RNA–Protein interactions for RNA: ENSMUST00000000476.14

Pdgfra-201, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-201ENSMUST00000000476 Wdr43Q6ZQL4 677 aaKnown RBP12.25□□□□□ -0.45
Pdgfra-201ENSMUST00000000476 Setd5Q5XJV7 1441 aa12.24□□□□□ -0.45
Pdgfra-201ENSMUST00000000476 Fgd1P52734 960 aa12.23□□□□□ -0.45
Pdgfra-201ENSMUST00000000476 Hsp90aa1P07901 733 aaKnown RBP12.22□□□□□ -0.45
Pdgfra-201ENSMUST00000000476 P3h3Q8CG70 732 aa12.2□□□□□ -0.46
Pdgfra-201ENSMUST00000000476 Rgl3Q3UYI5 709 aa12.19□□□□□ -0.46
Pdgfra-201ENSMUST00000000476 CatipB9EKE5 520 aa12.18□□□□□ -0.46
Pdgfra-201ENSMUST00000000476 DekQ7TNV0 380 aaKnown RBP12.18□□□□□ -0.46
Pdgfra-201ENSMUST00000000476 Trim26Q99PN3 545 aa12.18□□□□□ -0.46
Pdgfra-201ENSMUST00000000476 NacadQ5SWP3 1504 aa12.15□□□□□ -0.46
Pdgfra-201ENSMUST00000000476 Kif15Q6P9L6 1387 aa12.13□□□□□ -0.47
Pdgfra-201ENSMUST00000000476 Rsf1E9PWW9 1441 aaKnown RBP12.13□□□□□ -0.47
Pdgfra-201ENSMUST00000000476 Vsig10D3YX43 558 aa12.13□□□□□ -0.47
Pdgfra-201ENSMUST00000000476 Golga3P55937 1487 aa12.11□□□□□ -0.47
Pdgfra-201ENSMUST00000000476 Hsp90ab1P11499 724 aaKnown RBP12.11□□□□□ -0.47
Pdgfra-201ENSMUST00000000476 IqubQ8CDK3 788 aa12.11□□□□□ -0.47
Pdgfra-201ENSMUST00000000476 Ofd1Q80Z25 1017 aa12.08□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Ercc6F8VPZ5 1481 aa12.08□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Ccdc18Q640L5 1455 aa12.08□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Baz1aO88379 1555 aa12.08□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Trim30dE9PWL0 497 aa12.07□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Eea1Q8BL66 1411 aa12.07□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 CanxP35564 591 aaKnown RBP12.07□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Srpk2O54781 681 aaKnown RBP12.07□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Kdm2aP59997 1161 aa12.07□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Irx6Q9ER75 438 aa12.07□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Grwd1Q810D6 446 aaKnown RBP12.06□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Arhgap27A2AB59 869 aa12.06□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Ythdc1E9Q5K9 736 aaKnown RBP12.05□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Card11Q8CIS0 1159 aa12.05□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Trim44Q9QXA7 346 aa12.04□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Mroh3A0A1D5RM54 893 aa12.03□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Aebp2Q9Z248 504 aaKnown RBP12.03□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Lmod3E9QA62 571 aa12.03□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Ccdc9Q8VC31 543 aaKnown RBP12.03□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Exosc9Q9JHI7 438 aaKnown RBP12.02□□□□□ -0.48
Pdgfra-201ENSMUST00000000476 Gm20521D3Z5F7 333 aa12.02□□□□□ -0.49
Pdgfra-201ENSMUST00000000476 Cwc22Q8C5N3 908 aaKnown RBP12.01□□□□□ -0.49
Pdgfra-201ENSMUST00000000476 Mtus2Q3UHD3 1353 aa12□□□□□ -0.49
Pdgfra-201ENSMUST00000000476 Mapk8ip3Q9ESN9 1337 aa12□□□□□ -0.49
Pdgfra-201ENSMUST00000000476 Apbb1Q9QXJ1 710 aa12□□□□□ -0.49
Pdgfra-201ENSMUST00000000476 Arid4bA2CG63 1314 aaKnown RBP11.99□□□□□ -0.49
Pdgfra-201ENSMUST00000000476 PtmaP26350 111 aa11.98□□□□□ -0.49
Pdgfra-201ENSMUST00000000476 Rrp7aQ9D1C9 280 aaKnown RBP11.98□□□□□ -0.49
Pdgfra-201ENSMUST00000000476 Neurod2Q62414 383 aa11.97□□□□□ -0.49
Pdgfra-201ENSMUST00000000476 Znf326O88291 580 aa11.95□□□□□ -0.5
Pdgfra-201ENSMUST00000000476 Stag3O70576 1240 aa11.94□□□□□ -0.5
Pdgfra-201ENSMUST00000000476 Stk24Q99KH8 431 aa11.94□□□□□ -0.5
Pdgfra-201ENSMUST00000000476 Mia2Q91ZV0 1396 aa11.94□□□□□ -0.5
Pdgfra-201ENSMUST00000000476 Plcb2A3KGF7 1181 aa11.93□□□□□ -0.5
Pdgfra-201ENSMUST00000000476 Fam71e1A1L3C1 212 aa11.92□□□□□ -0.5
Pdgfra-201ENSMUST00000000476 Htatsf1Q8BGC0 757 aa11.92□□□□□ -0.5
Pdgfra-201ENSMUST00000000476 Gm6268A2A3U9 297 aa11.91□□□□□ -0.5
Pdgfra-201ENSMUST00000000476 NgefQ8CHT1 710 aa11.91□□□□□ -0.5
Pdgfra-201ENSMUST00000000476 Chmp4bQ9D8B3 224 aaKnown RBP11.91□□□□□ -0.5
Pdgfra-201ENSMUST00000000476 Iqcf3Q9D498 203 aa11.9□□□□□ -0.51
Pdgfra-201ENSMUST00000000476 Map7O88735 730 aa11.89□□□□□ -0.51
Pdgfra-201ENSMUST00000000476 NudcO35685 332 aaKnown RBP11.89□□□□□ -0.51
Pdgfra-201ENSMUST00000000476 Ppm1gQ61074 542 aa11.88□□□□□ -0.51
Pdgfra-201ENSMUST00000000476 Dbr1Q923B1 550 aa11.87□□□□□ -0.51
Pdgfra-201ENSMUST00000000476 Armcx1Q9CX83 456 aa11.87□□□□□ -0.51
Pdgfra-201ENSMUST00000000476 Rtn4Q99P72 1162 aaKnown RBP11.86□□□□□ -0.51
Pdgfra-201ENSMUST00000000476 Zfp777B9EKF4 885 aa11.86□□□□□ -0.51
Pdgfra-201ENSMUST00000000476 1700123L14RikQ3V2K7 440 aa11.86□□□□□ -0.51
Pdgfra-201ENSMUST00000000476 Cnga1P29974 684 aa11.85□□□□□ -0.51
Pdgfra-201ENSMUST00000000476 Ccdc27Q3V036 639 aa11.85□□□□□ -0.51
Pdgfra-201ENSMUST00000000476 MyclP10166 368 aa11.85□□□□□ -0.51
Pdgfra-201ENSMUST00000000476 1700019A02RikA0A087WPV9 146 aa11.84□□□□□ -0.51
Pdgfra-201ENSMUST00000000476 PnnO35691 725 aaKnown RBP11.82□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 Pes1Q9EQ61 584 aaKnown RBP11.82□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 B4galnt3Q6L8S8 986 aa11.81□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 Hsp90b1P08113 802 aaKnown RBP11.81□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 Mbd3Q9Z2D8 285 aaKnown RBP11.81□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 Hspa5P20029 655 aaKnown RBP11.81□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 Kdm5dQ62240 1548 aa11.8□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 Fhad1A6PWD2 1420 aa11.8□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 Kif27Q7M6Z4 1394 aa11.8□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 Clstn1Q9EPL2 979 aa11.79□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 Casc1Q6TDU8 730 aa11.79□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 Rwdd1Q9CQK7 243 aa11.78□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 KnstrnQ9D9Z1 312 aaKnown RBP11.78□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 Map4P27546 1125 aaKnown RBP11.78□□□□□ -0.52
Pdgfra-201ENSMUST00000000476 Rundc1Q0VDN7 615 aa11.77□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 MccE9PWI3 1003 aa11.76□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Wwc2Q6NXJ0 1187 aa11.76□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Pkd2O35245 966 aa11.76□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 HnrnpuQ8VEK3 800 aaKnown RBP11.75□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Sh3bp5Q9Z131 463 aa11.74□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Spryd3E9Q9B3 442 aa11.73□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Ppp1r18Q8BQ30 594 aa11.73□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Rtf1A2AQ19 715 aaKnown RBP11.73□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Fmn1Q05860 1466 aa11.73□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Ifit1bl1D3Z6F0 470 aa11.72□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Adam1bQ8R534 806 aa11.72□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Gtf2e1Q9D0D5 440 aa11.72□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Speer4f1Q9D5Q6 258 aa11.72□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Cep162Q6ZQ06 1403 aa11.72□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Tmf1B9EKI3 1091 aa11.72□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 Fyco1Q8VDC1 1437 aa11.72□□□□□ -0.53
Pdgfra-201ENSMUST00000000476 SafbD3YXK2 937 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms