RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Lmod2Q3UHZ5 550 aa9.5□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Rsf1E9PWW9 1441 aaKnown RBP9.5□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Upf2A2AT37 1269 aaKnown RBP9.49□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Pknox2Q8BG99 474 aa9.49□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Ifnlr1Q8CGK5 535 aa9.48□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Taok2Q6ZQ29 1240 aa9.48□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Zbtb4Q5F293 982 aa9.47□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Gtf3c3Q3TMP1 882 aa9.47□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Trim44Q9QXA7 346 aa9.47□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Os9Q8K2C7 672 aa9.46□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Supt16hQ920B9 1047 aa9.46□□□□□ -0.89
Smc1a-201ENSMUST00000045312 Hdac5Q9Z2V6 1113 aa9.46□□□□□ -0.89
Smc1a-201ENSMUST00000045312 ScribQ80U72 1612 aa9.46□□□□□ -0.9
Smc1a-201ENSMUST00000045312 Pds5bQ4VA53 1446 aaKnown RBP9.45□□□□□ -0.9
Smc1a-201ENSMUST00000045312 Vsig10D3YX43 558 aa9.45□□□□□ -0.9
Smc1a-201ENSMUST00000045312 Kif15Q6P9L6 1387 aa9.45□□□□□ -0.9
Smc1a-201ENSMUST00000045312 CatipB9EKE5 520 aa9.44□□□□□ -0.9
Smc1a-201ENSMUST00000045312 Rad21Q61550 635 aaKnown RBP9.43□□□□□ -0.9
Smc1a-201ENSMUST00000045312 Polr3glQ8R0C0 218 aa9.43□□□□□ -0.9
Smc1a-201ENSMUST00000045312 Slc4a3P16283 1227 aa9.42□□□□□ -0.9
Smc1a-201ENSMUST00000045312 DekQ7TNV0 380 aaKnown RBP9.42□□□□□ -0.9
Smc1a-201ENSMUST00000045312 AU015836B2RUM3 263 aa9.41□□□□□ -0.9
Smc1a-201ENSMUST00000045312 Ccdc18Q640L5 1455 aa9.4□□□□□ -0.9
Smc1a-201ENSMUST00000045312 Spryd3E9Q9B3 442 aa9.39□□□□□ -0.91
Smc1a-201ENSMUST00000045312 Trim30dE9PWL0 497 aa9.39□□□□□ -0.91
Smc1a-201ENSMUST00000045312 Hsp90ab1P11499 724 aaKnown RBP9.38□□□□□ -0.91
Smc1a-201ENSMUST00000045312 Nolc1E9Q5C9 702 aaKnown RBP9.37□□□□□ -0.91
Smc1a-201ENSMUST00000045312 Ccer2J3QPU5 274 aa9.37□□□□□ -0.91
Smc1a-201ENSMUST00000045312 Ofd1Q80Z25 1017 aa9.35□□□□□ -0.91
Smc1a-201ENSMUST00000045312 Prdm10Q3UTQ7 1184 aa9.34□□□□□ -0.91
Smc1a-201ENSMUST00000045312 Plcd4Q8K3R3 807 aa9.34□□□□□ -0.91
Smc1a-201ENSMUST00000045312 Setd5Q5XJV7 1441 aa9.34□□□□□ -0.91
Smc1a-201ENSMUST00000045312 Htatsf1Q8BGC0 757 aa9.34□□□□□ -0.91
Smc1a-201ENSMUST00000045312 Smarca2Q6DIC0 1577 aa9.34□□□□□ -0.91
Smc1a-201ENSMUST00000045312 Nlrp6Q91WS2 869 aa9.33□□□□□ -0.92
Smc1a-201ENSMUST00000045312 Arid4bA2CG63 1314 aaKnown RBP9.32□□□□□ -0.92
Smc1a-201ENSMUST00000045312 Dnttip2Q8R2M2 758 aaKnown RBP9.32□□□□□ -0.92
Smc1a-201ENSMUST00000045312 Tnnt2P50752 301 aa9.32□□□□□ -0.92
Smc1a-201ENSMUST00000045312 Plcb2A3KGF7 1181 aa9.31□□□□□ -0.92
Smc1a-201ENSMUST00000045312 Ppm1gQ61074 542 aa9.31□□□□□ -0.92
Smc1a-201ENSMUST00000045312 Fmn1Q05860 1466 aa9.31□□□□□ -0.92
Smc1a-201ENSMUST00000045312 BlmO88700 1416 aa9.31□□□□□ -0.92
Smc1a-201ENSMUST00000045312 Rangap1P46061 589 aaKnown RBP9.3□□□□□ -0.92
Smc1a-201ENSMUST00000045312 Rtn4Q99P72 1162 aaKnown RBP9.3□□□□□ -0.92
Smc1a-201ENSMUST00000045312 Ipo9Q91YE6 1041 aa9.3□□□□□ -0.92
Smc1a-201ENSMUST00000045312 CftrP26361 1476 aa9.3□□□□□ -0.92
Smc1a-201ENSMUST00000045312 Tcerg1Q8CGF7 1100 aaKnown RBP9.29□□□□□ -0.92
Smc1a-201ENSMUST00000045312 Dbr1Q923B1 550 aa9.29□□□□□ -0.92
Smc1a-201ENSMUST00000045312 Fkbp15Q6P9Q6 1216 aaKnown RBP9.28□□□□□ -0.92
Smc1a-201ENSMUST00000045312 B4galnt3Q6L8S8 986 aa9.28□□□□□ -0.92
Smc1a-201ENSMUST00000045312 Eea1Q8BL66 1411 aa9.28□□□□□ -0.92
Smc1a-201ENSMUST00000045312 PtmaP26350 111 aa9.27□□□□□ -0.93
Smc1a-201ENSMUST00000045312 Atad2bE9Q166 1460 aaKnown RBP9.26□□□□□ -0.93
Smc1a-201ENSMUST00000045312 Cecr2E9Q2Z1 1453 aa9.25□□□□□ -0.93
Smc1a-201ENSMUST00000045312 Ccdc88bQ4QRL3 1481 aa9.24□□□□□ -0.93
Smc1a-201ENSMUST00000045312 Apbb1Q9QXJ1 710 aa9.23□□□□□ -0.93
Smc1a-201ENSMUST00000045312 ChgaP26339 463 aaKnown RBP9.22□□□□□ -0.93
Smc1a-201ENSMUST00000045312 Smarca4Q3TKT4 1613 aaKnown RBP9.22□□□□□ -0.93
Smc1a-201ENSMUST00000045312 Dnai1Q8C0M8 701 aa9.22□□□□□ -0.93
Smc1a-201ENSMUST00000045312 IbspQ61711 324 aa9.21□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Wwc2Q6NXJ0 1187 aa9.21□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Znf316Q6PGE4 1016 aa9.21□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Clstn2Q9ER65 966 aa9.2□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Gm13697A2AK42 830 aa9.2□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Chic2Q9D9G3 165 aa9.2□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Synj1Q8CHC4 1574 aa9.19□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Erich6bQ9D4S6 220 aa9.18□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Phldb1Q6PDH0 1371 aaKnown RBP9.18□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Erich6D3Z6S9 713 aa9.17□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Cep162Q6ZQ06 1403 aa9.17□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Cttnbp2B9EJA2 1648 aa9.17□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Rrp12Q6P5B0 1295 aaKnown RBP9.17□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Trim26Q99PN3 545 aa9.17□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Chmp5Q9D7S9 219 aa9.15□□□□□ -0.94
Smc1a-201ENSMUST00000045312 Cux2P70298 1426 aa9.13□□□□□ -0.95
Smc1a-201ENSMUST00000045312 Arhgap27A2AB59 869 aa9.13□□□□□ -0.95
Smc1a-201ENSMUST00000045312 MsnP26041 577 aaKnown RBP9.13□□□□□ -0.95
Smc1a-201ENSMUST00000045312 Armcx1Q9CX83 456 aa9.12□□□□□ -0.95
Smc1a-201ENSMUST00000045312 Ipo4Q8VI75 1082 aa9.12□□□□□ -0.95
Smc1a-201ENSMUST00000045312 Pdcl3Q8BVF2 240 aa9.11□□□□□ -0.95
Smc1a-201ENSMUST00000045312 Sin3aQ60520 1274 aaKnown RBP9.1□□□□□ -0.95
Smc1a-201ENSMUST00000045312 Iqgap2Q3UQ44 1575 aa9.09□□□□□ -0.95
Smc1a-201ENSMUST00000045312 Neurod2Q62414 383 aa9.09□□□□□ -0.95
Smc1a-201ENSMUST00000045312 SlkO54988 1233 aa9.09□□□□□ -0.95
Smc1a-201ENSMUST00000045312 Atp1b4Q99ME6 356 aa9.09□□□□□ -0.95
Smc1a-201ENSMUST00000045312 Hspa5P20029 655 aaKnown RBP9.09□□□□□ -0.95
Smc1a-201ENSMUST00000045312 Fbxo2Q80UW2 297 aa9.09□□□□□ -0.95
Smc1a-201ENSMUST00000045312 Rgl3Q3UYI5 709 aa9.08□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Exoc6Q8R313 802 aa9.08□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Pak3Q61036 559 aa9.08□□□□□ -0.96
Smc1a-201ENSMUST00000045312 EspnQ9ET47 871 aa9.08□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Mia2Q91ZV0 1396 aa9.08□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Ddrgk1Q80WW9 315 aa9.07□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Fgd1P52734 960 aa9.06□□□□□ -0.96
Smc1a-201ENSMUST00000045312 VgfQ0VGU4 617 aa9.06□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Sart3Q9JLI8 962 aaKnown RBP9.06□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Gm13695A2AK44 830 aa9.05□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Znf692Q3U381 531 aa9.05□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Kif27Q7M6Z4 1394 aa9.05□□□□□ -0.96
Smc1a-201ENSMUST00000045312 Gm6268A2A3U9 297 aa9.05□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 56.2 ms