RNA–Protein interactions for RNA: ENSMUST00000048691.4

Ptchd4-201, Transcript of Patched domain-containing protein 4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ptchd4, Length 6,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4-201ENSMUST00000048691 Apbb1Q9QXJ1 710 aa13.26□□□□□ -0.29
Ptchd4-201ENSMUST00000048691 Fam71e1A1L3C1 212 aa13.25□□□□□ -0.29
Ptchd4-201ENSMUST00000048691 Rgl3Q3UYI5 709 aa13.21□□□□□ -0.29
Ptchd4-201ENSMUST00000048691 Fgd1P52734 960 aa13.19□□□□□ -0.3
Ptchd4-201ENSMUST00000048691 BlmO88700 1416 aa13.19□□□□□ -0.3
Ptchd4-201ENSMUST00000048691 Ecm2Q5FW85 670 aa13.18□□□□□ -0.3
Ptchd4-201ENSMUST00000048691 Trim30dE9PWL0 497 aa13.17□□□□□ -0.3
Ptchd4-201ENSMUST00000048691 Hsp90aa1P07901 733 aaKnown RBP13.17□□□□□ -0.3
Ptchd4-201ENSMUST00000048691 1700123L14RikQ3V2K7 440 aa13.17□□□□□ -0.3
Ptchd4-201ENSMUST00000048691 Ubl4bQ9CQ84 188 aa13.17□□□□□ -0.3
Ptchd4-201ENSMUST00000048691 CanxP35564 591 aaKnown RBP13.17□□□□□ -0.3
Ptchd4-201ENSMUST00000048691 Hsp90ab1P11499 724 aaKnown RBP13.15□□□□□ -0.3
Ptchd4-201ENSMUST00000048691 Grwd1Q810D6 446 aaKnown RBP13.15□□□□□ -0.3
Ptchd4-201ENSMUST00000048691 Dbr1Q923B1 550 aa13.15□□□□□ -0.3
Ptchd4-201ENSMUST00000048691 Armcx1Q9CX83 456 aa13.14□□□□□ -0.31
Ptchd4-201ENSMUST00000048691 Neurod2Q62414 383 aa13.14□□□□□ -0.31
Ptchd4-201ENSMUST00000048691 Kdm2aP59997 1161 aa13.13□□□□□ -0.31
Ptchd4-201ENSMUST00000048691 Spryd3E9Q9B3 442 aa13.12□□□□□ -0.31
Ptchd4-201ENSMUST00000048691 Safb2Q80YR5 991 aaKnown RBP13.11□□□□□ -0.31
Ptchd4-201ENSMUST00000048691 SafbD3YXK2 937 aaKnown RBP13.1□□□□□ -0.31
Ptchd4-201ENSMUST00000048691 Rtn4Q99P72 1162 aaKnown RBP13.09□□□□□ -0.31
Ptchd4-201ENSMUST00000048691 Dcaf1Q80TR8 1506 aa13.09□□□□□ -0.31
Ptchd4-201ENSMUST00000048691 Cep164Q5DU05 1446 aa13.09□□□□□ -0.31
Ptchd4-201ENSMUST00000048691 Ofd1Q80Z25 1017 aa13.08□□□□□ -0.32
Ptchd4-201ENSMUST00000048691 Slc4a3P16283 1227 aa13.08□□□□□ -0.32
Ptchd4-201ENSMUST00000048691 Trim44Q9QXA7 346 aa13.06□□□□□ -0.32
Ptchd4-201ENSMUST00000048691 Brd4Q9ESU6 1400 aaKnown RBP13.04□□□□□ -0.32
Ptchd4-201ENSMUST00000048691 Plcb2A3KGF7 1181 aa13.04□□□□□ -0.32
Ptchd4-201ENSMUST00000048691 B4galnt3Q6L8S8 986 aa13.04□□□□□ -0.32
Ptchd4-201ENSMUST00000048691 NgefQ8CHT1 710 aa13.04□□□□□ -0.32
Ptchd4-201ENSMUST00000048691 Clstn1Q9EPL2 979 aa13.04□□□□□ -0.32
Ptchd4-201ENSMUST00000048691 Ccer2J3QPU5 274 aa13.04□□□□□ -0.32
Ptchd4-201ENSMUST00000048691 PtmaP26350 111 aa13.03□□□□□ -0.32
Ptchd4-201ENSMUST00000048691 Hdac5Q9Z2V6 1113 aa13.02□□□□□ -0.33
Ptchd4-201ENSMUST00000048691 1700019A02RikA0A087WPV9 146 aa12.99□□□□□ -0.33
Ptchd4-201ENSMUST00000048691 Gm6268A2A3U9 297 aa12.98□□□□□ -0.33
Ptchd4-201ENSMUST00000048691 Cnga1P29974 684 aa12.98□□□□□ -0.33
Ptchd4-201ENSMUST00000048691 Setd5Q5XJV7 1441 aa12.98□□□□□ -0.33
Ptchd4-201ENSMUST00000048691 Abcc8B2RUS7 1588 aa12.96□□□□□ -0.34
Ptchd4-201ENSMUST00000048691 Card11Q8CIS0 1159 aa12.93□□□□□ -0.34
Ptchd4-201ENSMUST00000048691 Stk24Q99KH8 431 aa12.93□□□□□ -0.34
Ptchd4-201ENSMUST00000048691 Senp3Q9EP97 568 aaKnown RBP12.91□□□□□ -0.34
Ptchd4-201ENSMUST00000048691 Exosc9Q9JHI7 438 aaKnown RBP12.91□□□□□ -0.34
Ptchd4-201ENSMUST00000048691 Gm20521D3Z5F7 333 aa12.9□□□□□ -0.34
Ptchd4-201ENSMUST00000048691 Plin1Q8CGN5 517 aa12.9□□□□□ -0.34
Ptchd4-201ENSMUST00000048691 Rb1cc1Q9ESK9 1588 aa12.9□□□□□ -0.34
Ptchd4-201ENSMUST00000048691 Mroh3A0A1D5RM54 893 aa12.9□□□□□ -0.34
Ptchd4-201ENSMUST00000048691 Arhgap27A2AB59 869 aa12.9□□□□□ -0.34
Ptchd4-201ENSMUST00000048691 Wwc2Q6NXJ0 1187 aa12.89□□□□□ -0.35
Ptchd4-201ENSMUST00000048691 Srpk2O54781 681 aaKnown RBP12.89□□□□□ -0.35
Ptchd4-201ENSMUST00000048691 Clstn2Q9ER65 966 aa12.89□□□□□ -0.35
Ptchd4-201ENSMUST00000048691 Znf326O88291 580 aa12.87□□□□□ -0.35
Ptchd4-201ENSMUST00000048691 IqubQ8CDK3 788 aa12.86□□□□□ -0.35
Ptchd4-201ENSMUST00000048691 Rrp7aQ9D1C9 280 aaKnown RBP12.86□□□□□ -0.35
Ptchd4-201ENSMUST00000048691 MyclP10166 368 aa12.83□□□□□ -0.36
Ptchd4-201ENSMUST00000048691 Stag3O70576 1240 aa12.83□□□□□ -0.36
Ptchd4-201ENSMUST00000048691 Hspa5P20029 655 aaKnown RBP12.82□□□□□ -0.36
Ptchd4-201ENSMUST00000048691 Mapk8ip3Q9ESN9 1337 aa12.82□□□□□ -0.36
Ptchd4-201ENSMUST00000048691 Ccdc27Q3V036 639 aa12.81□□□□□ -0.36
Ptchd4-201ENSMUST00000048691 Znf316Q6PGE4 1016 aa12.81□□□□□ -0.36
Ptchd4-201ENSMUST00000048691 Sin3aQ60520 1274 aaKnown RBP12.79□□□□□ -0.36
Ptchd4-201ENSMUST00000048691 Bcl11aQ9QYE3 773 aa12.79□□□□□ -0.36
Ptchd4-201ENSMUST00000048691 Hsp90b1P08113 802 aaKnown RBP12.77□□□□□ -0.36
Ptchd4-201ENSMUST00000048691 Pes1Q9EQ61 584 aaKnown RBP12.76□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 Htatsf1Q8BGC0 757 aa12.75□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 U2surpQ6NV83 1029 aaKnown RBP12.75□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 Kif15Q6P9L6 1387 aa12.74□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 Erich6bQ9D4S6 220 aa12.74□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 Supt16hQ920B9 1047 aa12.74□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 Pcmtd1P59913 357 aa12.74□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 Znf330Q922H9 316 aa12.73□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 Stk26Q99JT2 416 aa12.72□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 PnnO35691 725 aaKnown RBP12.72□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 Casc1Q6TDU8 730 aa12.72□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 Sh3bp5Q9Z131 463 aa12.72□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 Dnttip2Q8R2M2 758 aaKnown RBP12.72□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 Tnnt1O88346 262 aa12.71□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 Ppm1gQ61074 542 aa12.71□□□□□ -0.37
Ptchd4-201ENSMUST00000048691 Cluap1Q8R3P7 413 aa12.71□□□□□ -0.38
Ptchd4-201ENSMUST00000048691 Ccdc9Q8VC31 543 aaKnown RBP12.71□□□□□ -0.38
Ptchd4-201ENSMUST00000048691 Speer4f1Q9D5Q6 258 aa12.69□□□□□ -0.38
Ptchd4-201ENSMUST00000048691 Exoc6Q8R313 802 aa12.68□□□□□ -0.38
Ptchd4-201ENSMUST00000048691 Tmco5bQ80X59 307 aa12.67□□□□□ -0.38
Ptchd4-201ENSMUST00000048691 Rundc1Q0VDN7 615 aa12.67□□□□□ -0.38
Ptchd4-201ENSMUST00000048691 Taok2Q6ZQ29 1240 aa12.67□□□□□ -0.38
Ptchd4-201ENSMUST00000048691 Eea1Q8BL66 1411 aa12.67□□□□□ -0.38
Ptchd4-201ENSMUST00000048691 Rassf8Q8CJ96 419 aa12.66□□□□□ -0.38
Ptchd4-201ENSMUST00000048691 Map7O88735 730 aa12.66□□□□□ -0.38
Ptchd4-201ENSMUST00000048691 Mtus2Q3UHD3 1353 aa12.66□□□□□ -0.38
Ptchd4-201ENSMUST00000048691 Rwdd1Q9CQK7 243 aa12.65□□□□□ -0.38
Ptchd4-201ENSMUST00000048691 Cwc22Q8C5N3 908 aaKnown RBP12.65□□□□□ -0.38
Ptchd4-201ENSMUST00000048691 Q8BT18 775 aa12.64□□□□□ -0.39
Ptchd4-201ENSMUST00000048691 Mical1Q8VDP3 1048 aa12.64□□□□□ -0.39
Ptchd4-201ENSMUST00000048691 Irx3P81067 507 aa12.63□□□□□ -0.39
Ptchd4-201ENSMUST00000048691 Ifit1bl1D3Z6F0 470 aa12.63□□□□□ -0.39
Ptchd4-201ENSMUST00000048691 Pibf1E9Q6K3 756 aa12.62□□□□□ -0.39
Ptchd4-201ENSMUST00000048691 Sox12Q04890 314 aa12.62□□□□□ -0.39
Ptchd4-201ENSMUST00000048691 Anapc15P60007 132 aa12.62□□□□□ -0.39
Ptchd4-201ENSMUST00000048691 GorabQ8BRM2 368 aa12.62□□□□□ -0.39
Ptchd4-201ENSMUST00000048691 Mfap1aC0HKD8 439 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms