RNA–Protein interactions for RNA: ENSMUST00000112070.7

Col7a1-202, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col7a1, Length 9,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-202ENSMUST00000112070 Rhox8Q6VSS7 320 aa23,7■■□□□ 1,39
Col7a1-202ENSMUST00000112070 Rpgrip1Q9EPQ2 1331 aa23,49■■□□□ 1,35
Col7a1-202ENSMUST00000112070 Cngb1E1AZ71 1325 aa23,27■■□□□ 1,32
Col7a1-202ENSMUST00000112070 Las1lA2BE28 776 aaKnown RBP22,99■■□□□ 1,27
Col7a1-202ENSMUST00000112070 Pelp1Q9DBD5 1123 aaKnown RBP22,95■■□□□ 1,26
Col7a1-202ENSMUST00000112070 Wdr66E9Q743 1299 aa21,96■■□□□ 1,11
Col7a1-202ENSMUST00000112070 Rtl1Q7M732 1744 aa21,66■■□□□ 1,06
Col7a1-202ENSMUST00000112070 Amer1Q7TS75 1132 aa21,59■■□□□ 1,05
Col7a1-202ENSMUST00000112070 4930567H17RikQ3V0K5 233 aa21,52■■□□□ 1,04
Col7a1-202ENSMUST00000112070 CenpbP27790 599 aa21,48■■□□□ 1,03
Col7a1-202ENSMUST00000112070 Stra8P70278 393 aa21,44■■□□□ 1,02
Col7a1-202ENSMUST00000112070 Myt1Q8CFC2 1127 aa21,36■■□□□ 1,01
Col7a1-202ENSMUST00000112070 Ube2uB1AUC4 352 aa21,34■■□□□ 1,01
Col7a1-202ENSMUST00000112070 Ehmt2Q9Z148 1263 aaKnown RBP21,19■□□□□ 0,98
Col7a1-202ENSMUST00000112070 Zeb1Q64318 1117 aa21,14■□□□□ 0,98
Col7a1-202ENSMUST00000112070 Ccdc180J3QNE4 1664 aa21,11■□□□□ 0,97
Col7a1-202ENSMUST00000112070 Esf1Q3V1V3 845 aaKnown RBP21,02■□□□□ 0,96
Col7a1-202ENSMUST00000112070 NefmP08553 848 aa20,89■□□□□ 0,94
Col7a1-202ENSMUST00000112070 Trim41Q5NCC3 630 aa20,83■□□□□ 0,93
Col7a1-202ENSMUST00000112070 Npm2Q80W85 207 aa20,79■□□□□ 0,92
Col7a1-202ENSMUST00000112070 Acin1Q9JIX8 1338 aaKnown RBP20,64■□□□□ 0,89
Col7a1-202ENSMUST00000112070 Ccdc136Q3TVA9 1136 aa20,64■□□□□ 0,89
Col7a1-202ENSMUST00000112070 Tnnt3Q9QZ47 272 aa20,61■□□□□ 0,89
Col7a1-202ENSMUST00000112070 Rtl5Q5DTT4 599 aa20,6■□□□□ 0,89
Col7a1-202ENSMUST00000112070 NeflP08551 543 aa20,54■□□□□ 0,88
Col7a1-202ENSMUST00000112070 4933416C03RikQ3V063 378 aa20,53■□□□□ 0,88
Col7a1-202ENSMUST00000112070 Anp32bQ9EST5 272 aaKnown RBP20,51■□□□□ 0,87
Col7a1-202ENSMUST00000112070 Gab3Q8BSM5 595 aa20,4■□□□□ 0,86
Col7a1-202ENSMUST00000112070 Ttbk1Q6PCN3 1308 aa20,38■□□□□ 0,85
Col7a1-202ENSMUST00000112070 Myt1lP97500 1187 aa20,37■□□□□ 0,85
Col7a1-202ENSMUST00000112070 Cdk11bP24788 784 aaKnown RBP20,33■□□□□ 0,85
Col7a1-202ENSMUST00000112070 NrdcQ8BHG1 1161 aa20,28■□□□□ 0,84
Col7a1-202ENSMUST00000112070 Slc24a1Q91WD8 1130 aa20,24■□□□□ 0,83
Col7a1-202ENSMUST00000112070 NischQ80TM9 1593 aa20,22■□□□□ 0,83
Col7a1-202ENSMUST00000112070 UbtfP25976 765 aaKnown RBP20,08■□□□□ 0,8
Col7a1-202ENSMUST00000112070 HrcG5E8J6 738 aa20,06■□□□□ 0,8
Col7a1-202ENSMUST00000112070 Nop58Q6DFW4 536 aaKnown RBP19,92■□□□□ 0,78
Col7a1-202ENSMUST00000112070 NclP09405 707 aaKnown RBP19,84■□□□□ 0,77
Col7a1-202ENSMUST00000112070 DiexfQ8BTT6 772 aaKnown RBP19,78■□□□□ 0,76
Col7a1-202ENSMUST00000112070 Pcgf6Q99NA9 353 aa19,74■□□□□ 0,75
Col7a1-202ENSMUST00000112070 Neurod1Q60867 357 aa19,71■□□□□ 0,75
Col7a1-202ENSMUST00000112070 Ythdc1E9Q5K9 736 aaKnown RBP19,69■□□□□ 0,74
Col7a1-202ENSMUST00000112070 Os9Q8K2C7 672 aa19,67■□□□□ 0,74
Col7a1-202ENSMUST00000112070 Eif5bQ05D44 1216 aaKnown RBP19,65■□□□□ 0,74
Col7a1-202ENSMUST00000112070 Anp32aO35381 247 aa19,61■□□□□ 0,73
Col7a1-202ENSMUST00000112070 TonslQ6NZL6 1363 aa19,59■□□□□ 0,73
Col7a1-202ENSMUST00000112070 Fam50aQ9WV03 339 aaKnown RBP19,56■□□□□ 0,72
Col7a1-202ENSMUST00000112070 DaxxO35613 739 aa19,53■□□□□ 0,72
Col7a1-202ENSMUST00000112070 Ccdc9Q8VC31 543 aaKnown RBP19,47■□□□□ 0,71
Col7a1-202ENSMUST00000112070 Hdac5Q9Z2V6 1113 aa19,44■□□□□ 0,7
Col7a1-202ENSMUST00000112070 CatipB9EKE5 520 aa19,4■□□□□ 0,7
Col7a1-202ENSMUST00000112070 ClspnQ80YR7 1315 aa19,31■□□□□ 0,68
Col7a1-202ENSMUST00000112070 Upf2A2AT37 1269 aaKnown RBP19,25■□□□□ 0,67
Col7a1-202ENSMUST00000112070 Il27Q8K3I6 234 aa19,16■□□□□ 0,66
Col7a1-202ENSMUST00000112070 Nlrp6Q91WS2 869 aa19,14■□□□□ 0,65
Col7a1-202ENSMUST00000112070 Hsp90aa1P07901 733 aaKnown RBP19,12■□□□□ 0,65
Col7a1-202ENSMUST00000112070 Supt5hO55201 1082 aaKnown RBP19,12■□□□□ 0,65
Col7a1-202ENSMUST00000112070 Zcchc6Q5BLK4 1491 aaKnown RBP19,04■□□□□ 0,64
Col7a1-202ENSMUST00000112070 Ap3b1Q9Z1T1 1105 aa19,02■□□□□ 0,64
Col7a1-202ENSMUST00000112070 Aplp2Q06335 707 aa18,94■□□□□ 0,62
Col7a1-202ENSMUST00000112070 Trim44Q9QXA7 346 aa18,93■□□□□ 0,62
Col7a1-202ENSMUST00000112070 Gm13697A2AK42 830 aa18,9■□□□□ 0,62
Col7a1-202ENSMUST00000112070 Mier1Q5UAK0 511 aa18,89■□□□□ 0,61
Col7a1-202ENSMUST00000112070 Adam1bQ8R534 806 aa18,88■□□□□ 0,61
Col7a1-202ENSMUST00000112070 Anks4bQ8K3X6 423 aa18,87■□□□□ 0,61
Col7a1-202ENSMUST00000112070 Ccer2J3QPU5 274 aa18,85■□□□□ 0,61
Col7a1-202ENSMUST00000112070 Polr3glQ8R0C0 218 aa18,81■□□□□ 0,6
Col7a1-202ENSMUST00000112070 Hnrnpul2Q00PI9 745 aaKnown RBP18,77■□□□□ 0,6
Col7a1-202ENSMUST00000112070 Lmod3E9QA62 571 aa18,76■□□□□ 0,59
Col7a1-202ENSMUST00000112070 Calr4Q3TQS0 420 aa18,73■□□□□ 0,59
Col7a1-202ENSMUST00000112070 Ppargc1bQ8VHJ7 1014 aa18,72■□□□□ 0,59
Col7a1-202ENSMUST00000112070 DekQ7TNV0 380 aaKnown RBP18,71■□□□□ 0,59
Col7a1-202ENSMUST00000112070 Htatsf1Q8BGC0 757 aa18,68■□□□□ 0,58
Col7a1-202ENSMUST00000112070 Atp1b4Q99ME6 356 aa18,66■□□□□ 0,58
Col7a1-202ENSMUST00000112070 Dcaf1Q80TR8 1506 aa18,66■□□□□ 0,58
Col7a1-202ENSMUST00000112070 ArxO35085 564 aa18,66■□□□□ 0,58
Col7a1-202ENSMUST00000112070 Wdr43Q6ZQL4 677 aaKnown RBP18,65■□□□□ 0,58
Col7a1-202ENSMUST00000112070 Gm13695A2AK44 830 aa18,64■□□□□ 0,57
Col7a1-202ENSMUST00000112070 Ppp4r2Q0VGB7 417 aa18,61■□□□□ 0,57
Col7a1-202ENSMUST00000112070 Erich6D3Z6S9 713 aa18,59■□□□□ 0,57
Col7a1-202ENSMUST00000112070 Npm1Q61937 292 aaKnown RBP18,58■□□□□ 0,56
Col7a1-202ENSMUST00000112070 Chic1Q8CBW7 227 aa18,56■□□□□ 0,56
Col7a1-202ENSMUST00000112070 Znf326O88291 580 aa18,54■□□□□ 0,56
Col7a1-202ENSMUST00000112070 PtmaP26350 111 aa18,52■□□□□ 0,56
Col7a1-202ENSMUST00000112070 Zbtb7cQ8VCZ7 619 aa18,51■□□□□ 0,55
Col7a1-202ENSMUST00000112070 Abcc9P70170 1546 aa18,51■□□□□ 0,55
Col7a1-202ENSMUST00000112070 Ccdc27Q3V036 639 aa18,49■□□□□ 0,55
Col7a1-202ENSMUST00000112070 Hsp90ab1P11499 724 aaKnown RBP18,48■□□□□ 0,55
Col7a1-202ENSMUST00000112070 Fgd1P52734 960 aa18,48■□□□□ 0,55
Col7a1-202ENSMUST00000112070 Brd4Q9ESU6 1400 aaKnown RBP18,47■□□□□ 0,55
Col7a1-202ENSMUST00000112070 Calcoco2A2A6M5 331 aa18,47■□□□□ 0,55
Col7a1-202ENSMUST00000112070 Tnnt2P50752 301 aa18,47■□□□□ 0,55
Col7a1-202ENSMUST00000112070 Csrnp3P59055 597 aa18,46■□□□□ 0,55
Col7a1-202ENSMUST00000112070 Chmp4bQ9D8B3 224 aaKnown RBP18,46■□□□□ 0,55
Col7a1-202ENSMUST00000112070 Plekhg3Q4VAC9 1341 aa18,46■□□□□ 0,55
Col7a1-202ENSMUST00000112070 Clstn2Q9ER65 966 aa18,43■□□□□ 0,54
Col7a1-202ENSMUST00000112070 PnnO35691 725 aaKnown RBP18,41■□□□□ 0,54
Col7a1-202ENSMUST00000112070 Cep164Q5DU05 1446 aa18,41■□□□□ 0,54
Col7a1-202ENSMUST00000112070 CanxP35564 591 aaKnown RBP18,41■□□□□ 0,54
Col7a1-202ENSMUST00000112070 Lmod2Q3UHZ5 550 aa18,41■□□□□ 0,54
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms