RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Kif15Q6P9L6 1387 aa20.25■□□□□ 0.83
Ccdc50-203ENSMUST00000100026 Kdm2aP59997 1161 aa20.25■□□□□ 0.83
Ccdc50-203ENSMUST00000100026 Ercc6F8VPZ5 1481 aa20.25■□□□□ 0.83
Ccdc50-203ENSMUST00000100026 Znf326O88291 580 aa20.24■□□□□ 0.83
Ccdc50-203ENSMUST00000100026 Upf2A2AT37 1269 aaKnown RBP20.19■□□□□ 0.82
Ccdc50-203ENSMUST00000100026 Srpk2O54781 681 aaKnown RBP20.19■□□□□ 0.82
Ccdc50-203ENSMUST00000100026 Ppp1r18Q8BQ30 594 aa20.18■□□□□ 0.82
Ccdc50-203ENSMUST00000100026 Setd5Q5XJV7 1441 aa20.17■□□□□ 0.82
Ccdc50-203ENSMUST00000100026 Rtn4Q99P72 1162 aaKnown RBP20.17■□□□□ 0.82
Ccdc50-203ENSMUST00000100026 Exosc9Q9JHI7 438 aaKnown RBP20.16■□□□□ 0.82
Ccdc50-203ENSMUST00000100026 Cep164Q5DU05 1446 aa20.16■□□□□ 0.82
Ccdc50-203ENSMUST00000100026 Rsf1E9PWW9 1441 aaKnown RBP20.15■□□□□ 0.82
Ccdc50-203ENSMUST00000100026 Ythdc1E9Q5K9 736 aaKnown RBP20.13■□□□□ 0.81
Ccdc50-203ENSMUST00000100026 Mrs2Q5NCE8 434 aa20.13■□□□□ 0.81
Ccdc50-203ENSMUST00000100026 Gm20521D3Z5F7 333 aa20.1■□□□□ 0.81
Ccdc50-203ENSMUST00000100026 Mroh3A0A1D5RM54 893 aa20.1■□□□□ 0.81
Ccdc50-203ENSMUST00000100026 Stk24Q99KH8 431 aa20.09■□□□□ 0.81
Ccdc50-203ENSMUST00000100026 Rrp7aQ9D1C9 280 aaKnown RBP20.09■□□□□ 0.81
Ccdc50-203ENSMUST00000100026 CatipB9EKE5 520 aa20.08■□□□□ 0.8
Ccdc50-203ENSMUST00000100026 Grwd1Q810D6 446 aaKnown RBP20.08■□□□□ 0.8
Ccdc50-203ENSMUST00000100026 Ccdc18Q640L5 1455 aa20.07■□□□□ 0.8
Ccdc50-203ENSMUST00000100026 Gm38655A0A286YDK6 273 aa20.07■□□□□ 0.8
Ccdc50-203ENSMUST00000100026 Vsig10D3YX43 558 aa20.06■□□□□ 0.8
Ccdc50-203ENSMUST00000100026 Ggt6Q6PDE7 497 aa20.05■□□□□ 0.8
Ccdc50-203ENSMUST00000100026 Aplp2Q06335 707 aa20.04■□□□□ 0.8
Ccdc50-203ENSMUST00000100026 Ppp4r2Q0VGB7 417 aa20.04■□□□□ 0.8
Ccdc50-203ENSMUST00000100026 DekQ7TNV0 380 aaKnown RBP20.04■□□□□ 0.8
Ccdc50-203ENSMUST00000100026 Dcaf1Q80TR8 1506 aa20.03■□□□□ 0.8
Ccdc50-203ENSMUST00000100026 Stag3O70576 1240 aa20.01■□□□□ 0.79
Ccdc50-203ENSMUST00000100026 Calr4Q3TQS0 420 aa19.99■□□□□ 0.79
Ccdc50-203ENSMUST00000100026 Clstn1Q9EPL2 979 aa19.99■□□□□ 0.79
Ccdc50-203ENSMUST00000100026 NacadQ5SWP3 1504 aa19.99■□□□□ 0.79
Ccdc50-203ENSMUST00000100026 Sall2Q9QX96 1004 aa19.96■□□□□ 0.79
Ccdc50-203ENSMUST00000100026 Mapk8ip3Q9ESN9 1337 aa19.93■□□□□ 0.78
Ccdc50-203ENSMUST00000100026 MlecQ6ZQI3 291 aaKnown RBP19.92■□□□□ 0.78
Ccdc50-203ENSMUST00000100026 Card11Q8CIS0 1159 aa19.9■□□□□ 0.78
Ccdc50-203ENSMUST00000100026 Mtus2Q3UHD3 1353 aa19.88■□□□□ 0.77
Ccdc50-203ENSMUST00000100026 1700019A02RikA0A087WPV9 146 aa19.88■□□□□ 0.77
Ccdc50-203ENSMUST00000100026 Neurod2Q62414 383 aa19.86■□□□□ 0.77
Ccdc50-203ENSMUST00000100026 Gm6268A2A3U9 297 aa19.85■□□□□ 0.77
Ccdc50-203ENSMUST00000100026 Arid3cA6PWV5 409 aa19.85■□□□□ 0.77
Ccdc50-203ENSMUST00000100026 Cnga1P29974 684 aa19.84■□□□□ 0.77
Ccdc50-203ENSMUST00000100026 Iqcf3Q9D498 203 aa19.84■□□□□ 0.77
Ccdc50-203ENSMUST00000100026 Apbb1Q9QXJ1 710 aa19.84■□□□□ 0.77
Ccdc50-203ENSMUST00000100026 Arid4bA2CG63 1314 aaKnown RBP19.83■□□□□ 0.77
Ccdc50-203ENSMUST00000100026 Q8BT18 775 aa19.82■□□□□ 0.76
Ccdc50-203ENSMUST00000100026 Hsp90ab1P11499 724 aaKnown RBP19.79■□□□□ 0.76
Ccdc50-203ENSMUST00000100026 Trim30dE9PWL0 497 aa19.79■□□□□ 0.76
Ccdc50-203ENSMUST00000100026 AknaQ80VW7 1404 aa19.78■□□□□ 0.76
Ccdc50-203ENSMUST00000100026 Eea1Q8BL66 1411 aa19.77■□□□□ 0.76
Ccdc50-203ENSMUST00000100026 Wdr43Q6ZQL4 677 aaKnown RBP19.77■□□□□ 0.76
Ccdc50-203ENSMUST00000100026 Lmod3E9QA62 571 aa19.75■□□□□ 0.75
Ccdc50-203ENSMUST00000100026 Zfp777B9EKF4 885 aa19.74■□□□□ 0.75
Ccdc50-203ENSMUST00000100026 Ofd1Q80Z25 1017 aa19.74■□□□□ 0.75
Ccdc50-203ENSMUST00000100026 Pes1Q9EQ61 584 aaKnown RBP19.73■□□□□ 0.75
Ccdc50-203ENSMUST00000100026 Golga3P55937 1487 aa19.72■□□□□ 0.75
Ccdc50-203ENSMUST00000100026 Stk26Q99JT2 416 aa19.7■□□□□ 0.74
Ccdc50-203ENSMUST00000100026 Psme1P97371 249 aa19.69■□□□□ 0.74
Ccdc50-203ENSMUST00000100026 PnnO35691 725 aaKnown RBP19.68■□□□□ 0.74
Ccdc50-203ENSMUST00000100026 Eif4g2Q62448 906 aaKnown RBP19.68■□□□□ 0.74
Ccdc50-203ENSMUST00000100026 Cwc22Q8C5N3 908 aaKnown RBP19.66■□□□□ 0.74
Ccdc50-203ENSMUST00000100026 NudcO35685 332 aaKnown RBP19.65■□□□□ 0.74
Ccdc50-203ENSMUST00000100026 Plin1Q8CGN5 517 aa19.65■□□□□ 0.74
Ccdc50-203ENSMUST00000100026 Sox12Q04890 314 aa19.64■□□□□ 0.74
Ccdc50-203ENSMUST00000100026 Ecm2Q5FW85 670 aa19.63■□□□□ 0.73
Ccdc50-203ENSMUST00000100026 Armcx1Q9CX83 456 aa19.62■□□□□ 0.73
Ccdc50-203ENSMUST00000100026 Rtf1A2AQ19 715 aaKnown RBP19.62■□□□□ 0.73
Ccdc50-203ENSMUST00000100026 PtmaP26350 111 aa19.62■□□□□ 0.73
Ccdc50-203ENSMUST00000100026 CanxP35564 591 aaKnown RBP19.62■□□□□ 0.73
Ccdc50-203ENSMUST00000100026 Txndc2Q6P902 515 aa19.61■□□□□ 0.73
Ccdc50-203ENSMUST00000100026 Baz1aO88379 1555 aa19.61■□□□□ 0.73
Ccdc50-203ENSMUST00000100026 Sh3bp5Q9Z131 463 aa19.6■□□□□ 0.73
Ccdc50-203ENSMUST00000100026 Anks4bQ8K3X6 423 aa19.59■□□□□ 0.73
Ccdc50-203ENSMUST00000100026 Chmp4bQ9D8B3 224 aaKnown RBP19.59■□□□□ 0.73
Ccdc50-203ENSMUST00000100026 Trim44Q9QXA7 346 aa19.58■□□□□ 0.73
Ccdc50-203ENSMUST00000100026 Lemd3Q9WU40 921 aa19.58■□□□□ 0.72
Ccdc50-203ENSMUST00000100026 Hsp90b1P08113 802 aaKnown RBP19.57■□□□□ 0.72
Ccdc50-203ENSMUST00000100026 Map4P27546 1125 aaKnown RBP19.56■□□□□ 0.72
Ccdc50-203ENSMUST00000100026 Kif27Q7M6Z4 1394 aa19.56■□□□□ 0.72
Ccdc50-203ENSMUST00000100026 HdgfP51859 237 aaKnown RBP19.56■□□□□ 0.72
Ccdc50-203ENSMUST00000100026 Ubap1lG3UW59 384 aa19.55■□□□□ 0.72
Ccdc50-203ENSMUST00000100026 U2surpQ6NV83 1029 aaKnown RBP19.55■□□□□ 0.72
Ccdc50-203ENSMUST00000100026 Ppm1fQ8CGA0 452 aa19.54■□□□□ 0.72
Ccdc50-203ENSMUST00000100026 Plcb2A3KGF7 1181 aa19.52■□□□□ 0.72
Ccdc50-203ENSMUST00000100026 Rpap1Q80TE0 1409 aa19.52■□□□□ 0.71
Ccdc50-203ENSMUST00000100026 Tnnt1O88346 262 aa19.5■□□□□ 0.71
Ccdc50-203ENSMUST00000100026 Nol10Q5RJG1 687 aaKnown RBP19.5■□□□□ 0.71
Ccdc50-203ENSMUST00000100026 Pds5bQ4VA53 1446 aaKnown RBP19.49■□□□□ 0.71
Ccdc50-203ENSMUST00000100026 Znf316Q6PGE4 1016 aa19.49■□□□□ 0.71
Ccdc50-203ENSMUST00000100026 Map7O88735 730 aa19.48■□□□□ 0.71
Ccdc50-203ENSMUST00000100026 Gtf2e1Q9D0D5 440 aa19.48■□□□□ 0.71
Ccdc50-203ENSMUST00000100026 Dbr1Q923B1 550 aa19.48■□□□□ 0.71
Ccdc50-203ENSMUST00000100026 Ifit1bl1D3Z6F0 470 aa19.48■□□□□ 0.71
Ccdc50-203ENSMUST00000100026 Birc3O08863 600 aa19.47■□□□□ 0.71
Ccdc50-203ENSMUST00000100026 Rassf8Q8CJ96 419 aa19.47■□□□□ 0.71
Ccdc50-203ENSMUST00000100026 Mia2Q91ZV0 1396 aa19.46■□□□□ 0.71
Ccdc50-203ENSMUST00000100026 Anapc15P60007 132 aa19.41■□□□□ 0.7
Ccdc50-203ENSMUST00000100026 Fhad1A6PWD2 1420 aa19.41■□□□□ 0.7
Ccdc50-203ENSMUST00000100026 Q3TQI7 289 aaKnown RBP19.41■□□□□ 0.7
Ccdc50-203ENSMUST00000100026 Rundc1Q0VDN7 615 aa19.38■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms