RNA–Protein interactions for RNA: ENSMUST00000112070.7

Col7a1-202, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col7a1, Length 9,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-202ENSMUST00000112070 Clip1Q922J3 1391 aa18.38■□□□□ 0.53
Col7a1-202ENSMUST00000112070 Ppm1gQ61074 542 aa18.38■□□□□ 0.53
Col7a1-202ENSMUST00000112070 Gm35339A0A140LHH9 1649 aa18.37■□□□□ 0.53
Col7a1-202ENSMUST00000112070 Trim30dE9PWL0 497 aa18.35■□□□□ 0.53
Col7a1-202ENSMUST00000112070 Map7O88735 730 aa18.35■□□□□ 0.53
Col7a1-202ENSMUST00000112070 Gm973E9Q295 1059 aa18.34■□□□□ 0.53
Col7a1-202ENSMUST00000112070 Zfp777B9EKF4 885 aa18.33■□□□□ 0.52
Col7a1-202ENSMUST00000112070 PtmsQ9D0J8 101 aaKnown RBP18.33■□□□□ 0.52
Col7a1-202ENSMUST00000112070 Zbtb4Q5F293 982 aa18.31■□□□□ 0.52
Col7a1-202ENSMUST00000112070 SetQ9EQU5 289 aaKnown RBP18.29■□□□□ 0.52
Col7a1-202ENSMUST00000112070 Casc1Q6TDU8 730 aa18.27■□□□□ 0.51
Col7a1-202ENSMUST00000112070 AU015836B2RUM3 263 aa18.25■□□□□ 0.51
Col7a1-202ENSMUST00000112070 Prdm10Q3UTQ7 1184 aa18.25■□□□□ 0.51
Col7a1-202ENSMUST00000112070 Vsig10D3YX43 558 aa18.24■□□□□ 0.51
Col7a1-202ENSMUST00000112070 Mak16Q8BGS0 296 aaKnown RBP18.24■□□□□ 0.51
Col7a1-202ENSMUST00000112070 Mbd3Q9Z2D8 285 aaKnown RBP18.23■□□□□ 0.51
Col7a1-202ENSMUST00000112070 Irx3P81067 507 aa18.22■□□□□ 0.51
Col7a1-202ENSMUST00000112070 Mrs2Q5NCE8 434 aa18.21■□□□□ 0.51
Col7a1-202ENSMUST00000112070 Plcb2A3KGF7 1181 aa18.21■□□□□ 0.51
Col7a1-202ENSMUST00000112070 Rad21Q61550 635 aaKnown RBP18.2■□□□□ 0.5
Col7a1-202ENSMUST00000112070 MsnP26041 577 aaKnown RBP18.15■□□□□ 0.5
Col7a1-202ENSMUST00000112070 Rb1cc1Q9ESK9 1588 aa18.14■□□□□ 0.5
Col7a1-202ENSMUST00000112070 Map7d2A2AG50 781 aa18.14■□□□□ 0.49
Col7a1-202ENSMUST00000112070 Wwc2Q6NXJ0 1187 aa18.14■□□□□ 0.49
Col7a1-202ENSMUST00000112070 MccE9PWI3 1003 aa18.14■□□□□ 0.49
Col7a1-202ENSMUST00000112070 Sall2Q9QX96 1004 aa18.13■□□□□ 0.49
Col7a1-202ENSMUST00000112070 Eid3Q3V124 375 aa18.12■□□□□ 0.49
Col7a1-202ENSMUST00000112070 KnstrnQ9D9Z1 312 aaKnown RBP18.11■□□□□ 0.49
Col7a1-202ENSMUST00000112070 Mapk8ip2Q9ERE9 830 aa18.11■□□□□ 0.49
Col7a1-202ENSMUST00000112070 4933402E13RikQ9D4D2 429 aa18.1■□□□□ 0.49
Col7a1-202ENSMUST00000112070 Gm38655A0A286YDK6 273 aa18.08■□□□□ 0.48
Col7a1-202ENSMUST00000112070 Pde3bQ61409 1100 aa18.08■□□□□ 0.48
Col7a1-202ENSMUST00000112070 Cwc22Q8C5N3 908 aaKnown RBP18.07■□□□□ 0.48
Col7a1-202ENSMUST00000112070 Cald1E9QA15 768 aaKnown RBP18.07■□□□□ 0.48
Col7a1-202ENSMUST00000112070 Rangap1P46061 589 aaKnown RBP18.06■□□□□ 0.48
Col7a1-202ENSMUST00000112070 Pes1Q9EQ61 584 aaKnown RBP18.05■□□□□ 0.48
Col7a1-202ENSMUST00000112070 Iqcf3Q9D498 203 aa18.05■□□□□ 0.48
Col7a1-202ENSMUST00000112070 Ofd1Q80Z25 1017 aa18.04■□□□□ 0.48
Col7a1-202ENSMUST00000112070 IqubQ8CDK3 788 aa18.03■□□□□ 0.48
Col7a1-202ENSMUST00000112070 Znf316Q6PGE4 1016 aa18.03■□□□□ 0.48
Col7a1-202ENSMUST00000112070 RdxP26043 583 aaKnown RBP18.02■□□□□ 0.47
Col7a1-202ENSMUST00000112070 Ifnlr1Q8CGK5 535 aa18.01■□□□□ 0.47
Col7a1-202ENSMUST00000112070 BlmO88700 1416 aa18.01■□□□□ 0.47
Col7a1-202ENSMUST00000112070 NudcO35685 332 aaKnown RBP18.01■□□□□ 0.47
Col7a1-202ENSMUST00000112070 Mapk8ip3Q9ESN9 1337 aa18■□□□□ 0.47
Col7a1-202ENSMUST00000112070 Dnai2A2AC93 623 aa17.99■□□□□ 0.47
Col7a1-202ENSMUST00000112070 Tpm3-rs7D3Z2H9 248 aa17.98■□□□□ 0.47
Col7a1-202ENSMUST00000112070 Fam71e1A1L3C1 212 aa17.98■□□□□ 0.47
Col7a1-202ENSMUST00000112070 Eif4g2Q62448 906 aaKnown RBP17.97■□□□□ 0.47
Col7a1-202ENSMUST00000112070 Erich6bQ9D4S6 220 aa17.96■□□□□ 0.47
Col7a1-202ENSMUST00000112070 Rrp12Q6P5B0 1295 aaKnown RBP17.95■□□□□ 0.46
Col7a1-202ENSMUST00000112070 Gm6268A2A3U9 297 aa17.94■□□□□ 0.46
Col7a1-202ENSMUST00000112070 HnrnpuQ8VEK3 800 aaKnown RBP17.94■□□□□ 0.46
Col7a1-202ENSMUST00000112070 Safb2Q80YR5 991 aaKnown RBP17.94■□□□□ 0.46
Col7a1-202ENSMUST00000112070 Bcl11aQ9QYE3 773 aa17.93■□□□□ 0.46
Col7a1-202ENSMUST00000112070 Trim26Q99PN3 545 aa17.91■□□□□ 0.46
Col7a1-202ENSMUST00000112070 Dnttip2Q8R2M2 758 aaKnown RBP17.89■□□□□ 0.45
Col7a1-202ENSMUST00000112070 Exosc9Q9JHI7 438 aaKnown RBP17.87■□□□□ 0.45
Col7a1-202ENSMUST00000112070 R3hcc1Q8BSI6 488 aa17.87■□□□□ 0.45
Col7a1-202ENSMUST00000112070 Arid4bA2CG63 1314 aaKnown RBP17.86■□□□□ 0.45
Col7a1-202ENSMUST00000112070 Ddrgk1Q80WW9 315 aa17.86■□□□□ 0.45
Col7a1-202ENSMUST00000112070 Dusp9Q7TNL7 452 aa17.86■□□□□ 0.45
Col7a1-202ENSMUST00000112070 Mia2Q91ZV0 1396 aa17.85■□□□□ 0.45
Col7a1-202ENSMUST00000112070 Smarce1O54941 411 aaKnown RBP17.84■□□□□ 0.45
Col7a1-202ENSMUST00000112070 Sh3bp5Q9Z131 463 aa17.83■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Hsp90b1P08113 802 aaKnown RBP17.82■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Tcerg1Q8CGF7 1100 aaKnown RBP17.8■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Ftsj3Q9DBE9 838 aaKnown RBP17.8■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Fhad1A6PWD2 1420 aa17.79■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Srpk2O54781 681 aaKnown RBP17.79■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Anapc15P60007 132 aa17.78■□□□□ 0.44
Col7a1-202ENSMUST00000112070 P3h3Q8CG70 732 aa17.78■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Rwdd1Q9CQK7 243 aa17.78■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Abcc8B2RUS7 1588 aa17.78■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Cspp1B2RX88 1205 aa17.78■□□□□ 0.44
Col7a1-202ENSMUST00000112070 1700123L14RikQ3V2K7 440 aa17.78■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Becn1O88597 448 aa17.78■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Dnai1Q8C0M8 701 aa17.78■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Zrsr2Q62377 462 aaKnown RBP17.77■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Setd5Q5XJV7 1441 aa17.77■□□□□ 0.44
Col7a1-202ENSMUST00000112070 Sart3Q9JLI8 962 aaKnown RBP17.76■□□□□ 0.43
Col7a1-202ENSMUST00000112070 Rgl3Q3UYI5 709 aa17.75■□□□□ 0.43
Col7a1-202ENSMUST00000112070 Glipr1l2Q9CQ35 332 aa17.75■□□□□ 0.43
Col7a1-202ENSMUST00000112070 Eea1Q8BL66 1411 aa17.74■□□□□ 0.43
Col7a1-202ENSMUST00000112070 Card11Q8CIS0 1159 aa17.74■□□□□ 0.43
Col7a1-202ENSMUST00000112070 Chic2Q9D9G3 165 aa17.74■□□□□ 0.43
Col7a1-202ENSMUST00000112070 Atp6v1dP57746 247 aa17.74■□□□□ 0.43
Col7a1-202ENSMUST00000112070 Tpm3P21107 285 aaKnown RBP17.73■□□□□ 0.43
Col7a1-202ENSMUST00000112070 Pcmtd1P59913 357 aa17.73■□□□□ 0.43
Col7a1-202ENSMUST00000112070 VgfQ0VGU4 617 aa17.72■□□□□ 0.43
Col7a1-202ENSMUST00000112070 Ccdc18Q640L5 1455 aa17.72■□□□□ 0.43
Col7a1-202ENSMUST00000112070 EspnQ9ET47 871 aa17.71■□□□□ 0.43
Col7a1-202ENSMUST00000112070 Fkbp15Q6P9Q6 1216 aaKnown RBP17.71■□□□□ 0.42
Col7a1-202ENSMUST00000112070 Ush1cQ9ES64 910 aa17.7■□□□□ 0.42
Col7a1-202ENSMUST00000112070 Trim30aP15533 496 aa17.7■□□□□ 0.42
Col7a1-202ENSMUST00000112070 Kiaa0754Q69ZZ9 979 aa17.7■□□□□ 0.42
Col7a1-202ENSMUST00000112070 CalrP14211 416 aaKnown RBP17.69■□□□□ 0.42
Col7a1-202ENSMUST00000112070 Mtus2Q3UHD3 1353 aa17.68■□□□□ 0.42
Col7a1-202ENSMUST00000112070 Rassf8Q8CJ96 419 aa17.68■□□□□ 0.42
Col7a1-202ENSMUST00000112070 Ipo9Q91YE6 1041 aa17.68■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 66.7 ms