aa20.07■□□□□ 0.8
Ubr2-201ENSMUST00000113335 Hspa5P20029 655 aaKnown RBP20.07■□□□□ 0.8
Ubr2-201ENSMUST00000113335 Mtus2Q3UHD3 1353 aa20.06■□□□□ 0.8
Ubr2-201ENSMUST00000113335 Rsf1E9PWW9 1441 aaKnown RBP20.06■□□□□ 0.8
Ubr2-201ENSMUST00000113335 Rtn4Q99P72 1162 aaKnown RBP20.06■□□□□ 0.8
Ubr2-201ENSMUST00000113335 Stk24Q99KH8 431 aa20.06■□□□□ 0.8
Ubr2-201ENSMUST00000113335 Stag3O70576 1240 aa20.05■□□□□ 0.8
Ubr2-201ENSMUST00000113335 Chmp4bQ9D8B3 224 aaKnown RBP20.05■□□□□ 0.8
Ubr2-201ENSMUST00000113335 Cnga1P29974 684 aa20.04■□□□□ 0.8
Ubr2-201ENSMUST00000113335 PnnO35691 725 aaKnown RBP20.04■□□□□ 0.8
Ubr2-201ENSMUST00000113335 Hsp90b1P08113 802 aaKnown RBP20.03■□□□□ 0.8
Ubr2-201ENSMUST00000113335 NgefQ8CHT1 710 aa20.03■□□□□ 0.8
Ubr2-201ENSMUST00000113335 Supt16hQ920B9 1047 aa20.03■□□□□ 0.8
Ubr2-201ENSMUST00000113335 NudcO35685 332 aaKnown RBP20.02■□□□□ 0.8
Ubr2-201ENSMUST00000113335 Rwdd1Q9CQK7 243 aa20.02■□□□□ 0.8
Ubr2-201ENSMUST00000113335 Pes1Q9EQ61 584 aaKnown RBP20.01■□□□□ 0.79
Ubr2-201ENSMUST00000113335 Mia2Q91ZV0 1396 aa20.01■□□□□ 0.79
Ubr2-201ENSMUST00000113335 Tcerg1Q8CGF7 1100 aaKnown RBP20■□□□□ 0.79
Ubr2-201ENSMUST00000113335 Dnttip2Q8R2M2 758 aaKnown RBP20■□□□□ 0.79
Ubr2-201ENSMUST00000113335 Mbd3Q9Z2D8 285 aaKnown RBP20■□□□□ 0.79
Ubr2-201ENSMUST00000113335 Clstn1Q9EPL2 979 aa19.98■□□□□ 0.79
Ubr2-201ENSMUST00000113335 KnstrnQ9D9Z1 312 aaKnown RBP19.98■□□□□ 0.79
Ubr2-201ENSMUST00000113335 Erich6bQ9D4S6 220 aa19.98■□□□□ 0.79
Ubr2-201ENSMUST00000113335 Adam1bQ8R534 806 aa19.97■□□□□ 0.79
Ubr2-201ENSMUST00000113335 Iqcf3Q9D498 203 aa19.97■□□□□ 0.79
Ubr2-201ENSMUST00000113335 Ccdc18Q640L5 1455 aa19.96■□□□□ 0.79
Ubr2-201ENSMUST00000113335 Znf316Q6PGE4 1016 aa19.95■□□□□ 0.78
Ubr2-201ENSMUST00000113335 AU015836B2RUM3 263 aa19.94■□□□□ 0.78
Ubr2-201ENSMUST00000113335 Chmp5Q9D7S9 219 aa19.93■□□□□ 0.78
Ubr2-201ENSMUST00000113335 Baz1aO88379 1555 aa19.92■□□□□ 0.78
Ubr2-201ENSMUST00000113335 Dnai1Q8C0M8 701 aa19.91■□□□□ 0.78
Ubr2-201ENSMUST00000113335 Exoc6Q8R313 802 aa19.91■□□□□ 0.78
Ubr2-201ENSMUST00000113335 NacadQ5SWP3 1504 aa19.91■□□□□ 0.78
Ubr2-201ENSMUST00000113335 MccE9PWI3 1003 aa19.9■□□□□ 0.78
Ubr2-201ENSMUST00000113335 Speer4f1Q9D5Q6 258 aa19.9■□□□□ 0.78
Ubr2-201ENSMUST00000113335 Rundc1Q0VDN7 615 aa19.89■□□□□ 0.77
Ubr2-201ENSMUST00000113335 Sin3aQ60520 1274 aaKnown RBP19.89■□□□□ 0.77
Ubr2-201ENSMUST00000113335 Sh3bp5Q9Z131 463 aa19.87■□□□□ 0.77
Ubr2-201ENSMUST00000113335 Tnnt2P50752 301 aa19.86■□□□□ 0.77
Ubr2-201ENSMUST00000113335 EspnQ9ET47 871 aa19.85■□□□□ 0.77
Ubr2-201ENSMUST00000113335 Pcmtd1P59913 357 aa19.85■□□□□ 0.77
Ubr2-201ENSMUST00000113335 Pkd2O35245 966 aa19.84■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms