RNA–Protein interactions for RNA: ENSMUST00000112070.7

Col7a1-202, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col7a1, Length 9,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-202ENSMUST00000112070 Clip1Q922J3 1391 aa18,38■□□□□ 0,53
Col7a1-202ENSMUST00000112070 Ppm1gQ61074 542 aa18,38■□□□□ 0,53
Col7a1-202ENSMUST00000112070 Gm35339A0A140LHH9 1649 aa18,37■□□□□ 0,53
Col7a1-202ENSMUST00000112070 Trim30dE9PWL0 497 aa18,35■□□□□ 0,53
Col7a1-202ENSMUST00000112070 Map7O88735 730 aa18,35■□□□□ 0,53
Col7a1-202ENSMUST00000112070 Gm973E9Q295 1059 aa18,34■□□□□ 0,53
Col7a1-202ENSMUST00000112070 Zfp777B9EKF4 885 aa18,33■□□□□ 0,52
Col7a1-202ENSMUST00000112070 PtmsQ9D0J8 101 aaKnown RBP18,33■□□□□ 0,52
Col7a1-202ENSMUST00000112070 Zbtb4Q5F293 982 aa18,31■□□□□ 0,52
Col7a1-202ENSMUST00000112070 SetQ9EQU5 289 aaKnown RBP18,29■□□□□ 0,52
Col7a1-202ENSMUST00000112070 Casc1Q6TDU8 730 aa18,27■□□□□ 0,51
Col7a1-202ENSMUST00000112070 AU015836B2RUM3 263 aa18,25■□□□□ 0,51
Col7a1-202ENSMUST00000112070 Prdm10Q3UTQ7 1184 aa18,25■□□□□ 0,51
Col7a1-202ENSMUST00000112070 Vsig10D3YX43 558 aa18,24■□□□□ 0,51
Col7a1-202ENSMUST00000112070 Mak16Q8BGS0 296 aaKnown RBP18,24■□□□□ 0,51
Col7a1-202ENSMUST00000112070 Mbd3Q9Z2D8 285 aaKnown RBP18,23■□□□□ 0,51
Col7a1-202ENSMUST00000112070 Irx3P81067 507 aa18,22■□□□□ 0,51
Col7a1-202ENSMUST00000112070 Mrs2Q5NCE8 434 aa18,21■□□□□ 0,51
Col7a1-202ENSMUST00000112070 Plcb2A3KGF7 1181 aa18,21■□□□□ 0,51
Col7a1-202ENSMUST00000112070 Rad21Q61550 635 aaKnown RBP18,2■□□□□ 0,5
Col7a1-202ENSMUST00000112070 MsnP26041 577 aaKnown RBP18,15■□□□□ 0,5
Col7a1-202ENSMUST00000112070 Rb1cc1Q9ESK9 1588 aa18,14■□□□□ 0,5
Col7a1-202ENSMUST00000112070 Map7d2A2AG50 781 aa18,14■□□□□ 0,49
Col7a1-202ENSMUST00000112070 Wwc2Q6NXJ0 1187 aa18,14■□□□□ 0,49
Col7a1-202ENSMUST00000112070 MccE9PWI3 1003 aa18,14■□□□□ 0,49
Col7a1-202ENSMUST00000112070 Sall2Q9QX96 1004 aa18,13■□□□□ 0,49
Col7a1-202ENSMUST00000112070 Eid3Q3V124 375 aa18,12■□□□□ 0,49
Col7a1-202ENSMUST00000112070 KnstrnQ9D9Z1 312 aaKnown RBP18,11■□□□□ 0,49
Col7a1-202ENSMUST00000112070 Mapk8ip2Q9ERE9 830 aa18,11■□□□□ 0,49
Col7a1-202ENSMUST00000112070 4933402E13RikQ9D4D2 429 aa18,1■□□□□ 0,49
Col7a1-202ENSMUST00000112070 Gm38655A0A286YDK6 273 aa18,08■□□□□ 0,48
Col7a1-202ENSMUST00000112070 Pde3bQ61409 1100 aa18,08■□□□□ 0,48
Col7a1-202ENSMUST00000112070 Cwc22Q8C5N3 908 aaKnown RBP18,07■□□□□ 0,48
Col7a1-202ENSMUST00000112070 Cald1E9QA15 768 aaKnown RBP18,07■□□□□ 0,48
Col7a1-202ENSMUST00000112070 Rangap1P46061 589 aaKnown RBP18,06■□□□□ 0,48
Col7a1-202ENSMUST00000112070 Pes1Q9EQ61 584 aaKnown RBP18,05■□□□□ 0,48
Col7a1-202ENSMUST00000112070 Iqcf3Q9D498 203 aa18,05■□□□□ 0,48
Col7a1-202ENSMUST00000112070 Ofd1Q80Z25 1017 aa18,04■□□□□ 0,48
Col7a1-202ENSMUST00000112070 IqubQ8CDK3 788 aa18,03■□□□□ 0,48
Col7a1-202ENSMUST00000112070 Znf316Q6PGE4 1016 aa18,03■□□□□ 0,48
Col7a1-202ENSMUST00000112070 RdxP26043 583 aaKnown RBP18,02■□□□□ 0,47
Col7a1-202ENSMUST00000112070 Ifnlr1Q8CGK5 535 aa18,01■□□□□ 0,47
Col7a1-202ENSMUST00000112070 BlmO88700 1416 aa18,01■□□□□ 0,47
Col7a1-202ENSMUST00000112070 NudcO35685 332 aaKnown RBP18,01■□□□□ 0,47
Col7a1-202ENSMUST00000112070 Mapk8ip3Q9ESN9 1337 aa18■□□□□ 0,47
Col7a1-202ENSMUST00000112070 Dnai2A2AC93 623 aa17,99■□□□□ 0,47
Col7a1-202ENSMUST00000112070 Tpm3-rs7D3Z2H9 248 aa17,98■□□□□ 0,47
Col7a1-202ENSMUST00000112070 Fam71e1A1L3C1 212 aa17,98■□□□□ 0,47
Col7a1-202ENSMUST00000112070 Eif4g2Q62448 906 aaKnown RBP17,97■□□□□ 0,47
Col7a1-202ENSMUST00000112070 Erich6bQ9D4S6 220 aa17,96■□□□□ 0,47
Col7a1-202ENSMUST00000112070 Rrp12Q6P5B0 1295 aaKnown RBP17,95■□□□□ 0,46
Col7a1-202ENSMUST00000112070 Gm6268A2A3U9 297 aa17,94■□□□□ 0,46
Col7a1-202ENSMUST00000112070 HnrnpuQ8VEK3 800 aaKnown RBP17,94■□□□□ 0,46
Col7a1-202ENSMUST00000112070 Safb2Q80YR5 991 aaKnown RBP17,94■□□□□ 0,46
Col7a1-202ENSMUST00000112070 Bcl11aQ9QYE3 773 aa17,93■□□□□ 0,46
Col7a1-202ENSMUST00000112070 Trim26Q99PN3 545 aa17,91■□□□□ 0,46
Col7a1-202ENSMUST00000112070 Dnttip2Q8R2M2 758 aaKnown RBP17,89■□□□□ 0,45
Col7a1-202ENSMUST00000112070 Exosc9Q9JHI7 438 aaKnown RBP17,87■□□□□ 0,45
Col7a1-202ENSMUST00000112070 R3hcc1Q8BSI6 488 aa17,87■□□□□ 0,45
Col7a1-202ENSMUST00000112070 Arid4bA2CG63 1314 aaKnown RBP17,86■□□□□ 0,45
Col7a1-202ENSMUST00000112070 Ddrgk1Q80WW9 315 aa17,86■□□□□ 0,45
Col7a1-202ENSMUST00000112070 Dusp9Q7TNL7 452 aa17,86■□□□□ 0,45
Col7a1-202ENSMUST00000112070 Mia2Q91ZV0 1396 aa17,85■□□□□ 0,45
Col7a1-202ENSMUST00000112070 Smarce1O54941 411 aaKnown RBP17,84■□□□□ 0,45
Col7a1-202ENSMUST00000112070 Sh3bp5Q9Z131 463 aa17,83■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Hsp90b1P08113 802 aaKnown RBP17,82■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Tcerg1Q8CGF7 1100 aaKnown RBP17,8■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Ftsj3Q9DBE9 838 aaKnown RBP17,8■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Fhad1A6PWD2 1420 aa17,79■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Srpk2O54781 681 aaKnown RBP17,79■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Anapc15P60007 132 aa17,78■□□□□ 0,44
Col7a1-202ENSMUST00000112070 P3h3Q8CG70 732 aa17,78■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Rwdd1Q9CQK7 243 aa17,78■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Abcc8B2RUS7 1588 aa17,78■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Cspp1B2RX88 1205 aa17,78■□□□□ 0,44
Col7a1-202ENSMUST00000112070 1700123L14RikQ3V2K7 440 aa17,78■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Becn1O88597 448 aa17,78■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Dnai1Q8C0M8 701 aa17,78■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Zrsr2Q62377 462 aaKnown RBP17,77■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Setd5Q5XJV7 1441 aa17,77■□□□□ 0,44
Col7a1-202ENSMUST00000112070 Sart3Q9JLI8 962 aaKnown RBP17,76■□□□□ 0,43
Col7a1-202ENSMUST00000112070 Rgl3Q3UYI5 709 aa17,75■□□□□ 0,43
Col7a1-202ENSMUST00000112070 Glipr1l2Q9CQ35 332 aa17,75■□□□□ 0,43
Col7a1-202ENSMUST00000112070 Eea1Q8BL66 1411 aa17,74■□□□□ 0,43
Col7a1-202ENSMUST00000112070 Card11Q8CIS0 1159 aa17,74■□□□□ 0,43
Col7a1-202ENSMUST00000112070 Chic2Q9D9G3 165 aa17,74■□□□□ 0,43
Col7a1-202ENSMUST00000112070 Atp6v1dP57746 247 aa17,74■□□□□ 0,43
Col7a1-202ENSMUST00000112070 Tpm3P21107 285 aaKnown RBP17,73■□□□□ 0,43
Col7a1-202ENSMUST00000112070 Pcmtd1P59913 357 aa17,73■□□□□ 0,43
Col7a1-202ENSMUST00000112070 VgfQ0VGU4 617 aa17,72■□□□□ 0,43
Col7a1-202ENSMUST00000112070 Ccdc18Q640L5 1455 aa17,72■□□□□ 0,43
Col7a1-202ENSMUST00000112070 EspnQ9ET47 871 aa17,71■□□□□ 0,43
Col7a1-202ENSMUST00000112070 Fkbp15Q6P9Q6 1216 aaKnown RBP17,71■□□□□ 0,42
Col7a1-202ENSMUST00000112070 Ush1cQ9ES64 910 aa17,7■□□□□ 0,42
Col7a1-202ENSMUST00000112070 Trim30aP15533 496 aa17,7■□□□□ 0,42
Col7a1-202ENSMUST00000112070 Kiaa0754Q69ZZ9 979 aa17,7■□□□□ 0,42
Col7a1-202ENSMUST00000112070 CalrP14211 416 aaKnown RBP17,69■□□□□ 0,42
Col7a1-202ENSMUST00000112070 Mtus2Q3UHD3 1353 aa17,68■□□□□ 0,42
Col7a1-202ENSMUST00000112070 Rassf8Q8CJ96 419 aa17,68■□□□□ 0,42
Col7a1-202ENSMUST00000112070 Ipo9Q91YE6 1041 aa17,68■□□□□ 0,42
Retrieved 100 of 22,080 RNA–protein pairs in 10,7 ms