RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 CanxP35564 591 aaKnown RBP20.11■□□□□ 0.81
Chd3-201ENSMUST00000092971 P3h3Q8CG70 732 aa20.11■□□□□ 0.81
Chd3-201ENSMUST00000092971 Trim30dE9PWL0 497 aa20.1■□□□□ 0.81
Chd3-201ENSMUST00000092971 Hsp90ab1P11499 724 aaKnown RBP20.09■□□□□ 0.81
Chd3-201ENSMUST00000092971 PtmaP26350 111 aa20.07■□□□□ 0.8
Chd3-201ENSMUST00000092971 Apbb1Q9QXJ1 710 aa20.05■□□□□ 0.8
Chd3-201ENSMUST00000092971 Clstn1Q9EPL2 979 aa20.01■□□□□ 0.79
Chd3-201ENSMUST00000092971 Rtn4Q99P72 1162 aaKnown RBP20.01■□□□□ 0.79
Chd3-201ENSMUST00000092971 Znf326O88291 580 aa19.99■□□□□ 0.79
Chd3-201ENSMUST00000092971 Clip1Q922J3 1391 aa19.99■□□□□ 0.79
Chd3-201ENSMUST00000092971 Plcb2A3KGF7 1181 aa19.98■□□□□ 0.79
Chd3-201ENSMUST00000092971 Spryd3E9Q9B3 442 aa19.98■□□□□ 0.79
Chd3-201ENSMUST00000092971 Fam71e1A1L3C1 212 aa19.97■□□□□ 0.79
Chd3-201ENSMUST00000092971 Safb2Q80YR5 991 aaKnown RBP19.94■□□□□ 0.78
Chd3-201ENSMUST00000092971 Hdac5Q9Z2V6 1113 aa19.9■□□□□ 0.78
Chd3-201ENSMUST00000092971 Armcx1Q9CX83 456 aa19.88■□□□□ 0.77
Chd3-201ENSMUST00000092971 Znf316Q6PGE4 1016 aa19.88■□□□□ 0.77
Chd3-201ENSMUST00000092971 Dbr1Q923B1 550 aa19.88■□□□□ 0.77
Chd3-201ENSMUST00000092971 Neurod2Q62414 383 aa19.84■□□□□ 0.77
Chd3-201ENSMUST00000092971 Rgl3Q3UYI5 709 aa19.83■□□□□ 0.76
Chd3-201ENSMUST00000092971 1700123L14RikQ3V2K7 440 aa19.82■□□□□ 0.76
Chd3-201ENSMUST00000092971 Ofd1Q80Z25 1017 aa19.77■□□□□ 0.76
Chd3-201ENSMUST00000092971 Kdm2aP59997 1161 aa19.76■□□□□ 0.75
Chd3-201ENSMUST00000092971 Ecm2Q5FW85 670 aa19.74■□□□□ 0.75
Chd3-201ENSMUST00000092971 NgefQ8CHT1 710 aa19.72■□□□□ 0.75
Chd3-201ENSMUST00000092971 1700019A02RikA0A087WPV9 146 aa19.72■□□□□ 0.75
Chd3-201ENSMUST00000092971 PnnO35691 725 aaKnown RBP19.71■□□□□ 0.75
Chd3-201ENSMUST00000092971 Gm6268A2A3U9 297 aa19.71■□□□□ 0.75
Chd3-201ENSMUST00000092971 B4galnt3Q6L8S8 986 aa19.71■□□□□ 0.75
Chd3-201ENSMUST00000092971 Grwd1Q810D6 446 aaKnown RBP19.71■□□□□ 0.75
Chd3-201ENSMUST00000092971 Aebp2Q9Z248 504 aaKnown RBP19.7■□□□□ 0.74
Chd3-201ENSMUST00000092971 Ccer2J3QPU5 274 aa19.68■□□□□ 0.74
Chd3-201ENSMUST00000092971 Ccdc9Q8VC31 543 aaKnown RBP19.67■□□□□ 0.74
Chd3-201ENSMUST00000092971 Pes1Q9EQ61 584 aaKnown RBP19.65■□□□□ 0.74
Chd3-201ENSMUST00000092971 Slc4a3P16283 1227 aa19.64■□□□□ 0.74
Chd3-201ENSMUST00000092971 BlmO88700 1416 aa19.63■□□□□ 0.73
Chd3-201ENSMUST00000092971 Casc1Q6TDU8 730 aa19.6■□□□□ 0.73
Chd3-201ENSMUST00000092971 Htatsf1Q8BGC0 757 aa19.59■□□□□ 0.73
Chd3-201ENSMUST00000092971 SafbD3YXK2 937 aaKnown RBP19.58■□□□□ 0.73
Chd3-201ENSMUST00000092971 Ccdc27Q3V036 639 aa19.58■□□□□ 0.72
Chd3-201ENSMUST00000092971 Dcaf1Q80TR8 1506 aa19.57■□□□□ 0.72
Chd3-201ENSMUST00000092971 Erich6bQ9D4S6 220 aa19.55■□□□□ 0.72
Chd3-201ENSMUST00000092971 Exosc9Q9JHI7 438 aaKnown RBP19.55■□□□□ 0.72
Chd3-201ENSMUST00000092971 Hsp90b1P08113 802 aaKnown RBP19.54■□□□□ 0.72
Chd3-201ENSMUST00000092971 Clstn2Q9ER65 966 aa19.52■□□□□ 0.72
Chd3-201ENSMUST00000092971 Mapk8ip3Q9ESN9 1337 aa19.51■□□□□ 0.71
Chd3-201ENSMUST00000092971 Cnga1P29974 684 aa19.51■□□□□ 0.71
Chd3-201ENSMUST00000092971 Sh3bp5Q9Z131 463 aa19.5■□□□□ 0.71
Chd3-201ENSMUST00000092971 Ubl4bQ9CQ84 188 aa19.5■□□□□ 0.71
Chd3-201ENSMUST00000092971 Pcmtd1P59913 357 aa19.5■□□□□ 0.71
Chd3-201ENSMUST00000092971 IqubQ8CDK3 788 aa19.5■□□□□ 0.71
Chd3-201ENSMUST00000092971 Cep164Q5DU05 1446 aa19.48■□□□□ 0.71
Chd3-201ENSMUST00000092971 Bcl11aQ9QYE3 773 aa19.48■□□□□ 0.71
Chd3-201ENSMUST00000092971 Srpk2O54781 681 aaKnown RBP19.47■□□□□ 0.71
Chd3-201ENSMUST00000092971 Anapc15P60007 132 aa19.46■□□□□ 0.71
Chd3-201ENSMUST00000092971 Tnnt2P50752 301 aa19.46■□□□□ 0.71
Chd3-201ENSMUST00000092971 Dnttip2Q8R2M2 758 aaKnown RBP19.46■□□□□ 0.71
Chd3-201ENSMUST00000092971 Gm20521D3Z5F7 333 aa19.45■□□□□ 0.7
Chd3-201ENSMUST00000092971 Ppm1gQ61074 542 aa19.45■□□□□ 0.7
Chd3-201ENSMUST00000092971 Plin1Q8CGN5 517 aa19.44■□□□□ 0.7
Chd3-201ENSMUST00000092971 Taok2Q6ZQ29 1240 aa19.43■□□□□ 0.7
Chd3-201ENSMUST00000092971 Card11Q8CIS0 1159 aa19.43■□□□□ 0.7
Chd3-201ENSMUST00000092971 Mroh3A0A1D5RM54 893 aa19.42■□□□□ 0.7
Chd3-201ENSMUST00000092971 Mak16Q8BGS0 296 aaKnown RBP19.41■□□□□ 0.7
Chd3-201ENSMUST00000092971 MyclP10166 368 aa19.4■□□□□ 0.7
Chd3-201ENSMUST00000092971 Rassf8Q8CJ96 419 aa19.4■□□□□ 0.7
Chd3-201ENSMUST00000092971 Stk24Q99KH8 431 aa19.4■□□□□ 0.7
Chd3-201ENSMUST00000092971 Irx3P81067 507 aa19.38■□□□□ 0.69
Chd3-201ENSMUST00000092971 Senp3Q9EP97 568 aaKnown RBP19.38■□□□□ 0.69
Chd3-201ENSMUST00000092971 Map7O88735 730 aa19.36■□□□□ 0.69
Chd3-201ENSMUST00000092971 Adam1bQ8R534 806 aa19.35■□□□□ 0.69
Chd3-201ENSMUST00000092971 Stag3O70576 1240 aa19.35■□□□□ 0.69
Chd3-201ENSMUST00000092971 Mical1Q8VDP3 1048 aa19.34■□□□□ 0.69
Chd3-201ENSMUST00000092971 CgnP59242 1191 aa19.3■□□□□ 0.68
Chd3-201ENSMUST00000092971 U2surpQ6NV83 1029 aaKnown RBP19.3■□□□□ 0.68
Chd3-201ENSMUST00000092971 Wwc2Q6NXJ0 1187 aa19.3■□□□□ 0.68
Chd3-201ENSMUST00000092971 Brd4Q9ESU6 1400 aaKnown RBP19.29■□□□□ 0.68
Chd3-201ENSMUST00000092971 Q8BT18 775 aa19.27■□□□□ 0.68
Chd3-201ENSMUST00000092971 Gpatch11Q3UFS4 262 aa19.27■□□□□ 0.68
Chd3-201ENSMUST00000092971 Prm3Q62100 101 aa19.26■□□□□ 0.67
Chd3-201ENSMUST00000092971 Setd5Q5XJV7 1441 aa19.26■□□□□ 0.67
Chd3-201ENSMUST00000092971 MsnP26041 577 aaKnown RBP19.25■□□□□ 0.67
Chd3-201ENSMUST00000092971 Tnnt1O88346 262 aa19.25■□□□□ 0.67
Chd3-201ENSMUST00000092971 AU015836B2RUM3 263 aa19.24■□□□□ 0.67
Chd3-201ENSMUST00000092971 Rrp7aQ9D1C9 280 aaKnown RBP19.24■□□□□ 0.67
Chd3-201ENSMUST00000092971 MccE9PWI3 1003 aa19.23■□□□□ 0.67
Chd3-201ENSMUST00000092971 CrebrfQ8CDG5 640 aaKnown RBP19.23■□□□□ 0.67
Chd3-201ENSMUST00000092971 Supt16hQ920B9 1047 aa19.22■□□□□ 0.67
Chd3-201ENSMUST00000092971 Cluap1Q8R3P7 413 aa19.22■□□□□ 0.67
Chd3-201ENSMUST00000092971 Znf330Q922H9 316 aa19.21■□□□□ 0.67
Chd3-201ENSMUST00000092971 KnstrnQ9D9Z1 312 aaKnown RBP19.2■□□□□ 0.66
Chd3-201ENSMUST00000092971 Isy1Q69ZQ2 285 aaKnown RBP19.2■□□□□ 0.66
Chd3-201ENSMUST00000092971 Iqcf3Q9D498 203 aa19.2■□□□□ 0.66
Chd3-201ENSMUST00000092971 NudcO35685 332 aaKnown RBP19.2■□□□□ 0.66
Chd3-201ENSMUST00000092971 Tmco5bQ80X59 307 aa19.18■□□□□ 0.66
Chd3-201ENSMUST00000092971 Iffo2Q8R2V2 512 aa19.18■□□□□ 0.66
Chd3-201ENSMUST00000092971 Ubap1lG3UW59 384 aa19.17■□□□□ 0.66
Chd3-201ENSMUST00000092971 Kiaa0754Q69ZZ9 979 aa19.17■□□□□ 0.66
Chd3-201ENSMUST00000092971 Rwdd1Q9CQK7 243 aa19.16■□□□□ 0.66
Chd3-201ENSMUST00000092971 Arhgap27A2AB59 869 aa19.16■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms