RNA–Protein interactions for RNA: ENSMUST00000049404.12

Clasp1-201, Transcript of CLIP-associating protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clasp1, Length 7,797 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clasp1-201ENSMUST00000049404 IqubQ8CDK3 788 aa10.2□□□□□ -0.78
Clasp1-201ENSMUST00000049404 Upf2A2AT37 1269 aaKnown RBP10.19□□□□□ -0.78
Clasp1-201ENSMUST00000049404 Eid3Q3V124 375 aa10.18□□□□□ -0.78
Clasp1-201ENSMUST00000049404 Arhgap27A2AB59 869 aa10.18□□□□□ -0.78
Clasp1-201ENSMUST00000049404 Exosc9Q9JHI7 438 aaKnown RBP10.16□□□□□ -0.78
Clasp1-201ENSMUST00000049404 Kdm2aP59997 1161 aa10.15□□□□□ -0.78
Clasp1-201ENSMUST00000049404 Clstn2Q9ER65 966 aa10.14□□□□□ -0.79
Clasp1-201ENSMUST00000049404 DekQ7TNV0 380 aaKnown RBP10.13□□□□□ -0.79
Clasp1-201ENSMUST00000049404 Clip1Q922J3 1391 aa10.12□□□□□ -0.79
Clasp1-201ENSMUST00000049404 Grwd1Q810D6 446 aaKnown RBP10.12□□□□□ -0.79
Clasp1-201ENSMUST00000049404 Lmod3E9QA62 571 aa10.1□□□□□ -0.79
Clasp1-201ENSMUST00000049404 Stk24Q99KH8 431 aa10.09□□□□□ -0.79
Clasp1-201ENSMUST00000049404 Srpk2O54781 681 aaKnown RBP10.09□□□□□ -0.79
Clasp1-201ENSMUST00000049404 Supt5hO55201 1082 aaKnown RBP10.08□□□□□ -0.8
Clasp1-201ENSMUST00000049404 Arid4bA2CG63 1314 aaKnown RBP10.06□□□□□ -0.8
Clasp1-201ENSMUST00000049404 Ercc6F8VPZ5 1481 aa10.06□□□□□ -0.8
Clasp1-201ENSMUST00000049404 Stag3O70576 1240 aa10.06□□□□□ -0.8
Clasp1-201ENSMUST00000049404 Gm20521D3Z5F7 333 aa10.05□□□□□ -0.8
Clasp1-201ENSMUST00000049404 1700019A02RikA0A087WPV9 146 aa10.05□□□□□ -0.8
Clasp1-201ENSMUST00000049404 Slc4a1apE9PX68 744 aa10.04□□□□□ -0.8
Clasp1-201ENSMUST00000049404 Brd4Q9ESU6 1400 aaKnown RBP10.03□□□□□ -0.8
Clasp1-201ENSMUST00000049404 Chrna2Q91X60 512 aa10.03□□□□□ -0.8
Clasp1-201ENSMUST00000049404 Rgl3Q3UYI5 709 aa10.03□□□□□ -0.8
Clasp1-201ENSMUST00000049404 PnnO35691 725 aaKnown RBP10.03□□□□□ -0.8
Clasp1-201ENSMUST00000049404 BlmO88700 1416 aa10.03□□□□□ -0.8
Clasp1-201ENSMUST00000049404 Gm6268A2A3U9 297 aa10.02□□□□□ -0.81
Clasp1-201ENSMUST00000049404 Eif4g2Q62448 906 aaKnown RBP10.02□□□□□ -0.81
Clasp1-201ENSMUST00000049404 Mroh3A0A1D5RM54 893 aa10□□□□□ -0.81
Clasp1-201ENSMUST00000049404 Pes1Q9EQ61 584 aaKnown RBP10□□□□□ -0.81
Clasp1-201ENSMUST00000049404 Rrp7aQ9D1C9 280 aaKnown RBP10□□□□□ -0.81
Clasp1-201ENSMUST00000049404 Ciz1Q8VEH2 845 aa10□□□□□ -0.81
Clasp1-201ENSMUST00000049404 Psme1P97371 249 aa9.98□□□□□ -0.81
Clasp1-201ENSMUST00000049404 Sox12Q04890 314 aa9.97□□□□□ -0.81
Clasp1-201ENSMUST00000049404 Sh3bp5Q9Z131 463 aa9.97□□□□□ -0.81
Clasp1-201ENSMUST00000049404 Rb1cc1Q9ESK9 1588 aa9.96□□□□□ -0.81
Clasp1-201ENSMUST00000049404 Anp32aO35381 247 aa9.96□□□□□ -0.81
Clasp1-201ENSMUST00000049404 ClspnQ80YR7 1315 aa9.96□□□□□ -0.81
Clasp1-201ENSMUST00000049404 Bcl11bQ99PV8 884 aa9.96□□□□□ -0.81
Clasp1-201ENSMUST00000049404 Plin1Q8CGN5 517 aa9.96□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Prm3Q62100 101 aa9.96□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Mapk8ip3Q9ESN9 1337 aa9.95□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Cnga1P29974 684 aa9.95□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Iqcf3Q9D498 203 aa9.95□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Isy1Q69ZQ2 285 aaKnown RBP9.94□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Noc3lQ8VI84 807 aaKnown RBP9.94□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Arid3cA6PWV5 409 aa9.93□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Ccer2J3QPU5 274 aa9.93□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Kif15Q6P9L6 1387 aa9.92□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Nol10Q5RJG1 687 aaKnown RBP9.91□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Neurod2Q62414 383 aa9.91□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Stk26Q99JT2 416 aa9.91□□□□□ -0.82
Clasp1-201ENSMUST00000049404 AknaQ80VW7 1404 aa9.91□□□□□ -0.82
Clasp1-201ENSMUST00000049404 HdgfP51859 237 aaKnown RBP9.91□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Apbb1Q9QXJ1 710 aa9.9□□□□□ -0.82
Clasp1-201ENSMUST00000049404 Ccdc18Q640L5 1455 aa9.9□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Ppp4r2Q0VGB7 417 aa9.89□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Txndc2Q6P902 515 aa9.89□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Rtf1A2AQ19 715 aaKnown RBP9.88□□□□□ -0.83
Clasp1-201ENSMUST00000049404 PtmaP26350 111 aa9.88□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Tnnt1O88346 262 aa9.87□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Vps53Q8CCB4 832 aa9.87□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Tomm22Q9CPQ3 142 aa9.87□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Hsp90ab1P11499 724 aaKnown RBP9.87□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Rassf8Q8CJ96 419 aa9.86□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Anapc15P60007 132 aa9.86□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Pak3Q61036 559 aa9.85□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Anks4bQ8K3X6 423 aa9.85□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Cep164Q5DU05 1446 aa9.85□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Pip4k2bQ80XI4 416 aa9.84□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Gm38655A0A286YDK6 273 aa9.84□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Trim30dE9PWL0 497 aa9.84□□□□□ -0.83
Clasp1-201ENSMUST00000049404 Armcx1Q9CX83 456 aa9.84□□□□□ -0.83
Clasp1-201ENSMUST00000049404 U2surpQ6NV83 1029 aaKnown RBP9.83□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Fbln2P37889 1221 aa9.83□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Mrs2Q5NCE8 434 aa9.83□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Zfp777B9EKF4 885 aa9.82□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Znf316Q6PGE4 1016 aa9.82□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Card11Q8CIS0 1159 aa9.82□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Rsf1E9PWW9 1441 aaKnown RBP9.82□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Hsp90b1P08113 802 aaKnown RBP9.81□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Trim44Q9QXA7 346 aa9.81□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Setd5Q5XJV7 1441 aa9.81□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Dnai2A2AC93 623 aa9.8□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Paf1Q8K2T8 535 aa9.8□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Mtus2Q3UHD3 1353 aa9.8□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Kcnn1Q9EQR3 537 aa9.79□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Calr4Q3TQS0 420 aa9.79□□□□□ -0.84
Clasp1-201ENSMUST00000049404 Dcaf1Q80TR8 1506 aa9.77□□□□□ -0.85
Clasp1-201ENSMUST00000049404 Senp3Q9EP97 568 aaKnown RBP9.77□□□□□ -0.85
Clasp1-201ENSMUST00000049404 Chmp3Q9CQ10 224 aa9.76□□□□□ -0.85
Clasp1-201ENSMUST00000049404 NudcO35685 332 aaKnown RBP9.75□□□□□ -0.85
Clasp1-201ENSMUST00000049404 Birc3O08863 600 aa9.75□□□□□ -0.85
Clasp1-201ENSMUST00000049404 Plcb2A3KGF7 1181 aa9.74□□□□□ -0.85
Clasp1-201ENSMUST00000049404 Q3TQI7 289 aaKnown RBP9.74□□□□□ -0.85
Clasp1-201ENSMUST00000049404 Ccar1Q8CH18 1146 aaKnown RBP9.74□□□□□ -0.85
Clasp1-201ENSMUST00000049404 Sf3b2Q3UJB0 878 aaKnown RBP9.73□□□□□ -0.85
Clasp1-201ENSMUST00000049404 Dbr1Q923B1 550 aa9.73□□□□□ -0.85
Clasp1-201ENSMUST00000049404 Ap3b2Q9JME5 1082 aa9.72□□□□□ -0.85
Clasp1-201ENSMUST00000049404 Abcc8B2RUS7 1588 aa9.72□□□□□ -0.85
Clasp1-201ENSMUST00000049404 Chmp4bQ9D8B3 224 aaKnown RBP9.71□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms