RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Aplp2Q06335 707 aa16.81■□□□□ 0.28
Ccdc88c-201ENSMUST00000068411 Fgd1P52734 960 aa16.79■□□□□ 0.28
Ccdc88c-201ENSMUST00000068411 Hdac5Q9Z2V6 1113 aa16.78■□□□□ 0.28
Ccdc88c-201ENSMUST00000068411 Trim30dE9PWL0 497 aa16.7■□□□□ 0.26
Ccdc88c-201ENSMUST00000068411 Ubl4bQ9CQ84 188 aa16.7■□□□□ 0.26
Ccdc88c-201ENSMUST00000068411 BlmO88700 1416 aa16.7■□□□□ 0.26
Ccdc88c-201ENSMUST00000068411 Apbb1Q9QXJ1 710 aa16.7■□□□□ 0.26
Ccdc88c-201ENSMUST00000068411 Rgl3Q3UYI5 709 aa16.7■□□□□ 0.26
Ccdc88c-201ENSMUST00000068411 Rtn4Q99P72 1162 aaKnown RBP16.69■□□□□ 0.26
Ccdc88c-201ENSMUST00000068411 CanxP35564 591 aaKnown RBP16.68■□□□□ 0.26
Ccdc88c-201ENSMUST00000068411 Ccer2J3QPU5 274 aa16.68■□□□□ 0.26
Ccdc88c-201ENSMUST00000068411 Hsp90ab1P11499 724 aaKnown RBP16.68■□□□□ 0.26
Ccdc88c-201ENSMUST00000068411 Clstn1Q9EPL2 979 aa16.65■□□□□ 0.26
Ccdc88c-201ENSMUST00000068411 Trim44Q9QXA7 346 aa16.64■□□□□ 0.25
Ccdc88c-201ENSMUST00000068411 Fam71e1A1L3C1 212 aa16.63■□□□□ 0.25
Ccdc88c-201ENSMUST00000068411 Aebp2Q9Z248 504 aaKnown RBP16.62■□□□□ 0.25
Ccdc88c-201ENSMUST00000068411 Kdm2aP59997 1161 aa16.6■□□□□ 0.25
Ccdc88c-201ENSMUST00000068411 Brd4Q9ESU6 1400 aaKnown RBP16.59■□□□□ 0.25
Ccdc88c-201ENSMUST00000068411 Grwd1Q810D6 446 aaKnown RBP16.59■□□□□ 0.25
Ccdc88c-201ENSMUST00000068411 Cep164Q5DU05 1446 aa16.59■□□□□ 0.25
Ccdc88c-201ENSMUST00000068411 Neurod2Q62414 383 aa16.57■□□□□ 0.24
Ccdc88c-201ENSMUST00000068411 Znf326O88291 580 aa16.56■□□□□ 0.24
Ccdc88c-201ENSMUST00000068411 Ofd1Q80Z25 1017 aa16.56■□□□□ 0.24
Ccdc88c-201ENSMUST00000068411 PtmaP26350 111 aa16.56■□□□□ 0.24
Ccdc88c-201ENSMUST00000068411 Dcaf1Q80TR8 1506 aa16.56■□□□□ 0.24
Ccdc88c-201ENSMUST00000068411 Dbr1Q923B1 550 aa16.54■□□□□ 0.24
Ccdc88c-201ENSMUST00000068411 Armcx1Q9CX83 456 aa16.54■□□□□ 0.24
Ccdc88c-201ENSMUST00000068411 MyclP10166 368 aa16.53■□□□□ 0.24
Ccdc88c-201ENSMUST00000068411 Plcb2A3KGF7 1181 aa16.53■□□□□ 0.24
Ccdc88c-201ENSMUST00000068411 1700123L14RikQ3V2K7 440 aa16.51■□□□□ 0.23
Ccdc88c-201ENSMUST00000068411 Spryd3E9Q9B3 442 aa16.51■□□□□ 0.23
Ccdc88c-201ENSMUST00000068411 NgefQ8CHT1 710 aa16.51■□□□□ 0.23
Ccdc88c-201ENSMUST00000068411 Clstn2Q9ER65 966 aa16.5■□□□□ 0.23
Ccdc88c-201ENSMUST00000068411 Ecm2Q5FW85 670 aa16.45■□□□□ 0.22
Ccdc88c-201ENSMUST00000068411 Setd5Q5XJV7 1441 aa16.45■□□□□ 0.22
Ccdc88c-201ENSMUST00000068411 Gm6268A2A3U9 297 aa16.43■□□□□ 0.22
Ccdc88c-201ENSMUST00000068411 1700019A02RikA0A087WPV9 146 aa16.43■□□□□ 0.22
Ccdc88c-201ENSMUST00000068411 B4galnt3Q6L8S8 986 aa16.42■□□□□ 0.22
Ccdc88c-201ENSMUST00000068411 Exosc9Q9JHI7 438 aaKnown RBP16.41■□□□□ 0.22
Ccdc88c-201ENSMUST00000068411 Slc4a3P16283 1227 aa16.39■□□□□ 0.21
Ccdc88c-201ENSMUST00000068411 IqubQ8CDK3 788 aa16.39■□□□□ 0.21
Ccdc88c-201ENSMUST00000068411 SafbD3YXK2 937 aaKnown RBP16.38■□□□□ 0.21
Ccdc88c-201ENSMUST00000068411 Card11Q8CIS0 1159 aa16.38■□□□□ 0.21
Ccdc88c-201ENSMUST00000068411 Srpk2O54781 681 aaKnown RBP16.38■□□□□ 0.21
Ccdc88c-201ENSMUST00000068411 Mroh3A0A1D5RM54 893 aa16.38■□□□□ 0.21
Ccdc88c-201ENSMUST00000068411 Gm20521D3Z5F7 333 aa16.37■□□□□ 0.21
Ccdc88c-201ENSMUST00000068411 Cnga1P29974 684 aa16.36■□□□□ 0.21
Ccdc88c-201ENSMUST00000068411 Abcc8B2RUS7 1588 aa16.34■□□□□ 0.21
Ccdc88c-201ENSMUST00000068411 Stk24Q99KH8 431 aa16.34■□□□□ 0.21
Ccdc88c-201ENSMUST00000068411 Mapk8ip3Q9ESN9 1337 aa16.32■□□□□ 0.2
Ccdc88c-201ENSMUST00000068411 Arhgap27A2AB59 869 aa16.31■□□□□ 0.2
Ccdc88c-201ENSMUST00000068411 Ccdc9Q8VC31 543 aaKnown RBP16.3■□□□□ 0.2
Ccdc88c-201ENSMUST00000068411 Rrp7aQ9D1C9 280 aaKnown RBP16.28■□□□□ 0.2
Ccdc88c-201ENSMUST00000068411 Htatsf1Q8BGC0 757 aa16.28■□□□□ 0.2
Ccdc88c-201ENSMUST00000068411 Q8BT18 775 aa16.27■□□□□ 0.2
Ccdc88c-201ENSMUST00000068411 Rb1cc1Q9ESK9 1588 aa16.27■□□□□ 0.2
Ccdc88c-201ENSMUST00000068411 Stag3O70576 1240 aa16.27■□□□□ 0.2
Ccdc88c-201ENSMUST00000068411 Ccdc27Q3V036 639 aa16.27■□□□□ 0.2
Ccdc88c-201ENSMUST00000068411 Pes1Q9EQ61 584 aaKnown RBP16.27■□□□□ 0.19
Ccdc88c-201ENSMUST00000068411 PnnO35691 725 aaKnown RBP16.26■□□□□ 0.19
Ccdc88c-201ENSMUST00000068411 Ggt6Q6PDE7 497 aa16.26■□□□□ 0.19
Ccdc88c-201ENSMUST00000068411 Plin1Q8CGN5 517 aa16.25■□□□□ 0.19
Ccdc88c-201ENSMUST00000068411 Wwc2Q6NXJ0 1187 aa16.24■□□□□ 0.19
Ccdc88c-201ENSMUST00000068411 Hsp90b1P08113 802 aaKnown RBP16.23■□□□□ 0.19
Ccdc88c-201ENSMUST00000068411 Ubap1lG3UW59 384 aa16.23■□□□□ 0.19
Ccdc88c-201ENSMUST00000068411 Casc1Q6TDU8 730 aa16.22■□□□□ 0.19
Ccdc88c-201ENSMUST00000068411 Znf316Q6PGE4 1016 aa16.21■□□□□ 0.19
Ccdc88c-201ENSMUST00000068411 Ppm1gQ61074 542 aa16.2■□□□□ 0.18
Ccdc88c-201ENSMUST00000068411 Senp3Q9EP97 568 aaKnown RBP16.17■□□□□ 0.18
Ccdc88c-201ENSMUST00000068411 Sh3bp5Q9Z131 463 aa16.17■□□□□ 0.18
Ccdc88c-201ENSMUST00000068411 Map7O88735 730 aa16.16■□□□□ 0.18
Ccdc88c-201ENSMUST00000068411 Erich6bQ9D4S6 220 aa16.15■□□□□ 0.18
Ccdc88c-201ENSMUST00000068411 Kif15Q6P9L6 1387 aa16.15■□□□□ 0.18
Ccdc88c-201ENSMUST00000068411 Hspa5P20029 655 aaKnown RBP16.14■□□□□ 0.17
Ccdc88c-201ENSMUST00000068411 Pcmtd1P59913 357 aa16.14■□□□□ 0.17
Ccdc88c-201ENSMUST00000068411 U2surpQ6NV83 1029 aaKnown RBP16.14■□□□□ 0.17
Ccdc88c-201ENSMUST00000068411 Cwc22Q8C5N3 908 aaKnown RBP16.14■□□□□ 0.17
Ccdc88c-201ENSMUST00000068411 Dnttip2Q8R2M2 758 aaKnown RBP16.1■□□□□ 0.17
Ccdc88c-201ENSMUST00000068411 Rassf8Q8CJ96 419 aa16.09■□□□□ 0.17
Ccdc88c-201ENSMUST00000068411 Mtus2Q3UHD3 1353 aa16.09■□□□□ 0.17
Ccdc88c-201ENSMUST00000068411 Iqcf3Q9D498 203 aa16.09■□□□□ 0.17
Ccdc88c-201ENSMUST00000068411 Eea1Q8BL66 1411 aa16.09■□□□□ 0.17
Ccdc88c-201ENSMUST00000068411 Bcl11aQ9QYE3 773 aa16.08■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 Supt16hQ920B9 1047 aa16.08■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 Rwdd1Q9CQK7 243 aa16.07■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 NudcO35685 332 aaKnown RBP16.07■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 Stk26Q99JT2 416 aa16.07■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 Anapc15P60007 132 aa16.07■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 Speer4f1Q9D5Q6 258 aa16.06■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 Tnnt1O88346 262 aa16.05■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 Sin3aQ60520 1274 aaKnown RBP16.05■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 Znf330Q922H9 316 aa16.05■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 Tmco5bQ80X59 307 aa16.04■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 Cluap1Q8R3P7 413 aa16.04■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 KnstrnQ9D9Z1 312 aaKnown RBP16.03■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 Irx3P81067 507 aa16.03■□□□□ 0.16
Ccdc88c-201ENSMUST00000068411 Rundc1Q0VDN7 615 aa16.02■□□□□ 0.15
Ccdc88c-201ENSMUST00000068411 Chmp4bQ9D8B3 224 aaKnown RBP16.02■□□□□ 0.15
Ccdc88c-201ENSMUST00000068411 Ppm1fQ8CGA0 452 aa16.01■□□□□ 0.15
Ccdc88c-201ENSMUST00000068411 MccE9PWI3 1003 aa16.01■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms