RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Clstn2Q9ER65 966 aa30,52■■■□□ 2,48
Sh3rf1-201ENSMUST00000034060 Hsp90ab1P11499 724 aaKnown RBP30,52■■■□□ 2,48
Sh3rf1-201ENSMUST00000034060 Htatsf1Q8BGC0 757 aa30,51■■■□□ 2,47
Sh3rf1-201ENSMUST00000034060 BlmO88700 1416 aa30,44■■■□□ 2,46
Sh3rf1-201ENSMUST00000034060 Lmod3E9QA62 571 aa30,42■■■□□ 2,46
Sh3rf1-201ENSMUST00000034060 Rb1cc1Q9ESK9 1588 aa30,39■■■□□ 2,46
Sh3rf1-201ENSMUST00000034060 Trim30dE9PWL0 497 aa30,35■■■□□ 2,45
Sh3rf1-201ENSMUST00000034060 Gm13695A2AK44 830 aa30,34■■■□□ 2,45
Sh3rf1-201ENSMUST00000034060 Ppm1gQ61074 542 aa30,34■■■□□ 2,45
Sh3rf1-201ENSMUST00000034060 Ofd1Q80Z25 1017 aa30,34■■■□□ 2,45
Sh3rf1-201ENSMUST00000034060 Chic2Q9D9G3 165 aa30,31■■■□□ 2,44
Sh3rf1-201ENSMUST00000034060 Aebp2Q9Z248 504 aaKnown RBP30,29■■■□□ 2,44
Sh3rf1-201ENSMUST00000034060 Fgd1P52734 960 aa30,28■■■□□ 2,44
Sh3rf1-201ENSMUST00000034060 PtmaP26350 111 aa30,26■■■□□ 2,43
Sh3rf1-201ENSMUST00000034060 Bcl11aQ9QYE3 773 aa30,26■■■□□ 2,43
Sh3rf1-201ENSMUST00000034060 Ifnlr1Q8CGK5 535 aa30,21■■■□□ 2,43
Sh3rf1-201ENSMUST00000034060 Setd5Q5XJV7 1441 aa30,21■■■□□ 2,43
Sh3rf1-201ENSMUST00000034060 Vsig10D3YX43 558 aa30,2■■■□□ 2,42
Sh3rf1-201ENSMUST00000034060 Irx3P81067 507 aa30,2■■■□□ 2,42
Sh3rf1-201ENSMUST00000034060 Rangap1P46061 589 aaKnown RBP30,16■■■□□ 2,42
Sh3rf1-201ENSMUST00000034060 Cwc22Q8C5N3 908 aaKnown RBP30,16■■■□□ 2,42
Sh3rf1-201ENSMUST00000034060 Plcb2A3KGF7 1181 aa30,1■■■□□ 2,41
Sh3rf1-201ENSMUST00000034060 Fkbp15Q6P9Q6 1216 aaKnown RBP30,09■■■□□ 2,41
Sh3rf1-201ENSMUST00000034060 Adam1bQ8R534 806 aa30,08■■■□□ 2,41
Sh3rf1-201ENSMUST00000034060 Mbd3Q9Z2D8 285 aaKnown RBP30,08■■■□□ 2,41
Sh3rf1-201ENSMUST00000034060 Chmp4bQ9D8B3 224 aaKnown RBP30,03■■■□□ 2,4
Sh3rf1-201ENSMUST00000034060 Map7O88735 730 aa30,01■■■□□ 2,39
Sh3rf1-201ENSMUST00000034060 Rgl3Q3UYI5 709 aa29,98■■■□□ 2,39
Sh3rf1-201ENSMUST00000034060 AU015836B2RUM3 263 aa29,97■■■□□ 2,39
Sh3rf1-201ENSMUST00000034060 Golga3P55937 1487 aa29,96■■■□□ 2,39
Sh3rf1-201ENSMUST00000034060 P3h3Q8CG70 732 aa29,96■■■□□ 2,39
Sh3rf1-201ENSMUST00000034060 Eea1Q8BL66 1411 aa29,96■■■□□ 2,39
Sh3rf1-201ENSMUST00000034060 Trim26Q99PN3 545 aa29,93■■■□□ 2,38
Sh3rf1-201ENSMUST00000034060 Card11Q8CIS0 1159 aa29,89■■■□□ 2,37
Sh3rf1-201ENSMUST00000034060 Mia2Q91ZV0 1396 aa29,88■■■□□ 2,37
Sh3rf1-201ENSMUST00000034060 Tcerg1Q8CGF7 1100 aaKnown RBP29,86■■■□□ 2,37
Sh3rf1-201ENSMUST00000034060 Ubl4bQ9CQ84 188 aa29,8■■■□□ 2,36
Sh3rf1-201ENSMUST00000034060 Casc1Q6TDU8 730 aa29,78■■■□□ 2,36
Sh3rf1-201ENSMUST00000034060 Tnnt2P50752 301 aa29,77■■■□□ 2,36
Sh3rf1-201ENSMUST00000034060 IqubQ8CDK3 788 aa29,75■■■□□ 2,35
Sh3rf1-201ENSMUST00000034060 Arid4bA2CG63 1314 aaKnown RBP29,75■■■□□ 2,35
Sh3rf1-201ENSMUST00000034060 Mapk8ip3Q9ESN9 1337 aa29,72■■■□□ 2,35
Sh3rf1-201ENSMUST00000034060 PtmsQ9D0J8 101 aaKnown RBP29,72■■■□□ 2,35
Sh3rf1-201ENSMUST00000034060 SafbD3YXK2 937 aaKnown RBP29,71■■■□□ 2,35
Sh3rf1-201ENSMUST00000034060 KnstrnQ9D9Z1 312 aaKnown RBP29,71■■■□□ 2,35
Sh3rf1-201ENSMUST00000034060 Baz1aO88379 1555 aa29,7■■■□□ 2,35
Sh3rf1-201ENSMUST00000034060 NudcO35685 332 aaKnown RBP29,7■■■□□ 2,34
Sh3rf1-201ENSMUST00000034060 Ipo9Q91YE6 1041 aa29,69■■■□□ 2,34
Sh3rf1-201ENSMUST00000034060 Apbb1Q9QXJ1 710 aa29,69■■■□□ 2,34
Sh3rf1-201ENSMUST00000034060 Rwdd1Q9CQK7 243 aa29,66■■■□□ 2,34
Sh3rf1-201ENSMUST00000034060 Dnttip2Q8R2M2 758 aaKnown RBP29,65■■■□□ 2,34
Sh3rf1-201ENSMUST00000034060 Srpk2O54781 681 aaKnown RBP29,63■■■□□ 2,33
Sh3rf1-201ENSMUST00000034060 Zfp777B9EKF4 885 aa29,62■■■□□ 2,33
Sh3rf1-201ENSMUST00000034060 Dbr1Q923B1 550 aa29,62■■■□□ 2,33
Sh3rf1-201ENSMUST00000034060 Dnai1Q8C0M8 701 aa29,62■■■□□ 2,33
Sh3rf1-201ENSMUST00000034060 Neurod2Q62414 383 aa29,61■■■□□ 2,33
Sh3rf1-201ENSMUST00000034060 Grwd1Q810D6 446 aaKnown RBP29,6■■■□□ 2,33
Sh3rf1-201ENSMUST00000034060 Supt16hQ920B9 1047 aa29,58■■■□□ 2,33
Sh3rf1-201ENSMUST00000034060 Mroh3A0A1D5RM54 893 aa29,57■■■□□ 2,32
Sh3rf1-201ENSMUST00000034060 B4galnt3Q6L8S8 986 aa29,57■■■□□ 2,32
Sh3rf1-201ENSMUST00000034060 Rsf1E9PWW9 1441 aaKnown RBP29,56■■■□□ 2,32
Sh3rf1-201ENSMUST00000034060 PnnO35691 725 aaKnown RBP29,55■■■□□ 2,32
Sh3rf1-201ENSMUST00000034060 NacadQ5SWP3 1504 aa29,55■■■□□ 2,32
Sh3rf1-201ENSMUST00000034060 MccE9PWI3 1003 aa29,55■■■□□ 2,32
Sh3rf1-201ENSMUST00000034060 EspnQ9ET47 871 aa29,54■■■□□ 2,32
Sh3rf1-201ENSMUST00000034060 Mtus2Q3UHD3 1353 aa29,52■■■□□ 2,32
Sh3rf1-201ENSMUST00000034060 Iqcf3Q9D498 203 aa29,52■■■□□ 2,32
Sh3rf1-201ENSMUST00000034060 Gm20521D3Z5F7 333 aa29,51■■■□□ 2,32
Sh3rf1-201ENSMUST00000034060 Gm973E9Q295 1059 aa29,5■■■□□ 2,31
Sh3rf1-201ENSMUST00000034060 Spryd3E9Q9B3 442 aa29,5■■■□□ 2,31
Sh3rf1-201ENSMUST00000034060 Calcoco2A2A6M5 331 aa29,5■■■□□ 2,31
Sh3rf1-201ENSMUST00000034060 Rrp12Q6P5B0 1295 aaKnown RBP29,49■■■□□ 2,31
Sh3rf1-201ENSMUST00000034060 HnrnpuQ8VEK3 800 aaKnown RBP29,49■■■□□ 2,31
Sh3rf1-201ENSMUST00000034060 4933402E13RikQ9D4D2 429 aa29,49■■■□□ 2,31
Sh3rf1-201ENSMUST00000034060 Ccdc18Q640L5 1455 aa29,49■■■□□ 2,31
Sh3rf1-201ENSMUST00000034060 MsnP26041 577 aaKnown RBP29,48■■■□□ 2,31
Sh3rf1-201ENSMUST00000034060 Erich6bQ9D4S6 220 aa29,48■■■□□ 2,31
Sh3rf1-201ENSMUST00000034060 Kdm2aP59997 1161 aa29,48■■■□□ 2,31
Sh3rf1-201ENSMUST00000034060 Exosc9Q9JHI7 438 aaKnown RBP29,48■■■□□ 2,31
Sh3rf1-201ENSMUST00000034060 Chmp5Q9D7S9 219 aa29,46■■■□□ 2,31
Sh3rf1-201ENSMUST00000034060 Wwc2Q6NXJ0 1187 aa29,41■■■□□ 2,3
Sh3rf1-201ENSMUST00000034060 Gm6268A2A3U9 297 aa29,39■■■□□ 2,3
Sh3rf1-201ENSMUST00000034060 Kif15Q6P9L6 1387 aa29,38■■■□□ 2,29
Sh3rf1-201ENSMUST00000034060 Znf326O88291 580 aa29,38■■■□□ 2,29
Sh3rf1-201ENSMUST00000034060 Hsp90b1P08113 802 aaKnown RBP29,38■■■□□ 2,29
Sh3rf1-201ENSMUST00000034060 Armcx1Q9CX83 456 aa29,37■■■□□ 2,29
Sh3rf1-201ENSMUST00000034060 Slc4a3P16283 1227 aa29,37■■■□□ 2,29
Sh3rf1-201ENSMUST00000034060 Ipo8Q7TMY7 1010 aa29,36■■■□□ 2,29
Sh3rf1-201ENSMUST00000034060 Pes1Q9EQ61 584 aaKnown RBP29,35■■■□□ 2,29
Sh3rf1-201ENSMUST00000034060 Fhad1A6PWD2 1420 aa29,35■■■□□ 2,29
Sh3rf1-201ENSMUST00000034060 Hspa5P20029 655 aaKnown RBP29,31■■■□□ 2,28
Sh3rf1-201ENSMUST00000034060 Ddrgk1Q80WW9 315 aa29,31■■■□□ 2,28
Sh3rf1-201ENSMUST00000034060 Safb2Q80YR5 991 aaKnown RBP29,28■■■□□ 2,28
Sh3rf1-201ENSMUST00000034060 Mak16Q8BGS0 296 aaKnown RBP29,27■■■□□ 2,28
Sh3rf1-201ENSMUST00000034060 Zscan21Q07231 555 aa29,26■■■□□ 2,27
Sh3rf1-201ENSMUST00000034060 Pde3bQ61409 1100 aa29,25■■■□□ 2,27
Sh3rf1-201ENSMUST00000034060 Exoc6Q8R313 802 aa29,24■■■□□ 2,27
Sh3rf1-201ENSMUST00000034060 Stag3O70576 1240 aa29,23■■■□□ 2,27
Sh3rf1-201ENSMUST00000034060 Irx6Q9ER75 438 aa29,22■■■□□ 2,27
Sh3rf1-201ENSMUST00000034060 Znf316Q6PGE4 1016 aa29,21■■■□□ 2,27
Retrieved 100 of 22,080 RNA–protein pairs in 27,4 ms