RNA–Protein interactions for RNA: ENSMUST00000002412.8

Ncan-201, Transcript of Neurocan core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncan, Length 7,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncan-201ENSMUST00000002412 Plcb2A3KGF7 1181 aa16.75■□□□□ 0.27
Ncan-201ENSMUST00000002412 Plppr3Q7TPB0 716 aa16.74■□□□□ 0.27
Ncan-201ENSMUST00000002412 Irx6Q9ER75 438 aa16.7■□□□□ 0.26
Ncan-201ENSMUST00000002412 Fgd1P52734 960 aa16.69■□□□□ 0.26
Ncan-201ENSMUST00000002412 Trim30dE9PWL0 497 aa16.69■□□□□ 0.26
Ncan-201ENSMUST00000002412 BccipQ9CWI3 316 aa16.66■□□□□ 0.26
Ncan-201ENSMUST00000002412 Ccdc9Q8VC31 543 aaKnown RBP16.65■□□□□ 0.26
Ncan-201ENSMUST00000002412 Clstn1Q9EPL2 979 aa16.64■□□□□ 0.25
Ncan-201ENSMUST00000002412 1700123L14RikQ3V2K7 440 aa16.63■□□□□ 0.25
Ncan-201ENSMUST00000002412 Znf326O88291 580 aa16.61■□□□□ 0.25
Ncan-201ENSMUST00000002412 P3h3Q8CG70 732 aa16.6■□□□□ 0.25
Ncan-201ENSMUST00000002412 Mak16Q8BGS0 296 aaKnown RBP16.55■□□□□ 0.24
Ncan-201ENSMUST00000002412 Apbb1Q9QXJ1 710 aa16.52■□□□□ 0.23
Ncan-201ENSMUST00000002412 Dbr1Q923B1 550 aa16.49■□□□□ 0.23
Ncan-201ENSMUST00000002412 Erich6bQ9D4S6 220 aa16.49■□□□□ 0.23
Ncan-201ENSMUST00000002412 Mrs2Q5NCE8 434 aa16.48■□□□□ 0.23
Ncan-201ENSMUST00000002412 Ccdc27Q3V036 639 aa16.48■□□□□ 0.23
Ncan-201ENSMUST00000002412 Prm3Q62100 101 aa16.47■□□□□ 0.23
Ncan-201ENSMUST00000002412 Rtn4Q99P72 1162 aaKnown RBP16.46■□□□□ 0.23
Ncan-201ENSMUST00000002412 PnnO35691 725 aaKnown RBP16.46■□□□□ 0.23
Ncan-201ENSMUST00000002412 Armcx1Q9CX83 456 aa16.46■□□□□ 0.23
Ncan-201ENSMUST00000002412 Irx3P81067 507 aa16.45■□□□□ 0.22
Ncan-201ENSMUST00000002412 Fkbp15Q6P9Q6 1216 aaKnown RBP16.44■□□□□ 0.22
Ncan-201ENSMUST00000002412 Dnttip2Q8R2M2 758 aaKnown RBP16.42■□□□□ 0.22
Ncan-201ENSMUST00000002412 Casc1Q6TDU8 730 aa16.38■□□□□ 0.21
Ncan-201ENSMUST00000002412 Htatsf1Q8BGC0 757 aa16.38■□□□□ 0.21
Ncan-201ENSMUST00000002412 IbspQ61711 324 aa16.38■□□□□ 0.21
Ncan-201ENSMUST00000002412 Adam1bQ8R534 806 aa16.38■□□□□ 0.21
Ncan-201ENSMUST00000002412 Zcchc6Q5BLK4 1491 aaKnown RBP16.35■□□□□ 0.21
Ncan-201ENSMUST00000002412 Pcmtd1P59913 357 aa16.34■□□□□ 0.21
Ncan-201ENSMUST00000002412 B4galnt3Q6L8S8 986 aa16.33■□□□□ 0.21
Ncan-201ENSMUST00000002412 MsnP26041 577 aaKnown RBP16.31■□□□□ 0.2
Ncan-201ENSMUST00000002412 Slc4a1apE9PX68 744 aa16.3■□□□□ 0.2
Ncan-201ENSMUST00000002412 Slc4a3P16283 1227 aa16.28■□□□□ 0.2
Ncan-201ENSMUST00000002412 SetQ9EQU5 289 aaKnown RBP16.28■□□□□ 0.2
Ncan-201ENSMUST00000002412 AU015836B2RUM3 263 aa16.28■□□□□ 0.2
Ncan-201ENSMUST00000002412 Gpatch11Q3UFS4 262 aa16.27■□□□□ 0.2
Ncan-201ENSMUST00000002412 Pes1Q9EQ61 584 aaKnown RBP16.27■□□□□ 0.2
Ncan-201ENSMUST00000002412 Neurod2Q62414 383 aa16.27■□□□□ 0.19
Ncan-201ENSMUST00000002412 SafbD3YXK2 937 aaKnown RBP16.25■□□□□ 0.19
Ncan-201ENSMUST00000002412 Dcaf1Q80TR8 1506 aa16.24■□□□□ 0.19
Ncan-201ENSMUST00000002412 Ubap1lG3UW59 384 aa16.23■□□□□ 0.19
Ncan-201ENSMUST00000002412 Kiaa0754Q69ZZ9 979 aa16.22■□□□□ 0.19
Ncan-201ENSMUST00000002412 Ofd1Q80Z25 1017 aa16.22■□□□□ 0.19
Ncan-201ENSMUST00000002412 Chic2Q9D9G3 165 aa16.21■□□□□ 0.19
Ncan-201ENSMUST00000002412 Calcoco2A2A6M5 331 aa16.2■□□□□ 0.18
Ncan-201ENSMUST00000002412 Samd1D3YXK1 519 aa16.2■□□□□ 0.18
Ncan-201ENSMUST00000002412 Noc3lQ8VI84 807 aaKnown RBP16.2■□□□□ 0.18
Ncan-201ENSMUST00000002412 Mical1Q8VDP3 1048 aa16.18■□□□□ 0.18
Ncan-201ENSMUST00000002412 Arid4aF8VPQ2 1261 aaKnown RBP16.18■□□□□ 0.18
Ncan-201ENSMUST00000002412 Anapc15P60007 132 aa16.16■□□□□ 0.18
Ncan-201ENSMUST00000002412 Ppm1gQ61074 542 aa16.15■□□□□ 0.18
Ncan-201ENSMUST00000002412 Hdac5Q9Z2V6 1113 aa16.15■□□□□ 0.18
Ncan-201ENSMUST00000002412 Gm6268A2A3U9 297 aa16.15■□□□□ 0.18
Ncan-201ENSMUST00000002412 Sh3bp5Q9Z131 463 aa16.15■□□□□ 0.18
Ncan-201ENSMUST00000002412 Hsp90b1P08113 802 aaKnown RBP16.14■□□□□ 0.17
Ncan-201ENSMUST00000002412 1700019A02RikA0A087WPV9 146 aa16.12■□□□□ 0.17
Ncan-201ENSMUST00000002412 Ecm2Q5FW85 670 aa16.12■□□□□ 0.17
Ncan-201ENSMUST00000002412 Aebp2Q9Z248 504 aaKnown RBP16.1■□□□□ 0.17
Ncan-201ENSMUST00000002412 Ftsj3Q9DBE9 838 aaKnown RBP16.09■□□□□ 0.17
Ncan-201ENSMUST00000002412 Npm1Q61937 292 aaKnown RBP16.07■□□□□ 0.16
Ncan-201ENSMUST00000002412 Pknox2Q8BG99 474 aa16.07■□□□□ 0.16
Ncan-201ENSMUST00000002412 CgnP59242 1191 aa16.06■□□□□ 0.16
Ncan-201ENSMUST00000002412 Isy1Q69ZQ2 285 aaKnown RBP16.06■□□□□ 0.16
Ncan-201ENSMUST00000002412 Map7d2A2AG50 781 aa16.04■□□□□ 0.16
Ncan-201ENSMUST00000002412 Ncbp3Q8BZR9 615 aaKnown RBP16.04■□□□□ 0.16
Ncan-201ENSMUST00000002412 Tomm22Q9CPQ3 142 aa16.04■□□□□ 0.16
Ncan-201ENSMUST00000002412 Rrp12Q6P5B0 1295 aaKnown RBP16.04■□□□□ 0.16
Ncan-201ENSMUST00000002412 Wwc2Q6NXJ0 1187 aa16.04■□□□□ 0.16
Ncan-201ENSMUST00000002412 Rassf8Q8CJ96 419 aa16.02■□□□□ 0.16
Ncan-201ENSMUST00000002412 Clip1Q922J3 1391 aa16.01■□□□□ 0.15
Ncan-201ENSMUST00000002412 SlkO54988 1233 aa16.01■□□□□ 0.15
Ncan-201ENSMUST00000002412 Map7O88735 730 aa16.01■□□□□ 0.15
Ncan-201ENSMUST00000002412 Gm973E9Q295 1059 aa16■□□□□ 0.15
Ncan-201ENSMUST00000002412 Rgl3Q3UYI5 709 aa15.99■□□□□ 0.15
Ncan-201ENSMUST00000002412 Fbxo2Q80UW2 297 aa15.99■□□□□ 0.15
Ncan-201ENSMUST00000002412 Trim30aP15533 496 aa15.98■□□□□ 0.15
Ncan-201ENSMUST00000002412 NgefQ8CHT1 710 aa15.98■□□□□ 0.15
Ncan-201ENSMUST00000002412 Safb2Q80YR5 991 aaKnown RBP15.97■□□□□ 0.15
Ncan-201ENSMUST00000002412 Ipo4Q8VI75 1082 aa15.97■□□□□ 0.15
Ncan-201ENSMUST00000002412 Mex3cQ05A36 652 aaKnown RBP15.97■□□□□ 0.15
Ncan-201ENSMUST00000002412 CrebrfQ8CDG5 640 aaKnown RBP15.97■□□□□ 0.15
Ncan-201ENSMUST00000002412 RdxP26043 583 aaKnown RBP15.95■□□□□ 0.14
Ncan-201ENSMUST00000002412 Fam193aQ8CGI1 1231 aaKnown RBP15.95■□□□□ 0.14
Ncan-201ENSMUST00000002412 Gtf3c3Q3TMP1 882 aa15.95■□□□□ 0.14
Ncan-201ENSMUST00000002412 Kdm2aP59997 1161 aa15.94■□□□□ 0.14
Ncan-201ENSMUST00000002412 PrkcshO08795 521 aa15.93■□□□□ 0.14
Ncan-201ENSMUST00000002412 MccE9PWI3 1003 aa15.92■□□□□ 0.14
Ncan-201ENSMUST00000002412 Drc7Q6V3W6 876 aa15.92■□□□□ 0.14
Ncan-201ENSMUST00000002412 Cald1E9QA15 768 aaKnown RBP15.92■□□□□ 0.14
Ncan-201ENSMUST00000002412 Grwd1Q810D6 446 aaKnown RBP15.91■□□□□ 0.14
Ncan-201ENSMUST00000002412 Mapk8ip3Q9ESN9 1337 aa15.9■□□□□ 0.14
Ncan-201ENSMUST00000002412 Ccer2J3QPU5 274 aa15.9■□□□□ 0.14
Ncan-201ENSMUST00000002412 Supt16hQ920B9 1047 aa15.89■□□□□ 0.13
Ncan-201ENSMUST00000002412 BbxQ8VBW5 907 aa15.89■□□□□ 0.13
Ncan-201ENSMUST00000002412 Becn1O88597 448 aa15.88■□□□□ 0.13
Ncan-201ENSMUST00000002412 Dnai1Q8C0M8 701 aa15.87■□□□□ 0.13
Ncan-201ENSMUST00000002412 Rsph6aQ8CDR2 708 aa15.87■□□□□ 0.13
Ncan-201ENSMUST00000002412 Gm35339A0A140LHH9 1649 aa15.86■□□□□ 0.13
Ncan-201ENSMUST00000002412 Iffo2Q8R2V2 512 aa15.86■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms