RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SHROOM2Q13796 1616 aa0.9□□□□□ -2.26
UBR1-205ENST00000564540 CC2D2AQ9P2K1 1620 aa0.9□□□□□ -2.26
UBR1-205ENST00000564540 A0A096LNT2 108 aa0.9□□□□□ -2.27
UBR1-205ENST00000564540 K7EIL1 84 aa0.9□□□□□ -2.27
UBR1-205ENST00000564540 MT-ATP8P03928 68 aa0.9□□□□□ -2.27
UBR1-205ENST00000564540 GNG11P61952 73 aa0.9□□□□□ -2.27
UBR1-205ENST00000564540 FAM213BQ8TBF2 198 aa0.9□□□□□ -2.27
UBR1-205ENST00000564540 WFDC6Q9BQY6 131 aa0.9□□□□□ -2.27
UBR1-205ENST00000564540 ABCC5O15440 1437 aa0.89□□□□□ -2.27
UBR1-205ENST00000564540 ARHGAP5Q13017 1502 aa0.89□□□□□ -2.27
UBR1-205ENST00000564540 PPP1R17O96001 155 aa0.89□□□□□ -2.27
UBR1-205ENST00000564540 PXDNQ92626 1479 aa0.88□□□□□ -2.27
UBR1-205ENST00000564540 TRGV1A0A0A0MS02 117 aa0.88□□□□□ -2.27
UBR1-205ENST00000564540 hADV29S1A0JD25 119 aa0.88□□□□□ -2.27
UBR1-205ENST00000564540 RPL37P61927 97 aaKnown RBP0.88□□□□□ -2.27
UBR1-205ENST00000564540 SPINK13Q1W4C9 94 aa0.88□□□□□ -2.27
UBR1-205ENST00000564540 COL5A1-AS1Q5SY13 56 aa0.88□□□□□ -2.27
UBR1-205ENST00000564540 Q5VV11 94 aa0.88□□□□□ -2.27
UBR1-205ENST00000564540 MGST2Q99735 147 aa0.88□□□□□ -2.27
UBR1-205ENST00000564540 NDUFA4L2Q9NRX3 87 aa0.88□□□□□ -2.27
UBR1-205ENST00000564540 LENEPQ9Y5L5 61 aa0.88□□□□□ -2.27
UBR1-205ENST00000564540 LRRC37A3O60309 1634 aa0.88□□□□□ -2.27
UBR1-205ENST00000564540 ZNF609O15014 1411 aa0.88□□□□□ -2.27
UBR1-205ENST00000564540 DOCK2Q92608 1830 aa0.87□□□□□ -2.27
UBR1-205ENST00000564540 GOLGA3Q08378 1498 aa0.87□□□□□ -2.27
UBR1-205ENST00000564540 CNTRLQ7Z7A1 2325 aa0.87□□□□□ -2.27
UBR1-205ENST00000564540 GNGT2O14610 69 aa0.87□□□□□ -2.27
UBR1-205ENST00000564540 CCL18P55774 89 aa0.87□□□□□ -2.27
UBR1-205ENST00000564540 UBA52P62987 128 aaKnown RBP0.87□□□□□ -2.27
UBR1-205ENST00000564540 SPAG11BQ08648 103 aa0.87□□□□□ -2.27
UBR1-205ENST00000564540 SPAG11AQ6PDA7 123 aa0.87□□□□□ -2.27
UBR1-205ENST00000564540 DPY30Q9C005 99 aa0.87□□□□□ -2.27
UBR1-205ENST00000564540 SCP2D1Q9UJQ7 156 aa0.87□□□□□ -2.27
UBR1-205ENST00000564540 PSME4Q14997 1843 aa0.87□□□□□ -2.27
UBR1-205ENST00000564540 LAMA4Q16363 1823 aa0.87□□□□□ -2.27
UBR1-205ENST00000564540 MRC1P22897 1456 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 LOC285556D6RIA3 1793 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 SIPA1L3O60292 1781 aaPredicted RBP0.86□□□□□ -2.27
UBR1-205ENST00000564540 ZMYM4Q5VZL5 1548 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 ZNF469Q96JG9 3925 aaPredicted RBP0.86□□□□□ -2.27
UBR1-205ENST00000564540 TRAV22A0A0B4J277 110 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 NAP1L6A6NFF2 107 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 CHKB-CPT1BH3BT56 60 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 SPINT3P49223 89 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 Q0VG73 95 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 FAM167A-AS1Q96KT0 104 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 DYNLRB1Q9NP97 96 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 R4GMQ9 66 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 MED13LQ71F56 2210 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 PRDM2Q13029 1718 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 ABCA3Q99758 1704 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 TEX14Q8IWB6 1497 aa0.86□□□□□ -2.27
UBR1-205ENST00000564540 TET3O43151 1660 aa0.85□□□□□ -2.27
UBR1-205ENST00000564540 MAP2P11137 1827 aaKnown RBP0.85□□□□□ -2.27
UBR1-205ENST00000564540 GVQW2A0A096LPI5 108 aaPredicted RBP0.85□□□□□ -2.27
UBR1-205ENST00000564540 M0R135 149 aa0.85□□□□□ -2.27
UBR1-205ENST00000564540 HMGN4O00479 90 aa0.85□□□□□ -2.27
UBR1-205ENST00000564540 ROS1P08922 2347 aa0.85□□□□□ -2.27
UBR1-205ENST00000564540 ACYP2P14621 99 aa0.85□□□□□ -2.27
UBR1-205ENST00000564540 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.85□□□□□ -2.27
UBR1-205ENST00000564540 VMO1Q7Z5L0 202 aa0.85□□□□□ -2.27
UBR1-205ENST00000564540 MANBALQ9NQG1 85 aa0.85□□□□□ -2.27
UBR1-205ENST00000564540 CDC42SE2Q9NRR3 84 aa0.85□□□□□ -2.27
UBR1-205ENST00000564540 DOCK11Q5JSL3 2073 aa0.85□□□□□ -2.27
UBR1-205ENST00000564540 ABCA1O95477 2261 aa0.84□□□□□ -2.27
UBR1-205ENST00000564540 AKAP12Q02952 1782 aa0.84□□□□□ -2.27
UBR1-205ENST00000564540 TRAV1-2A0A0B4J238 106 aa0.84□□□□□ -2.27
UBR1-205ENST00000564540 LINC00032P0C843 101 aa0.84□□□□□ -2.27
UBR1-205ENST00000564540 KRTDAPP60985 99 aa0.84□□□□□ -2.27
UBR1-205ENST00000564540 UBE2D3P61077 147 aa0.84□□□□□ -2.27
UBR1-205ENST00000564540 UBE2D2P62837 147 aa0.84□□□□□ -2.27
UBR1-205ENST00000564540 SEC11AP67812 179 aa0.84□□□□□ -2.27
UBR1-205ENST00000564540 BAGE3Q86Y29 109 aa0.84□□□□□ -2.27
UBR1-205ENST00000564540 AP4S1Q9Y587 144 aa0.84□□□□□ -2.27
UBR1-205ENST00000564540 V9GYH0 126 aa0.84□□□□□ -2.27
UBR1-205ENST00000564540 TANC1Q9C0D5 1861 aa0.84□□□□□ -2.28
UBR1-205ENST00000564540 ANKRD36BQ8N2N9 1353 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 SSC5DA1L4H1 1573 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 IGLC7A0M8Q6 106 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 CRYM-AS1A6NIL9 109 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 TMEM14DPA8MWL7 114 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 C10orf142B7Z368 130 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 ZNF137PP52743 207 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 GNG2P59768 71 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 SFTA2Q6UW10 78 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 Q6ZRX8 168 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 SMIM11BQ8TCY0 68 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 AMELXQ99217 191 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 PMCHL2Q9BQD1 86 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 VAMP8Q9BV40 100 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 BPESC1Q9GZL8 116 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 SHANK2Q9UPX8 1470 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 ANKRD26Q9UPS8 1709 aa0.83□□□□□ -2.28
UBR1-205ENST00000564540 TOPAZ1Q8N9V7 1692 aa0.82□□□□□ -2.28
UBR1-205ENST00000564540 ZDBF2Q9HCK1 2354 aa0.82□□□□□ -2.28
UBR1-205ENST00000564540 GAPVD1Q14C86 1478 aa0.82□□□□□ -2.28
UBR1-205ENST00000564540 CHD1O14646 1710 aa0.82□□□□□ -2.28
UBR1-205ENST00000564540 CTXND1A0A1B0GTU2 59 aa0.82□□□□□ -2.28
UBR1-205ENST00000564540 F2Z2F3 143 aa0.82□□□□□ -2.28
UBR1-205ENST00000564540 F8VRH5 84 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 953.4 ms