RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 SPAG11AQ6PDA7 123 aa0.45□□□□□ -2.34
TARDBP-220ENST00000618606 GTF2H5Q6ZYL4 71 aa0.45□□□□□ -2.34
TARDBP-220ENST00000618606 FAM213BQ8TBF2 198 aa0.45□□□□□ -2.34
TARDBP-220ENST00000618606 PRR15LQ9BU68 103 aa0.45□□□□□ -2.34
TARDBP-220ENST00000618606 CYP4F30PQ9H0H9 118 aa0.45□□□□□ -2.34
TARDBP-220ENST00000618606 DOCK1Q14185 1865 aa0.45□□□□□ -2.34
TARDBP-220ENST00000618606 NWD2Q9ULI1 1742 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 GOLGA3Q08378 1498 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 G3V318 75 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 M0R135 149 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 GCHFRP30047 84 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 SNCAP37840 140 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 SPINK7P58062 85 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 GNG11P61952 73 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 BAGE3Q86Y29 109 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 TCEAL7Q9BRU2 100 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 NDUFA4L2Q9NRX3 87 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 R4GMQ9 66 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 V9GYH0 126 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 KDM6BO15054 1643 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 ZNF462Q96JM2 2506 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 C10orf71Q711Q0 1435 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 ABCA1O95477 2261 aa0.44□□□□□ -2.34
TARDBP-220ENST00000618606 CDK13Q14004 1512 aaKnown RBP0.43□□□□□ -2.34
TARDBP-220ENST00000618606 FAM135AQ9P2D6 1515 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 MAP2P11137 1827 aaKnown RBP0.43□□□□□ -2.34
TARDBP-220ENST00000618606 PARP14Q460N5 1801 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 LRRC37A3O60309 1634 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 CTXND1A0A1B0GTU2 59 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 TMEM218A2RU14 115 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 CHKB-CPT1BH3BT56 60 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 HMGN4O00479 90 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 NMBP08949 121 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 RBP2P50120 134 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 CFAP126Q5VTH2 177 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 SPATA8Q6RVD6 105 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 MGST2Q99735 147 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 LENEPQ9Y5L5 61 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 SCAPERQ9BY12 1400 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 PATJQ8NI35 1801 aa0.43□□□□□ -2.34
TARDBP-220ENST00000618606 MYH9P35579 1960 aaKnown RBP0.43□□□□□ -2.34
TARDBP-220ENST00000618606 SIPA1L3O60292 1781 aaPredicted RBP0.42□□□□□ -2.34
TARDBP-220ENST00000618606 SMIM6P0DI80 62 aa0.42□□□□□ -2.34
TARDBP-220ENST00000618606 S100A10P60903 97 aa0.42□□□□□ -2.34
TARDBP-220ENST00000618606 DCDP81605 110 aaKnown RBP0.42□□□□□ -2.34
TARDBP-220ENST00000618606 Q5VV11 94 aa0.42□□□□□ -2.34
TARDBP-220ENST00000618606 SFTA2Q6UW10 78 aa0.42□□□□□ -2.34
TARDBP-220ENST00000618606 MYOZ3Q8TDC0 251 aa0.42□□□□□ -2.34
TARDBP-220ENST00000618606 NPVFQ9HCQ7 196 aa0.42□□□□□ -2.34
TARDBP-220ENST00000618606 DYNLRB1Q9NP97 96 aa0.42□□□□□ -2.34
TARDBP-220ENST00000618606 SCP2D1Q9UJQ7 156 aa0.42□□□□□ -2.34
TARDBP-220ENST00000618606 PXDNQ92626 1479 aa0.41□□□□□ -2.34
TARDBP-220ENST00000618606 PRDM2Q13029 1718 aa0.41□□□□□ -2.34
TARDBP-220ENST00000618606 NRKQ7Z2Y5 1582 aa0.41□□□□□ -2.34
TARDBP-220ENST00000618606 RIMS1Q86UR5 1692 aaKnown RBP0.41□□□□□ -2.34
TARDBP-220ENST00000618606 TRAV22A0A0B4J277 110 aa0.41□□□□□ -2.34
TARDBP-220ENST00000618606 IGLC7A0M8Q6 106 aa0.41□□□□□ -2.34
TARDBP-220ENST00000618606 NCMAPQ5T1S8 102 aa0.41□□□□□ -2.34
TARDBP-220ENST00000618606 SSBP3-AS1Q7Z2R9 100 aa0.41□□□□□ -2.34
TARDBP-220ENST00000618606 AMELXQ99217 191 aa0.41□□□□□ -2.34
TARDBP-220ENST00000618606 MANBALQ9NQG1 85 aa0.41□□□□□ -2.34
TARDBP-220ENST00000618606 SHROOM2Q13796 1616 aa0.41□□□□□ -2.34
TARDBP-220ENST00000618606 KIAA0100Q14667 2235 aaKnown RBP0.41□□□□□ -2.34
TARDBP-220ENST00000618606 MED13LQ71F56 2210 aa0.41□□□□□ -2.34
TARDBP-220ENST00000618606 IFT172Q9UG01 1749 aa0.41□□□□□ -2.34
TARDBP-220ENST00000618606 ZFYVE16Q7Z3T8 1539 aa0.4□□□□□ -2.35
TARDBP-220ENST00000618606 F5P12259 2224 aa0.4□□□□□ -2.35
TARDBP-220ENST00000618606 CC2D2AQ9P2K1 1620 aa0.4□□□□□ -2.35
TARDBP-220ENST00000618606 TRAV30A0A087WSZ9 112 aa0.4□□□□□ -2.35
TARDBP-220ENST00000618606 hADV29S1A0JD25 119 aa0.4□□□□□ -2.35
TARDBP-220ENST00000618606 C10orf142B7Z368 130 aa0.4□□□□□ -2.35
TARDBP-220ENST00000618606 TMEM262E9PQX1 116 aa0.4□□□□□ -2.35
TARDBP-220ENST00000618606 F8VRH5 84 aa0.4□□□□□ -2.35
TARDBP-220ENST00000618606 MPC2O95563 127 aa0.4□□□□□ -2.35
TARDBP-220ENST00000618606 ATP5EP56381 51 aaPredicted RBP0.4□□□□□ -2.35
TARDBP-220ENST00000618606 Q0VG73 95 aa0.4□□□□□ -2.35
TARDBP-220ENST00000618606 PROK2Q9HC23 129 aa0.4□□□□□ -2.35
TARDBP-220ENST00000618606 CDC42SE2Q9NRR3 84 aa0.4□□□□□ -2.35
TARDBP-220ENST00000618606 ZNF236Q9UL36 1845 aa0.4□□□□□ -2.35
TARDBP-220ENST00000618606 ABCC5O15440 1437 aa0.39□□□□□ -2.35
TARDBP-220ENST00000618606 MAPKBP1O60336 1514 aa0.39□□□□□ -2.35
TARDBP-220ENST00000618606 ARHGAP5Q13017 1502 aa0.39□□□□□ -2.35
TARDBP-220ENST00000618606 KRTAP2-3P0C7H8 128 aa0.39□□□□□ -2.35
TARDBP-220ENST00000618606 BAGE2Q86Y30 109 aa0.39□□□□□ -2.35
TARDBP-220ENST00000618606 UBE2DNLQ8IWF7 75 aa0.39□□□□□ -2.35
TARDBP-220ENST00000618606 KRTAP2-4Q9BYR9 128 aa0.39□□□□□ -2.35
TARDBP-220ENST00000618606 KRTAP2-1Q9BYU5 128 aa0.39□□□□□ -2.35
TARDBP-220ENST00000618606 LINC00472Q9H8W2 130 aa0.39□□□□□ -2.35
TARDBP-220ENST00000618606 LINC01558Q9Y6Z2 57 aa0.39□□□□□ -2.35
TARDBP-220ENST00000618606 KNTC1P50748 2209 aa0.39□□□□□ -2.35
TARDBP-220ENST00000618606 JMJD1CQ15652 2540 aa0.39□□□□□ -2.35
TARDBP-220ENST00000618606 SPHKAPQ2M3C7 1700 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 MYH8P13535 1937 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 CRYM-AS1A6NIL9 109 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 ZNF815PA8K554 130 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 GNGT2O14610 69 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 UQCR11O14957 56 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 SFT2D2O95562 160 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 PRH1P02810 166 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 MT-ATP8P03928 68 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms