RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Erich6D3Z6S9 713 aa14.56□□□□□ -0.08
Ciita-201ENSMUST00000023147 Cep162Q6ZQ06 1403 aa14.55□□□□□ -0.08
Ciita-201ENSMUST00000023147 Upf2A2AT37 1269 aaKnown RBP14.54□□□□□ -0.08
Ciita-201ENSMUST00000023147 Ccdc9Q8VC31 543 aaKnown RBP14.53□□□□□ -0.08
Ciita-201ENSMUST00000023147 Eea1Q8BL66 1411 aa14.53□□□□□ -0.08
Ciita-201ENSMUST00000023147 Hsp90aa1P07901 733 aaKnown RBP14.51□□□□□ -0.09
Ciita-201ENSMUST00000023147 Lmod2Q3UHZ5 550 aa14.51□□□□□ -0.09
Ciita-201ENSMUST00000023147 Ifnlr1Q8CGK5 535 aa14.5□□□□□ -0.09
Ciita-201ENSMUST00000023147 Fam71e1A1L3C1 212 aa14.5□□□□□ -0.09
Ciita-201ENSMUST00000023147 Setd5Q5XJV7 1441 aa14.5□□□□□ -0.09
Ciita-201ENSMUST00000023147 Zbtb4Q5F293 982 aa14.5□□□□□ -0.09
Ciita-201ENSMUST00000023147 Wdr43Q6ZQL4 677 aaKnown RBP14.49□□□□□ -0.09
Ciita-201ENSMUST00000023147 Prdm10Q3UTQ7 1184 aa14.48□□□□□ -0.09
Ciita-201ENSMUST00000023147 Cttnbp2B9EJA2 1648 aa14.48□□□□□ -0.09
Ciita-201ENSMUST00000023147 Pds5bQ4VA53 1446 aaKnown RBP14.47□□□□□ -0.09
Ciita-201ENSMUST00000023147 Mapk8ip2Q9ERE9 830 aa14.46□□□□□ -0.09
Ciita-201ENSMUST00000023147 BlmO88700 1416 aa14.45□□□□□ -0.1
Ciita-201ENSMUST00000023147 Rapgef2Q8CHG7 1496 aa14.45□□□□□ -0.1
Ciita-201ENSMUST00000023147 Kif15Q6P9L6 1387 aa14.45□□□□□ -0.1
Ciita-201ENSMUST00000023147 Ppp4r2Q0VGB7 417 aa14.43□□□□□ -0.1
Ciita-201ENSMUST00000023147 ArxO35085 564 aa14.43□□□□□ -0.1
Ciita-201ENSMUST00000023147 Smarca4Q3TKT4 1613 aaKnown RBP14.38□□□□□ -0.11
Ciita-201ENSMUST00000023147 Ccdc18Q640L5 1455 aa14.37□□□□□ -0.11
Ciita-201ENSMUST00000023147 Ythdc1E9Q5K9 736 aaKnown RBP14.36□□□□□ -0.11
Ciita-201ENSMUST00000023147 Mia2Q91ZV0 1396 aa14.34□□□□□ -0.11
Ciita-201ENSMUST00000023147 Mrs2Q5NCE8 434 aa14.33□□□□□ -0.12
Ciita-201ENSMUST00000023147 Bcl11aQ9QYE3 773 aa14.31□□□□□ -0.12
Ciita-201ENSMUST00000023147 Znf326O88291 580 aa14.29□□□□□ -0.12
Ciita-201ENSMUST00000023147 Plppr3Q7TPB0 716 aa14.28□□□□□ -0.12
Ciita-201ENSMUST00000023147 Lmod3E9QA62 571 aa14.28□□□□□ -0.12
Ciita-201ENSMUST00000023147 Ccdc27Q3V036 639 aa14.25□□□□□ -0.13
Ciita-201ENSMUST00000023147 Fgd1P52734 960 aa14.25□□□□□ -0.13
Ciita-201ENSMUST00000023147 Top2aQ01320 1528 aaKnown RBP14.25□□□□□ -0.13
Ciita-201ENSMUST00000023147 Fkbp15Q6P9Q6 1216 aaKnown RBP14.23□□□□□ -0.13
Ciita-201ENSMUST00000023147 SafbD3YXK2 937 aaKnown RBP14.23□□□□□ -0.13
Ciita-201ENSMUST00000023147 Rangap1P46061 589 aaKnown RBP14.23□□□□□ -0.13
Ciita-201ENSMUST00000023147 Atad2bE9Q166 1460 aaKnown RBP14.23□□□□□ -0.13
Ciita-201ENSMUST00000023147 Baz1bQ9Z277 1479 aa14.23□□□□□ -0.13
Ciita-201ENSMUST00000023147 Top2bQ64511 1612 aa14.22□□□□□ -0.13
Ciita-201ENSMUST00000023147 DekQ7TNV0 380 aaKnown RBP14.2□□□□□ -0.14
Ciita-201ENSMUST00000023147 Cc2d2aQ8CFW7 1633 aa14.19□□□□□ -0.14
Ciita-201ENSMUST00000023147 Trim44Q9QXA7 346 aa14.19□□□□□ -0.14
Ciita-201ENSMUST00000023147 Safb2Q80YR5 991 aaKnown RBP14.17□□□□□ -0.14
Ciita-201ENSMUST00000023147 Cwc22Q8C5N3 908 aaKnown RBP14.16□□□□□ -0.14
Ciita-201ENSMUST00000023147 Clstn2Q9ER65 966 aa14.16□□□□□ -0.14
Ciita-201ENSMUST00000023147 Chic2Q9D9G3 165 aa14.14□□□□□ -0.15
Ciita-201ENSMUST00000023147 Arhgap35Q91YM2 1499 aa14.13□□□□□ -0.15
Ciita-201ENSMUST00000023147 CntlnA2AM05 1397 aa14.13□□□□□ -0.15
Ciita-201ENSMUST00000023147 Fyco1Q8VDC1 1437 aa14.12□□□□□ -0.15
Ciita-201ENSMUST00000023147 Iqgap2Q3UQ44 1575 aa14.12□□□□□ -0.15
Ciita-201ENSMUST00000023147 Ofd1Q80Z25 1017 aa14.12□□□□□ -0.15
Ciita-201ENSMUST00000023147 Rad21Q61550 635 aaKnown RBP14.11□□□□□ -0.15
Ciita-201ENSMUST00000023147 Vsig10D3YX43 558 aa14.08□□□□□ -0.15
Ciita-201ENSMUST00000023147 Supt16hQ920B9 1047 aa14.07□□□□□ -0.16
Ciita-201ENSMUST00000023147 Hspa5P20029 655 aaKnown RBP14.06□□□□□ -0.16
Ciita-201ENSMUST00000023147 PnnO35691 725 aaKnown RBP14.06□□□□□ -0.16
Ciita-201ENSMUST00000023147 Ncapd3Q6ZQK0 1506 aa14.05□□□□□ -0.16
Ciita-201ENSMUST00000023147 Tcerg1Q8CGF7 1100 aaKnown RBP14.04□□□□□ -0.16
Ciita-201ENSMUST00000023147 Phldb1Q6PDH0 1371 aaKnown RBP14.04□□□□□ -0.16
Ciita-201ENSMUST00000023147 BicraF8VPZ9 1578 aa14.03□□□□□ -0.16
Ciita-201ENSMUST00000023147 Carmil1Q6EDY6 1374 aa14.03□□□□□ -0.16
Ciita-201ENSMUST00000023147 Ankrd36D3Z4K0 1415 aa14□□□□□ -0.17
Ciita-201ENSMUST00000023147 Mbd3Q9Z2D8 285 aaKnown RBP14□□□□□ -0.17
Ciita-201ENSMUST00000023147 Smg6P61406 1418 aaKnown RBP14□□□□□ -0.17
Ciita-201ENSMUST00000023147 CanxP35564 591 aaKnown RBP13.99□□□□□ -0.17
Ciita-201ENSMUST00000023147 Map3k1P53349 1493 aa13.99□□□□□ -0.17
Ciita-201ENSMUST00000023147 Shroom4Q1W617 1475 aa13.99□□□□□ -0.17
Ciita-201ENSMUST00000023147 Cux2P70298 1426 aa13.99□□□□□ -0.17
Ciita-201ENSMUST00000023147 PtmaP26350 111 aa13.99□□□□□ -0.17
Ciita-201ENSMUST00000023147 Irx3P81067 507 aa13.99□□□□□ -0.17
Ciita-201ENSMUST00000023147 Ipo9Q91YE6 1041 aa13.98□□□□□ -0.17
Ciita-201ENSMUST00000023147 P3h3Q8CG70 732 aa13.97□□□□□ -0.17
Ciita-201ENSMUST00000023147 Trim30dE9PWL0 497 aa13.97□□□□□ -0.17
Ciita-201ENSMUST00000023147 Hsp90ab1P11499 724 aaKnown RBP13.97□□□□□ -0.17
Ciita-201ENSMUST00000023147 Ppm1gQ61074 542 aa13.96□□□□□ -0.17
Ciita-201ENSMUST00000023147 Aebp1Q640N1 1128 aa13.96□□□□□ -0.17
Ciita-201ENSMUST00000023147 NrkQ9R0G8 1455 aa13.96□□□□□ -0.17
Ciita-201ENSMUST00000023147 Zfp777B9EKF4 885 aa13.94□□□□□ -0.18
Ciita-201ENSMUST00000023147 Card11Q8CIS0 1159 aa13.94□□□□□ -0.18
Ciita-201ENSMUST00000023147 Arhgap27A2AB59 869 aa13.94□□□□□ -0.18
Ciita-201ENSMUST00000023147 Rgl3Q3UYI5 709 aa13.94□□□□□ -0.18
Ciita-201ENSMUST00000023147 Trim26Q99PN3 545 aa13.93□□□□□ -0.18
Ciita-201ENSMUST00000023147 Nolc1E9Q5C9 702 aaKnown RBP13.93□□□□□ -0.18
Ciita-201ENSMUST00000023147 Rpap1Q80TE0 1409 aa13.93□□□□□ -0.18
Ciita-201ENSMUST00000023147 Htatsf1Q8BGC0 757 aa13.92□□□□□ -0.18
Ciita-201ENSMUST00000023147 Irx6Q9ER75 438 aa13.92□□□□□ -0.18
Ciita-201ENSMUST00000023147 Arhgef5E9Q7D5 1581 aa13.92□□□□□ -0.18
Ciita-201ENSMUST00000023147 Fhad1A6PWD2 1420 aa13.92□□□□□ -0.18
Ciita-201ENSMUST00000023147 Arap1Q4LDD4 1452 aa13.91□□□□□ -0.18
Ciita-201ENSMUST00000023147 Znf710Q3U288 666 aa13.91□□□□□ -0.18
Ciita-201ENSMUST00000023147 Pes1Q9EQ61 584 aaKnown RBP13.91□□□□□ -0.18
Ciita-201ENSMUST00000023147 Mtus2Q3UHD3 1353 aa13.91□□□□□ -0.18
Ciita-201ENSMUST00000023147 Adam1bQ8R534 806 aa13.91□□□□□ -0.18
Ciita-201ENSMUST00000023147 Chmp4bQ9D8B3 224 aaKnown RBP13.9□□□□□ -0.18
Ciita-201ENSMUST00000023147 Kif27Q7M6Z4 1394 aa13.9□□□□□ -0.18
Ciita-201ENSMUST00000023147 Wwc2Q6NXJ0 1187 aa13.9□□□□□ -0.18
Ciita-201ENSMUST00000023147 UacaQ8CGB3 1411 aa13.9□□□□□ -0.18
Ciita-201ENSMUST00000023147 Exoc6Q8R313 802 aa13.88□□□□□ -0.19
Ciita-201ENSMUST00000023147 IqubQ8CDK3 788 aa13.88□□□□□ -0.19
Ciita-201ENSMUST00000023147 Cux1P53564 1515 aa13.87□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 10.3 ms