RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 AEBP2Q6ZN18 517 aaPredicted RBP23.66■■□□□ 1.38
ITGB5-213ENST00000608945 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
ITGB5-213ENST00000608945 POTEDQ86YR6 584 aa20.45■□□□□ 0.86
ITGB5-213ENST00000608945 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
ITGB5-213ENST00000608945 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
ITGB5-213ENST00000608945 FOXD1Q16676 465 aa19.14■□□□□ 0.65
ITGB5-213ENST00000608945 MSH5O43196 834 aa18.32■□□□□ 0.52
ITGB5-213ENST00000608945 PIAS4Q8N2W9 510 aaPredicted RBP17.46■□□□□ 0.39
ITGB5-213ENST00000608945 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
ITGB5-213ENST00000608945 ADRA2BP18089 450 aa16.66■□□□□ 0.26
ITGB5-213ENST00000608945 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
ITGB5-213ENST00000608945 PLPPR3Q6T4P5 718 aa16.02■□□□□ 0.16
ITGB5-213ENST00000608945 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
ITGB5-213ENST00000608945 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
ITGB5-213ENST00000608945 POTEHQ6S545 545 aa15.69■□□□□ 0.1
ITGB5-213ENST00000608945 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
ITGB5-213ENST00000608945 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
ITGB5-213ENST00000608945 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
ITGB5-213ENST00000608945 SCAF1Q9H7N4 1312 aaKnown RBP15.02■□□□□ -0
ITGB5-213ENST00000608945 HOXD11P31277 338 aaPredicted RBP14.73□□□□□ -0.05
ITGB5-213ENST00000608945 DNAJC5BQ9UF47 199 aa14.43□□□□□ -0.1
ITGB5-213ENST00000608945 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
ITGB5-213ENST00000608945 DSG3P32926 999 aa14.13□□□□□ -0.15
ITGB5-213ENST00000608945 SP7Q8TDD2 431 aaPredicted RBP14.03□□□□□ -0.16
ITGB5-213ENST00000608945 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
ITGB5-213ENST00000608945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.93□□□□□ -0.18
ITGB5-213ENST00000608945 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.18
ITGB5-213ENST00000608945 SPINK5Q9NQ38 1064 aaPredicted RBP13.86□□□□□ -0.19
ITGB5-213ENST00000608945 CAPN15O75808 1086 aa13.78□□□□□ -0.2
ITGB5-213ENST00000608945 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
ITGB5-213ENST00000608945 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
ITGB5-213ENST00000608945 PLSCR2Q9NRY7 297 aa13.48□□□□□ -0.25
ITGB5-213ENST00000608945 ABCB7O75027 752 aa13.41□□□□□ -0.26
ITGB5-213ENST00000608945 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
ITGB5-213ENST00000608945 TRHP20396 242 aaPredicted RBP13.23□□□□□ -0.29
ITGB5-213ENST00000608945 HAX1O00165 279 aa13.2□□□□□ -0.3
ITGB5-213ENST00000608945 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
ITGB5-213ENST00000608945 EVX2Q03828 476 aa13.12□□□□□ -0.31
ITGB5-213ENST00000608945 LHX8Q68G74 356 aa13.12□□□□□ -0.31
ITGB5-213ENST00000608945 ZNF219Q9P2Y4 722 aaPredicted RBP13.11□□□□□ -0.31
ITGB5-213ENST00000608945 FXR2P51116 673 aaKnown RBP eCLIP12.83□□□□□ -0.36
ITGB5-213ENST00000608945 APLP2Q06481 763 aa12.82□□□□□ -0.36
ITGB5-213ENST00000608945 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
ITGB5-213ENST00000608945 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
ITGB5-213ENST00000608945 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
ITGB5-213ENST00000608945 REM2Q8IYK8 340 aaPredicted RBP12.75□□□□□ -0.37
ITGB5-213ENST00000608945 PITPNM1O00562 1244 aa12.67□□□□□ -0.38
ITGB5-213ENST00000608945 GABBR2O75899 941 aa12.64□□□□□ -0.39
ITGB5-213ENST00000608945 SLC4A2P04920 1241 aa12.64□□□□□ -0.39
ITGB5-213ENST00000608945 POLA2Q14181 598 aa12.56□□□□□ -0.4
ITGB5-213ENST00000608945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
ITGB5-213ENST00000608945 HNRNPUL2Q1KMD3 747 aaKnown RBP12.51□□□□□ -0.41
ITGB5-213ENST00000608945 C19orf67A6NJJ6 358 aa12.48□□□□□ -0.41
ITGB5-213ENST00000608945 POTEIP0CG38 1075 aa12.46□□□□□ -0.41
ITGB5-213ENST00000608945 POTEMA6NI47 508 aa12.45□□□□□ -0.42
ITGB5-213ENST00000608945 SAMD1Q6SPF0 538 aaPredicted RBP12.43□□□□□ -0.42
ITGB5-213ENST00000608945 POTEGQ6S5H5 508 aa12.36□□□□□ -0.43
ITGB5-213ENST00000608945 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
ITGB5-213ENST00000608945 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
ITGB5-213ENST00000608945 OTUD5Q96G74 571 aa12.21□□□□□ -0.45
ITGB5-213ENST00000608945 PCDH10Q9P2E7 1040 aa12.19□□□□□ -0.46
ITGB5-213ENST00000608945 ZBTB12Q9Y330 459 aaPredicted RBP12.07□□□□□ -0.48
ITGB5-213ENST00000608945 POTEB2H3BUK9 544 aa12.02□□□□□ -0.49
ITGB5-213ENST00000608945 LCE2DQ5TA82 110 aaPredicted RBP11.94□□□□□ -0.5
ITGB5-213ENST00000608945 CHADLQ6NUI6 762 aa11.89□□□□□ -0.51
ITGB5-213ENST00000608945 DCBLD2Q96PD2 775 aa11.88□□□□□ -0.51
ITGB5-213ENST00000608945 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
ITGB5-213ENST00000608945 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
ITGB5-213ENST00000608945 ATF5Q9Y2D1 282 aaPredicted RBP11.79□□□□□ -0.52
ITGB5-213ENST00000608945 MYCNP04198 464 aaPredicted RBP11.78□□□□□ -0.52
ITGB5-213ENST00000608945 SPDYE1Q8NFV5 336 aaPredicted RBP11.78□□□□□ -0.52
ITGB5-213ENST00000608945 CLCN6P51797 869 aa11.76□□□□□ -0.53
ITGB5-213ENST00000608945 SPDYE2BA6NHP3 402 aa11.66□□□□□ -0.54
ITGB5-213ENST00000608945 SPDYE6P0CI01 402 aa11.66□□□□□ -0.54
ITGB5-213ENST00000608945 SPDYE2Q495Y8 402 aa11.66□□□□□ -0.54
ITGB5-213ENST00000608945 POTEJP0CG39 1038 aa11.63□□□□□ -0.55
ITGB5-213ENST00000608945 FAM163AQ96GL9 167 aaPredicted RBP11.62□□□□□ -0.55
ITGB5-213ENST00000608945 GALR2O43603 387 aaPredicted RBP11.57□□□□□ -0.56
ITGB5-213ENST00000608945 CDAN1Q8IWY9 1227 aa11.57□□□□□ -0.56
ITGB5-213ENST00000608945 ZNF579Q8NAF0 562 aaKnown RBP11.57□□□□□ -0.56
ITGB5-213ENST00000608945 PELP1Q8IZL8 1130 aaKnown RBP11.52□□□□□ -0.57
ITGB5-213ENST00000608945 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
ITGB5-213ENST00000608945 MMRN1Q13201 1228 aa11.48□□□□□ -0.57
ITGB5-213ENST00000608945 PRR29P0C7W0 189 aa11.43□□□□□ -0.58
ITGB5-213ENST00000608945 SSUH2Q9Y2M2 353 aa11.43□□□□□ -0.58
ITGB5-213ENST00000608945 ZRANB1Q9UGI0 708 aa11.39□□□□□ -0.59
ITGB5-213ENST00000608945 MAMSTRQ6ZN01 415 aa11.36□□□□□ -0.59
ITGB5-213ENST00000608945 METRNQ9UJH8 293 aa11.36□□□□□ -0.59
ITGB5-213ENST00000608945 SPNS2Q8IVW8 549 aa11.35□□□□□ -0.59
ITGB5-213ENST00000608945 KCNA4P22459 653 aa11.3□□□□□ -0.6
ITGB5-213ENST00000608945 ZNF692Q9BU19 519 aaPredicted RBP11.28□□□□□ -0.6
ITGB5-213ENST00000608945 SCUBE2Q9NQ36 999 aa11.24□□□□□ -0.61
ITGB5-213ENST00000608945 C7P10643 843 aa11.21□□□□□ -0.61
ITGB5-213ENST00000608945 SLC39A7Q92504 469 aa11.21□□□□□ -0.61
ITGB5-213ENST00000608945 ASTLQ6HA08 431 aaPredicted RBP11.2□□□□□ -0.62
ITGB5-213ENST00000608945 PHF12Q96QT6 1004 aa11.19□□□□□ -0.62
ITGB5-213ENST00000608945 FBLN2P98095 1184 aa11.18□□□□□ -0.62
ITGB5-213ENST00000608945 MKRN4PQ13434 485 aaPredicted RBP11.15□□□□□ -0.62
ITGB5-213ENST00000608945 ATMINO43313 823 aaPredicted RBP11.14□□□□□ -0.63
ITGB5-213ENST00000608945 PABPN1Q86U42 306 aaKnown RBP eCLIP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms