RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 PIN1P1O15428 100 aa-0.4□□□□□ -2.47
ITGB5-213ENST00000608945 RPS28P62857 69 aaKnown RBP-0.4□□□□□ -2.47
ITGB5-213ENST00000608945 TFAMQ00059 246 aaKnown RBP-0.4□□□□□ -2.47
ITGB5-213ENST00000608945 CLLU1Q5K131 121 aa-0.4□□□□□ -2.47
ITGB5-213ENST00000608945 TMEM244Q5VVB8 128 aa-0.4□□□□□ -2.47
ITGB5-213ENST00000608945 BANF2Q9H503 90 aa-0.4□□□□□ -2.47
ITGB5-213ENST00000608945 DNAJC15Q9Y5T4 150 aa-0.4□□□□□ -2.47
ITGB5-213ENST00000608945 CADP27708 2225 aa-0.4□□□□□ -2.47
ITGB5-213ENST00000608945 DOPEY2Q9Y3R5 2298 aa-0.4□□□□□ -2.47
ITGB5-213ENST00000608945 ATG2AQ2TAZ0 1938 aa-0.4□□□□□ -2.47
ITGB5-213ENST00000608945 SPENQ96T58 3664 aaKnown RBP-0.41□□□□□ -2.47
ITGB5-213ENST00000608945 USP34Q70CQ2 3546 aa-0.41□□□□□ -2.47
ITGB5-213ENST00000608945 CMYA5Q8N3K9 4069 aa-0.41□□□□□ -2.48
ITGB5-213ENST00000608945 TRAV22A0A0B4J277 110 aa-0.41□□□□□ -2.48
ITGB5-213ENST00000608945 TRBV10-3A0A0K0K1G6 114 aa-0.41□□□□□ -2.48
ITGB5-213ENST00000608945 MT-ND4LP03901 98 aa-0.41□□□□□ -2.48
ITGB5-213ENST00000608945 SMIM6P0DI80 62 aa-0.41□□□□□ -2.48
ITGB5-213ENST00000608945 NPC2P61916 151 aa-0.41□□□□□ -2.48
ITGB5-213ENST00000608945 RBM3P98179 157 aaKnown RBP-0.41□□□□□ -2.48
ITGB5-213ENST00000608945 Q5VSD8 79 aa-0.41□□□□□ -2.48
ITGB5-213ENST00000608945 SPANXCQ9NY87 97 aa-0.41□□□□□ -2.48
ITGB5-213ENST00000608945 SPG11Q96JI7 2443 aa-0.41□□□□□ -2.48
ITGB5-213ENST00000608945 SSC5DA1L4H1 1573 aa-0.41□□□□□ -2.48
ITGB5-213ENST00000608945 DNAH8Q96JB1 4490 aa-0.41□□□□□ -2.48
ITGB5-213ENST00000608945 TRPM7Q96QT4 1865 aa-0.41□□□□□ -2.48
ITGB5-213ENST00000608945 WDR97A6NE52 1622 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 KIDINS220Q9ULH0 1771 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 PPRC1Q5VV67 1664 aaKnown RBP-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 AKAP9Q99996 3911 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 A6NIN4 97 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 TSTD3H0UI37 97 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 CMPK1P30085 196 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 EDDM3BP56851 147 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 PPP1R2P3Q6NXS1 205 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 Q8IZM0 81 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 SMPXQ9UHP9 88 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 AKAP6Q13023 2319 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 CSPG4Q6UVK1 2322 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 DNAH14Q0VDD8 3507 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 NHSL1Q5SYE7 1610 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 F5P12259 2224 aa-0.42□□□□□ -2.48
ITGB5-213ENST00000608945 CDH23Q9H251 3354 aa-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 PLXNA1Q9UIW2 1896 aa-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 MED13LQ71F56 2210 aa-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 FRYLO94915 3013 aa-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 TRAV36DV7A0A075B6V5 113 aa-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 M0R2P5 195 aa-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 SPAG11BQ08648 103 aa-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 RPL7L1Q6DKI1 246 aaKnown RBP-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 TCTE3Q8IZS6 198 aa-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 SPANXA1Q9NS26 97 aa-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 HSPB11Q9Y547 144 aa-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 SPCS1Q9Y6A9 102 aa-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 ATMQ13315 3056 aa-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 DNAH17Q9UFH2 4485 aa-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 VIRMAQ69YN4 1812 aaKnown RBP-0.43□□□□□ -2.48
ITGB5-213ENST00000608945 ANKRD31Q8N7Z5 1873 aa-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 SMG1Q96Q15 3661 aaKnown RBP-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 TRAV1-2A0A0B4J238 106 aa-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 A0A1B0GX51 115 aa-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 FAM92AA1XBS5 289 aa-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 APOC4-APOC2K7ER74 178 aa-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 NPFFO15130 113 aa-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 FABP1P07148 127 aa-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 SCTP09683 121 aa-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 S100A3P33764 101 aa-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 NCS1P62166 190 aa-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 SMIM15Q7Z3B0 74 aa-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 RPRMQ9NS64 109 aa-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 NDUFA12Q9UI09 145 aa-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 SPTBN1Q01082 2364 aaKnown RBP-0.44□□□□□ -2.48
ITGB5-213ENST00000608945 SPAG17Q6Q759 2223 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 WDFY3Q8IZQ1 3526 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 PTPRMP28827 1452 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 VPS13AQ96RL7 3174 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 G3V318 75 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 TNFSF15O95150 251 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 TNFP01375 233 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 IFNA17P01571 189 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 SPRR1AP35321 89 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 SPANXN1Q5VSR9 72 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 CTAGE3PQ8IX95 158 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 WFDC6Q9BQY6 131 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 DDA1Q9BW61 102 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 NPVFQ9HCQ7 196 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 SAR1AQ9NR31 198 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 HIGD1AQ9Y241 93 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 SIPA1L3O60292 1781 aaPredicted RBP-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 ABCA1O95477 2261 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 PKDREJQ9NTG1 2253 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 UTRNP46939 3433 aa-0.45□□□□□ -2.48
ITGB5-213ENST00000608945 LAMC1P11047 1609 aa-0.46□□□□□ -2.48
ITGB5-213ENST00000608945 BIVM-ERCC5R4GMW8 1640 aa-0.46□□□□□ -2.48
ITGB5-213ENST00000608945 NUP210Q8TEM1 1887 aaPredicted RBP-0.46□□□□□ -2.48
ITGB5-213ENST00000608945 DNAH10Q8IVF4 4471 aa-0.46□□□□□ -2.48
ITGB5-213ENST00000608945 SPTA1P02549 2419 aa-0.46□□□□□ -2.48
ITGB5-213ENST00000608945 GOLGA3Q08378 1498 aa-0.46□□□□□ -2.48
ITGB5-213ENST00000608945 RANBP2P49792 3224 aaKnown RBP-0.46□□□□□ -2.48
ITGB5-213ENST00000608945 TRBV20-1A0A075B6N2 111 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms