RNA–Protein interactions for RNA: ENSMUST00000112390.7

Chd4-202, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd4, Length 6,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-202ENSMUST00000112390 Fgd1P52734 960 aa20.66■□□□□ 0.9
Chd4-202ENSMUST00000112390 Wdr43Q6ZQL4 677 aaKnown RBP20.65■□□□□ 0.9
Chd4-202ENSMUST00000112390 DekQ7TNV0 380 aaKnown RBP20.65■□□□□ 0.9
Chd4-202ENSMUST00000112390 Trim26Q99PN3 545 aa20.65■□□□□ 0.9
Chd4-202ENSMUST00000112390 Clstn2Q9ER65 966 aa20.64■□□□□ 0.9
Chd4-202ENSMUST00000112390 Vsig10D3YX43 558 aa20.64■□□□□ 0.89
Chd4-202ENSMUST00000112390 P3h3Q8CG70 732 aa20.63■□□□□ 0.89
Chd4-202ENSMUST00000112390 Ythdc1E9Q5K9 736 aaKnown RBP20.61■□□□□ 0.89
Chd4-202ENSMUST00000112390 Rgl3Q3UYI5 709 aa20.53■□□□□ 0.88
Chd4-202ENSMUST00000112390 Lmod3E9QA62 571 aa20.53■□□□□ 0.88
Chd4-202ENSMUST00000112390 Rb1cc1Q9ESK9 1588 aa20.51■□□□□ 0.87
Chd4-202ENSMUST00000112390 Irx6Q9ER75 438 aa20.5■□□□□ 0.87
Chd4-202ENSMUST00000112390 Setd5Q5XJV7 1441 aa20.47■□□□□ 0.87
Chd4-202ENSMUST00000112390 Hsp90ab1P11499 724 aaKnown RBP20.45■□□□□ 0.86
Chd4-202ENSMUST00000112390 Trim30dE9PWL0 497 aa20.42■□□□□ 0.86
Chd4-202ENSMUST00000112390 CanxP35564 591 aaKnown RBP20.41■□□□□ 0.86
Chd4-202ENSMUST00000112390 Arid4bA2CG63 1314 aaKnown RBP20.39■□□□□ 0.85
Chd4-202ENSMUST00000112390 Kdm2aP59997 1161 aa20.38■□□□□ 0.85
Chd4-202ENSMUST00000112390 Trim44Q9QXA7 346 aa20.37■□□□□ 0.85
Chd4-202ENSMUST00000112390 Ofd1Q80Z25 1017 aa20.36■□□□□ 0.85
Chd4-202ENSMUST00000112390 IqubQ8CDK3 788 aa20.35■□□□□ 0.85
Chd4-202ENSMUST00000112390 Grwd1Q810D6 446 aaKnown RBP20.35■□□□□ 0.85
Chd4-202ENSMUST00000112390 Apbb1Q9QXJ1 710 aa20.32■□□□□ 0.84
Chd4-202ENSMUST00000112390 Srpk2O54781 681 aaKnown RBP20.29■□□□□ 0.84
Chd4-202ENSMUST00000112390 PtmaP26350 111 aa20.27■□□□□ 0.83
Chd4-202ENSMUST00000112390 Aebp2Q9Z248 504 aaKnown RBP20.27■□□□□ 0.83
Chd4-202ENSMUST00000112390 Exosc9Q9JHI7 438 aaKnown RBP20.26■□□□□ 0.83
Chd4-202ENSMUST00000112390 Znf326O88291 580 aa20.25■□□□□ 0.83
Chd4-202ENSMUST00000112390 Neurod2Q62414 383 aa20.25■□□□□ 0.83
Chd4-202ENSMUST00000112390 Card11Q8CIS0 1159 aa20.25■□□□□ 0.83
Chd4-202ENSMUST00000112390 Mroh3A0A1D5RM54 893 aa20.25■□□□□ 0.83
Chd4-202ENSMUST00000112390 Gm20521D3Z5F7 333 aa20.23■□□□□ 0.83
Chd4-202ENSMUST00000112390 Arhgap27A2AB59 869 aa20.23■□□□□ 0.83
Chd4-202ENSMUST00000112390 Kif15Q6P9L6 1387 aa20.21■□□□□ 0.83
Chd4-202ENSMUST00000112390 Ccdc9Q8VC31 543 aaKnown RBP20.2■□□□□ 0.82
Chd4-202ENSMUST00000112390 Plcb2A3KGF7 1181 aa20.19■□□□□ 0.82
Chd4-202ENSMUST00000112390 Mapk8ip3Q9ESN9 1337 aa20.19■□□□□ 0.82
Chd4-202ENSMUST00000112390 NgefQ8CHT1 710 aa20.17■□□□□ 0.82
Chd4-202ENSMUST00000112390 Fam71e1A1L3C1 212 aa20.16■□□□□ 0.82
Chd4-202ENSMUST00000112390 Rtn4Q99P72 1162 aaKnown RBP20.16■□□□□ 0.82
Chd4-202ENSMUST00000112390 Rsf1E9PWW9 1441 aaKnown RBP20.14■□□□□ 0.82
Chd4-202ENSMUST00000112390 Gm6268A2A3U9 297 aa20.14■□□□□ 0.81
Chd4-202ENSMUST00000112390 Rrp7aQ9D1C9 280 aaKnown RBP20.14■□□□□ 0.81
Chd4-202ENSMUST00000112390 Stk24Q99KH8 431 aa20.12■□□□□ 0.81
Chd4-202ENSMUST00000112390 Eea1Q8BL66 1411 aa20.11■□□□□ 0.81
Chd4-202ENSMUST00000112390 Armcx1Q9CX83 456 aa20.1■□□□□ 0.81
Chd4-202ENSMUST00000112390 Cwc22Q8C5N3 908 aaKnown RBP20.1■□□□□ 0.81
Chd4-202ENSMUST00000112390 Dbr1Q923B1 550 aa20.1■□□□□ 0.81
Chd4-202ENSMUST00000112390 Stag3O70576 1240 aa20.1■□□□□ 0.81
Chd4-202ENSMUST00000112390 Htatsf1Q8BGC0 757 aa20.08■□□□□ 0.8
Chd4-202ENSMUST00000112390 Golga3P55937 1487 aa20.07■□□□□ 0.8
Chd4-202ENSMUST00000112390 Ccdc18Q640L5 1455 aa20.06■□□□□ 0.8
Chd4-202ENSMUST00000112390 1700019A02RikA0A087WPV9 146 aa20.06■□□□□ 0.8
Chd4-202ENSMUST00000112390 Mtus2Q3UHD3 1353 aa20.06■□□□□ 0.8
Chd4-202ENSMUST00000112390 Clstn1Q9EPL2 979 aa20.06■□□□□ 0.8
Chd4-202ENSMUST00000112390 MyclP10166 368 aa20.03■□□□□ 0.8
Chd4-202ENSMUST00000112390 1700123L14RikQ3V2K7 440 aa20.02■□□□□ 0.8
Chd4-202ENSMUST00000112390 Cnga1P29974 684 aa20.02■□□□□ 0.8
Chd4-202ENSMUST00000112390 PnnO35691 725 aaKnown RBP20.01■□□□□ 0.79
Chd4-202ENSMUST00000112390 Map7O88735 730 aa20■□□□□ 0.79
Chd4-202ENSMUST00000112390 Iqcf3Q9D498 203 aa20■□□□□ 0.79
Chd4-202ENSMUST00000112390 Ppm1gQ61074 542 aa20■□□□□ 0.79
Chd4-202ENSMUST00000112390 Pes1Q9EQ61 584 aaKnown RBP20■□□□□ 0.79
Chd4-202ENSMUST00000112390 Ercc6F8VPZ5 1481 aa20■□□□□ 0.79
Chd4-202ENSMUST00000112390 B4galnt3Q6L8S8 986 aa19.99■□□□□ 0.79
Chd4-202ENSMUST00000112390 Chmp4bQ9D8B3 224 aaKnown RBP19.98■□□□□ 0.79
Chd4-202ENSMUST00000112390 NacadQ5SWP3 1504 aa19.98■□□□□ 0.79
Chd4-202ENSMUST00000112390 NudcO35685 332 aaKnown RBP19.97■□□□□ 0.79
Chd4-202ENSMUST00000112390 Ccdc27Q3V036 639 aa19.97■□□□□ 0.79
Chd4-202ENSMUST00000112390 Hsp90b1P08113 802 aaKnown RBP19.95■□□□□ 0.78
Chd4-202ENSMUST00000112390 Spryd3E9Q9B3 442 aa19.95■□□□□ 0.78
Chd4-202ENSMUST00000112390 Casc1Q6TDU8 730 aa19.93■□□□□ 0.78
Chd4-202ENSMUST00000112390 Mia2Q91ZV0 1396 aa19.88■□□□□ 0.77
Chd4-202ENSMUST00000112390 Baz1aO88379 1555 aa19.86■□□□□ 0.77
Chd4-202ENSMUST00000112390 Zfp777B9EKF4 885 aa19.85■□□□□ 0.77
Chd4-202ENSMUST00000112390 Wwc2Q6NXJ0 1187 aa19.85■□□□□ 0.77
Chd4-202ENSMUST00000112390 Sh3bp5Q9Z131 463 aa19.85■□□□□ 0.77
Chd4-202ENSMUST00000112390 Hspa5P20029 655 aaKnown RBP19.85■□□□□ 0.77
Chd4-202ENSMUST00000112390 Slc4a3P16283 1227 aa19.84■□□□□ 0.77
Chd4-202ENSMUST00000112390 Rwdd1Q9CQK7 243 aa19.83■□□□□ 0.76
Chd4-202ENSMUST00000112390 KnstrnQ9D9Z1 312 aaKnown RBP19.83■□□□□ 0.76
Chd4-202ENSMUST00000112390 SafbD3YXK2 937 aaKnown RBP19.81■□□□□ 0.76
Chd4-202ENSMUST00000112390 MccE9PWI3 1003 aa19.8■□□□□ 0.76
Chd4-202ENSMUST00000112390 Ecm2Q5FW85 670 aa19.79■□□□□ 0.76
Chd4-202ENSMUST00000112390 U2surpQ6NV83 1029 aaKnown RBP19.78■□□□□ 0.76
Chd4-202ENSMUST00000112390 Mbd3Q9Z2D8 285 aaKnown RBP19.78■□□□□ 0.76
Chd4-202ENSMUST00000112390 Plin1Q8CGN5 517 aa19.77■□□□□ 0.76
Chd4-202ENSMUST00000112390 Rundc1Q0VDN7 615 aa19.77■□□□□ 0.75
Chd4-202ENSMUST00000112390 Map4P27546 1125 aaKnown RBP19.76■□□□□ 0.75
Chd4-202ENSMUST00000112390 Rtf1A2AQ19 715 aaKnown RBP19.75■□□□□ 0.75
Chd4-202ENSMUST00000112390 Adam1bQ8R534 806 aa19.75■□□□□ 0.75
Chd4-202ENSMUST00000112390 Speer4f1Q9D5Q6 258 aa19.75■□□□□ 0.75
Chd4-202ENSMUST00000112390 Fhad1A6PWD2 1420 aa19.75■□□□□ 0.75
Chd4-202ENSMUST00000112390 HnrnpuQ8VEK3 800 aaKnown RBP19.75■□□□□ 0.75
Chd4-202ENSMUST00000112390 Rassf8Q8CJ96 419 aa19.74■□□□□ 0.75
Chd4-202ENSMUST00000112390 Stk26Q99JT2 416 aa19.74■□□□□ 0.75
Chd4-202ENSMUST00000112390 Ppp1r18Q8BQ30 594 aa19.73■□□□□ 0.75
Chd4-202ENSMUST00000112390 Pkd2O35245 966 aa19.72■□□□□ 0.75
Chd4-202ENSMUST00000112390 Ifit1bl1D3Z6F0 470 aa19.71■□□□□ 0.75
Chd4-202ENSMUST00000112390 Anapc15P60007 132 aa19.7■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 9 ms