RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Hnrnpul2Q00PI9 745 aaKnown RBP9.8□□□□□ -0.84
Scn3a-201ENSMUST00000066432 Supt5hO55201 1082 aaKnown RBP9.8□□□□□ -0.84
Scn3a-201ENSMUST00000066432 Anp32aO35381 247 aa9.78□□□□□ -0.84
Scn3a-201ENSMUST00000066432 Lmod2Q3UHZ5 550 aa9.78□□□□□ -0.84
Scn3a-201ENSMUST00000066432 CntlnA2AM05 1397 aa9.76□□□□□ -0.85
Scn3a-201ENSMUST00000066432 Cep162Q6ZQ06 1403 aa9.75□□□□□ -0.85
Scn3a-201ENSMUST00000066432 Chic1Q8CBW7 227 aa9.75□□□□□ -0.85
Scn3a-201ENSMUST00000066432 Arhgap35Q91YM2 1499 aa9.74□□□□□ -0.85
Scn3a-201ENSMUST00000066432 Gm13695A2AK44 830 aa9.74□□□□□ -0.85
Scn3a-201ENSMUST00000066432 Chmp4bQ9D8B3 224 aaKnown RBP9.74□□□□□ -0.85
Scn3a-201ENSMUST00000066432 Ccdc88bQ4QRL3 1481 aa9.73□□□□□ -0.85
Scn3a-201ENSMUST00000066432 Ccdc9Q8VC31 543 aaKnown RBP9.73□□□□□ -0.85
Scn3a-201ENSMUST00000066432 Carmil1Q6EDY6 1374 aa9.72□□□□□ -0.85
Scn3a-201ENSMUST00000066432 Map3k1P53349 1493 aa9.71□□□□□ -0.86
Scn3a-201ENSMUST00000066432 Ncoa2Q61026 1462 aa9.7□□□□□ -0.86
Scn3a-201ENSMUST00000066432 Cc2d2aQ8CFW7 1633 aa9.7□□□□□ -0.86
Scn3a-201ENSMUST00000066432 UacaQ8CGB3 1411 aa9.7□□□□□ -0.86
Scn3a-201ENSMUST00000066432 Erich6D3Z6S9 713 aa9.67□□□□□ -0.86
Scn3a-201ENSMUST00000066432 Kif27Q7M6Z4 1394 aa9.67□□□□□ -0.86
Scn3a-201ENSMUST00000066432 DiexfQ8BTT6 772 aaKnown RBP9.66□□□□□ -0.86
Scn3a-201ENSMUST00000066432 Ttbk1Q6PCN3 1308 aa9.66□□□□□ -0.86
Scn3a-201ENSMUST00000066432 4933416C03RikQ3V063 378 aa9.66□□□□□ -0.86
Scn3a-201ENSMUST00000066432 IqubQ8CDK3 788 aa9.65□□□□□ -0.86
Scn3a-201ENSMUST00000066432 Rock2P70336 1388 aa9.65□□□□□ -0.86
Scn3a-201ENSMUST00000066432 WrnO09053 1401 aa9.65□□□□□ -0.86
Scn3a-201ENSMUST00000066432 Top2aQ01320 1528 aaKnown RBP9.65□□□□□ -0.86
Scn3a-201ENSMUST00000066432 Rapgef2Q8CHG7 1496 aa9.65□□□□□ -0.86
Scn3a-201ENSMUST00000066432 Stard8Q8K031 1019 aa9.65□□□□□ -0.87
Scn3a-201ENSMUST00000066432 Cux2P70298 1426 aa9.65□□□□□ -0.87
Scn3a-201ENSMUST00000066432 Top2bQ64511 1612 aa9.64□□□□□ -0.87
Scn3a-201ENSMUST00000066432 Plekhh2Q8C115 1491 aa9.64□□□□□ -0.87
Scn3a-201ENSMUST00000066432 Atp1b4Q99ME6 356 aa9.64□□□□□ -0.87
Scn3a-201ENSMUST00000066432 Anks4bQ8K3X6 423 aa9.64□□□□□ -0.87
Scn3a-201ENSMUST00000066432 Mbd3Q9Z2D8 285 aaKnown RBP9.63□□□□□ -0.87
Scn3a-201ENSMUST00000066432 NrkQ9R0G8 1455 aa9.63□□□□□ -0.87
Scn3a-201ENSMUST00000066432 Efcab5A0JP43 1406 aa9.62□□□□□ -0.87
Scn3a-201ENSMUST00000066432 Fhad1A6PWD2 1420 aa9.61□□□□□ -0.87
Scn3a-201ENSMUST00000066432 LrpprcQ6PB66 1392 aaKnown RBP9.61□□□□□ -0.87
Scn3a-201ENSMUST00000066432 Safb2Q80YR5 991 aaKnown RBP9.6□□□□□ -0.87
Scn3a-201ENSMUST00000066432 Shroom4Q1W617 1475 aa9.58□□□□□ -0.88
Scn3a-201ENSMUST00000066432 Ankrd36D3Z4K0 1415 aa9.58□□□□□ -0.88
Scn3a-201ENSMUST00000066432 Iqcf3Q9D498 203 aa9.58□□□□□ -0.88
Scn3a-201ENSMUST00000066432 Aplp2Q06335 707 aa9.56□□□□□ -0.88
Scn3a-201ENSMUST00000066432 Srpk2O54781 681 aaKnown RBP9.53□□□□□ -0.88
Scn3a-201ENSMUST00000066432 Cecr2E9Q2Z1 1453 aa9.53□□□□□ -0.88
Scn3a-201ENSMUST00000066432 Arhgap27A2AB59 869 aa9.53□□□□□ -0.88
Scn3a-201ENSMUST00000066432 Ccnb3Q810T2 1396 aa9.53□□□□□ -0.88
Scn3a-201ENSMUST00000066432 AqrQ8CFQ3 1481 aaKnown RBP9.52□□□□□ -0.89
Scn3a-201ENSMUST00000066432 NudcO35685 332 aaKnown RBP9.51□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Pde3bQ61409 1100 aa9.51□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Mroh3A0A1D5RM54 893 aa9.5□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Lamc3Q9R0B6 1581 aa9.5□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Zbtb7cQ8VCZ7 619 aa9.5□□□□□ -0.89
Scn3a-201ENSMUST00000066432 AampJ3QN89 436 aa9.49□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Card11Q8CIS0 1159 aa9.48□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Aebp1Q640N1 1128 aa9.48□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Calr4Q3TQS0 420 aa9.48□□□□□ -0.89
Scn3a-201ENSMUST00000066432 TchhA0A0B4J1F9 1599 aa9.48□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Fkbp15Q6P9Q6 1216 aaKnown RBP9.47□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Pbrm1Q8BSQ9 1634 aaKnown RBP9.47□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Crocc2F6XLV1 1638 aa9.47□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Wdr62Q3U3T8 1523 aa9.47□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Chic2Q9D9G3 165 aa9.47□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Ifnlr1Q8CGK5 535 aa9.47□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Dhx29Q6PGC1 1365 aaKnown RBP9.47□□□□□ -0.89
Scn3a-201ENSMUST00000066432 PtmsQ9D0J8 101 aaKnown RBP9.47□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Map7O88735 730 aa9.47□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Mrc2Q64449 1479 aa9.47□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Ift140E9PY46 1464 aa9.46□□□□□ -0.89
Scn3a-201ENSMUST00000066432 Eif4g2Q62448 906 aaKnown RBP9.46□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Camsap1A2AHC3 1581 aa9.46□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Exosc9Q9JHI7 438 aaKnown RBP9.46□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Lemd3Q9WU40 921 aa9.46□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Eid3Q3V124 375 aa9.45□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Mrs2Q5NCE8 434 aa9.45□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Kif21aQ9QXL2 1672 aa9.45□□□□□ -0.9
Scn3a-201ENSMUST00000066432 AknaQ80VW7 1404 aa9.45□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Mapk8ip3Q9ESN9 1337 aa9.44□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Cc2d2bA0A286YDU8 1405 aa9.44□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Wdr43Q6ZQL4 677 aaKnown RBP9.44□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Nsd2Q8BVE8 1365 aa9.43□□□□□ -0.9
Scn3a-201ENSMUST00000066432 BicraF8VPZ9 1578 aa9.43□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Rgl3Q3UYI5 709 aa9.43□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Tmf1B9EKI3 1091 aa9.43□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Vps8Q0P5W1 1427 aa9.43□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Htatsf1Q8BGC0 757 aa9.42□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Grin2bQ01097 1482 aa9.41□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Rrp7aQ9D1C9 280 aaKnown RBP9.41□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Gm20521D3Z5F7 333 aa9.4□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Hsp90aa1P07901 733 aaKnown RBP9.4□□□□□ -0.9
Scn3a-201ENSMUST00000066432 HdgfP51859 237 aaKnown RBP9.4□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Duox2A2AQ99 1517 aa9.4□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Fgd1P52734 960 aa9.4□□□□□ -0.9
Scn3a-201ENSMUST00000066432 Rab11fip3Q8CHD8 1047 aa9.4□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Tiam1Q60610 1591 aa9.4□□□□□ -0.91
Scn3a-201ENSMUST00000066432 HnrnpuQ8VEK3 800 aaKnown RBP9.39□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Ccdc141E9Q8Q6 1531 aa9.39□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Nup155Q99P88 1391 aaKnown RBP9.38□□□□□ -0.91
Scn3a-201ENSMUST00000066432 Map4P27546 1125 aaKnown RBP9.38□□□□□ -0.91
Scn3a-201ENSMUST00000066432 SynmQ70IV5 1561 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms