RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Eid3Q3V124 375 aa13.81□□□□□ -0.2
Copb1-201ENSMUST00000033012 UacaQ8CGB3 1411 aa13.78□□□□□ -0.2
Copb1-201ENSMUST00000033012 Synj1Q8CHC4 1574 aa13.78□□□□□ -0.2
Copb1-201ENSMUST00000033012 Ccer2J3QPU5 274 aa13.78□□□□□ -0.2
Copb1-201ENSMUST00000033012 TchhA0A0B4J1F9 1599 aa13.77□□□□□ -0.2
Copb1-201ENSMUST00000033012 Smg6P61406 1418 aaKnown RBP13.77□□□□□ -0.21
Copb1-201ENSMUST00000033012 Clip1Q922J3 1391 aa13.76□□□□□ -0.21
Copb1-201ENSMUST00000033012 Plekhg3Q4VAC9 1341 aa13.76□□□□□ -0.21
Copb1-201ENSMUST00000033012 Gm13697A2AK42 830 aa13.74□□□□□ -0.21
Copb1-201ENSMUST00000033012 Iqcf3Q9D498 203 aa13.74□□□□□ -0.21
Copb1-201ENSMUST00000033012 Eif4g1Q6NZJ6 1600 aaKnown RBP13.73□□□□□ -0.21
Copb1-201ENSMUST00000033012 Top2aQ01320 1528 aaKnown RBP13.72□□□□□ -0.21
Copb1-201ENSMUST00000033012 Cc2d2aQ8CFW7 1633 aa13.71□□□□□ -0.21
Copb1-201ENSMUST00000033012 Baz1bQ9Z277 1479 aa13.71□□□□□ -0.22
Copb1-201ENSMUST00000033012 Myt1lP97500 1187 aa13.69□□□□□ -0.22
Copb1-201ENSMUST00000033012 NclP09405 707 aaKnown RBP13.68□□□□□ -0.22
Copb1-201ENSMUST00000033012 Pdcl3Q8BVF2 240 aa13.67□□□□□ -0.22
Copb1-201ENSMUST00000033012 4933416C03RikQ3V063 378 aa13.67□□□□□ -0.22
Copb1-201ENSMUST00000033012 Ncoa2Q61026 1462 aa13.67□□□□□ -0.22
Copb1-201ENSMUST00000033012 Cecr2E9Q2Z1 1453 aa13.66□□□□□ -0.22
Copb1-201ENSMUST00000033012 Camsap2Q8C1B1 1461 aa13.65□□□□□ -0.22
Copb1-201ENSMUST00000033012 NeflP08551 543 aa13.63□□□□□ -0.23
Copb1-201ENSMUST00000033012 Tcerg1Q8CGF7 1100 aaKnown RBP13.63□□□□□ -0.23
Copb1-201ENSMUST00000033012 AampJ3QN89 436 aa13.62□□□□□ -0.23
Copb1-201ENSMUST00000033012 Eif5bQ05D44 1216 aaKnown RBP13.62□□□□□ -0.23
Copb1-201ENSMUST00000033012 DaxxO35613 739 aa13.6□□□□□ -0.23
Copb1-201ENSMUST00000033012 Slc24a1Q91WD8 1130 aa13.6□□□□□ -0.23
Copb1-201ENSMUST00000033012 Gtf2a1Q99PM3 378 aa13.6□□□□□ -0.23
Copb1-201ENSMUST00000033012 Fmn1Q05860 1466 aa13.59□□□□□ -0.23
Copb1-201ENSMUST00000033012 Ccdc18Q640L5 1455 aa13.59□□□□□ -0.23
Copb1-201ENSMUST00000033012 CftrP26361 1476 aa13.58□□□□□ -0.23
Copb1-201ENSMUST00000033012 Zfp777B9EKF4 885 aa13.57□□□□□ -0.24
Copb1-201ENSMUST00000033012 Slc4a3P16283 1227 aa13.56□□□□□ -0.24
Copb1-201ENSMUST00000033012 Eea1Q8BL66 1411 aa13.56□□□□□ -0.24
Copb1-201ENSMUST00000033012 Ankrd36D3Z4K0 1415 aa13.56□□□□□ -0.24
Copb1-201ENSMUST00000033012 Sin3aQ60520 1274 aaKnown RBP13.55□□□□□ -0.24
Copb1-201ENSMUST00000033012 Arap1Q4LDD4 1452 aa13.55□□□□□ -0.24
Copb1-201ENSMUST00000033012 Arhgap27A2AB59 869 aa13.54□□□□□ -0.24
Copb1-201ENSMUST00000033012 Arhgef5E9Q7D5 1581 aa13.53□□□□□ -0.24
Copb1-201ENSMUST00000033012 P3h3Q8CG70 732 aa13.51□□□□□ -0.25
Copb1-201ENSMUST00000033012 Rrp9Q91WM3 475 aaKnown RBP13.51□□□□□ -0.25
Copb1-201ENSMUST00000033012 DmtnQ9WV69 405 aa13.51□□□□□ -0.25
Copb1-201ENSMUST00000033012 Cttnbp2B9EJA2 1648 aa13.5□□□□□ -0.25
Copb1-201ENSMUST00000033012 Esf1Q3V1V3 845 aaKnown RBP13.5□□□□□ -0.25
Copb1-201ENSMUST00000033012 Smarca4Q3TKT4 1613 aaKnown RBP13.5□□□□□ -0.25
Copb1-201ENSMUST00000033012 Rtn4Q99P72 1162 aaKnown RBP13.49□□□□□ -0.25
Copb1-201ENSMUST00000033012 ChgaP26339 463 aaKnown RBP13.49□□□□□ -0.25
Copb1-201ENSMUST00000033012 Slc4a2P13808 1237 aaKnown RBP13.47□□□□□ -0.25
Copb1-201ENSMUST00000033012 Fyco1Q8VDC1 1437 aa13.47□□□□□ -0.25
Copb1-201ENSMUST00000033012 Pprc1Q6NZN1 1644 aa13.47□□□□□ -0.25
Copb1-201ENSMUST00000033012 Mink1Q9JM52 1308 aa13.47□□□□□ -0.25
Copb1-201ENSMUST00000033012 NgefQ8CHT1 710 aa13.47□□□□□ -0.25
Copb1-201ENSMUST00000033012 Dnttip2Q8R2M2 758 aaKnown RBP13.47□□□□□ -0.25
Copb1-201ENSMUST00000033012 Mrs2Q5NCE8 434 aa13.46□□□□□ -0.25
Copb1-201ENSMUST00000033012 Sycp2Q9CUU3 1500 aa13.46□□□□□ -0.25
Copb1-201ENSMUST00000033012 Pdlim2Q8R1G6 349 aa13.45□□□□□ -0.26
Copb1-201ENSMUST00000033012 Tiam1Q60610 1591 aa13.44□□□□□ -0.26
Copb1-201ENSMUST00000033012 Hspa5P20029 655 aaKnown RBP13.44□□□□□ -0.26
Copb1-201ENSMUST00000033012 CatipB9EKE5 520 aa13.44□□□□□ -0.26
Copb1-201ENSMUST00000033012 EprsQ8CGC7 1512 aaKnown RBP13.43□□□□□ -0.26
Copb1-201ENSMUST00000033012 AU015836B2RUM3 263 aa13.43□□□□□ -0.26
Copb1-201ENSMUST00000033012 Gtf3c5Q8R2T8 520 aa13.42□□□□□ -0.26
Copb1-201ENSMUST00000033012 BccipQ9CWI3 316 aa13.42□□□□□ -0.26
Copb1-201ENSMUST00000033012 Npm2Q80W85 207 aa13.42□□□□□ -0.26
Copb1-201ENSMUST00000033012 Gm13695A2AK44 830 aa13.41□□□□□ -0.26
Copb1-201ENSMUST00000033012 Nkx1-2P42580 305 aa13.41□□□□□ -0.26
Copb1-201ENSMUST00000033012 Kcnh8P59111 1102 aa13.41□□□□□ -0.26
Copb1-201ENSMUST00000033012 Naip5Q9R016 1403 aa13.4□□□□□ -0.26
Copb1-201ENSMUST00000033012 Arhgap35Q91YM2 1499 aa13.39□□□□□ -0.27
Copb1-201ENSMUST00000033012 Dhx29Q6PGC1 1365 aaKnown RBP13.39□□□□□ -0.27
Copb1-201ENSMUST00000033012 Fhad1A6PWD2 1420 aa13.38□□□□□ -0.27
Copb1-201ENSMUST00000033012 Taok2Q6ZQ29 1240 aa13.38□□□□□ -0.27
Copb1-201ENSMUST00000033012 Mre11Q61216 706 aa13.36□□□□□ -0.27
Copb1-201ENSMUST00000033012 PnisrA2AJT4 805 aaKnown RBP13.36□□□□□ -0.27
Copb1-201ENSMUST00000033012 L3mbtl2P59178 703 aa13.36□□□□□ -0.27
Copb1-201ENSMUST00000033012 Znf692Q3U381 531 aa13.35□□□□□ -0.27
Copb1-201ENSMUST00000033012 Efcab5A0JP43 1406 aa13.35□□□□□ -0.27
Copb1-201ENSMUST00000033012 Thoc2B1AZI6 1594 aaKnown RBP13.35□□□□□ -0.27
Copb1-201ENSMUST00000033012 Sart3Q9JLI8 962 aaKnown RBP13.34□□□□□ -0.27
Copb1-201ENSMUST00000033012 Cul7Q8VE73 1689 aa13.34□□□□□ -0.27
Copb1-201ENSMUST00000033012 Exoc6Q8R313 802 aa13.33□□□□□ -0.28
Copb1-201ENSMUST00000033012 Ncoa1P70365 1447 aa13.33□□□□□ -0.28
Copb1-201ENSMUST00000033012 Vps8Q0P5W1 1427 aa13.33□□□□□ -0.28
Copb1-201ENSMUST00000033012 CanxP35564 591 aaKnown RBP13.32□□□□□ -0.28
Copb1-201ENSMUST00000033012 TnikP83510 1323 aa13.32□□□□□ -0.28
Copb1-201ENSMUST00000033012 Znf316Q6PGE4 1016 aa13.32□□□□□ -0.28
Copb1-201ENSMUST00000033012 Wwc2Q6NXJ0 1187 aa13.31□□□□□ -0.28
Copb1-201ENSMUST00000033012 Naip1Q9QWK5 1403 aa13.31□□□□□ -0.28
Copb1-201ENSMUST00000033012 Crocc2F6XLV1 1638 aa13.31□□□□□ -0.28
Copb1-201ENSMUST00000033012 Scaf1Q5U4C3 1256 aaKnown RBP13.31□□□□□ -0.28
Copb1-201ENSMUST00000033012 Mia2Q91ZV0 1396 aa13.31□□□□□ -0.28
Copb1-201ENSMUST00000033012 Setd5Q5XJV7 1441 aa13.31□□□□□ -0.28
Copb1-201ENSMUST00000033012 Ofd1Q80Z25 1017 aa13.3□□□□□ -0.28
Copb1-201ENSMUST00000033012 Camsap1A2AHC3 1581 aa13.3□□□□□ -0.28
Copb1-201ENSMUST00000033012 CntlnA2AM05 1397 aa13.28□□□□□ -0.28
Copb1-201ENSMUST00000033012 Prkrip1Q9CWV6 186 aaKnown RBP13.28□□□□□ -0.28
Copb1-201ENSMUST00000033012 Mroh3A0A1D5RM54 893 aa13.28□□□□□ -0.28
Copb1-201ENSMUST00000033012 Kif20aP97329 887 aa13.28□□□□□ -0.28
Copb1-201ENSMUST00000033012 Erich3F6QRE9 1637 aa13.28□□□□□ -0.28
Copb1-201ENSMUST00000033012 Kank1E9Q238 1360 aa13.27□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms