RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 SERF1AO75920 110 aa8.51□□□□□ -1.05
HMG20B-211ENST00000486028 OR10J3Q5JRS4 329 aa8.51□□□□□ -1.05
HMG20B-211ENST00000486028 AP1S3Q96PC3 154 aa8.51□□□□□ -1.05
HMG20B-211ENST00000486028 GTSF1LQ9H1H1 148 aa8.51□□□□□ -1.05
HMG20B-211ENST00000486028 V9GYV3 84 aa8.51□□□□□ -1.05
HMG20B-211ENST00000486028 EPPK1P58107 5090 aaKnown RBP8.51□□□□□ -1.05
HMG20B-211ENST00000486028 PRSS47A8MTI9 375 aa8.5□□□□□ -1.05
HMG20B-211ENST00000486028 F5H697 171 aa8.5□□□□□ -1.05
HMG20B-211ENST00000486028 DLEU1O43261 78 aa8.5□□□□□ -1.05
HMG20B-211ENST00000486028 ZNF25P17030 456 aaPredicted RBP8.5□□□□□ -1.05
HMG20B-211ENST00000486028 ZNF56Q15929 161 aa8.5□□□□□ -1.05
HMG20B-211ENST00000486028 LELP1Q5T871 98 aa8.5□□□□□ -1.05
HMG20B-211ENST00000486028 LYZL1Q6UWQ5 148 aa8.5□□□□□ -1.05
HMG20B-211ENST00000486028 FAM231DQ6ZW35 169 aa8.5□□□□□ -1.05
HMG20B-211ENST00000486028 BAGE3Q86Y29 109 aa8.5□□□□□ -1.05
HMG20B-211ENST00000486028 VAMP8Q9BV40 100 aa8.5□□□□□ -1.05
HMG20B-211ENST00000486028 DNAH2Q9P225 4427 aa8.5□□□□□ -1.05
HMG20B-211ENST00000486028 Q9UF83 564 aa8.5□□□□□ -1.05
HMG20B-211ENST00000486028 FRAS1Q86XX4 4008 aa8.5□□□□□ -1.05
HMG20B-211ENST00000486028 A8MWL6 223 aa8.49□□□□□ -1.05
HMG20B-211ENST00000486028 K7EP13 123 aa8.49□□□□□ -1.05
HMG20B-211ENST00000486028 LINC00614P0C842 121 aa8.49□□□□□ -1.05
HMG20B-211ENST00000486028 LINC00694P0DN24 101 aa8.49□□□□□ -1.05
HMG20B-211ENST00000486028 EVI2AP22794 236 aa8.49□□□□□ -1.05
HMG20B-211ENST00000486028 RPL36AP83881 106 aaKnown RBP8.49□□□□□ -1.05
HMG20B-211ENST00000486028 TMEM136Q6ZRR5 245 aa8.49□□□□□ -1.05
HMG20B-211ENST00000486028 WFDC10BQ8IUB3 73 aa8.49□□□□□ -1.05
HMG20B-211ENST00000486028 Q8N976 141 aa8.49□□□□□ -1.05
HMG20B-211ENST00000486028 RPL36ALQ969Q0 106 aaKnown RBP8.49□□□□□ -1.05
HMG20B-211ENST00000486028 KRTAP1-5Q9BYS1 174 aa8.49□□□□□ -1.05
HMG20B-211ENST00000486028 MSRB1Q9NZV6 116 aa8.49□□□□□ -1.05
HMG20B-211ENST00000486028 DNAH17Q9UFH2 4485 aa8.49□□□□□ -1.05
HMG20B-211ENST00000486028 TRBV7-3A0A075B6L6 115 aa8.48□□□□□ -1.05
HMG20B-211ENST00000486028 IGHV3-38A0A0C4DH36 116 aa8.48□□□□□ -1.05
HMG20B-211ENST00000486028 DNAH10OSP0CZ25 163 aa8.48□□□□□ -1.05
HMG20B-211ENST00000486028 NTF3P20783 257 aa8.48□□□□□ -1.05
HMG20B-211ENST00000486028 G0S2P27469 103 aa8.48□□□□□ -1.05
HMG20B-211ENST00000486028 CTRLP40313 264 aa8.48□□□□□ -1.05
HMG20B-211ENST00000486028 KIF25-AS1Q9Y6Z4 181 aa8.48□□□□□ -1.05
HMG20B-211ENST00000486028 SMIM27A0A1W2PRY6 76 aa8.47□□□□□ -1.05
HMG20B-211ENST00000486028 TWIST1Q15672 202 aa8.47□□□□□ -1.05
HMG20B-211ENST00000486028 RASL11AQ6T310 242 aa8.47□□□□□ -1.05
HMG20B-211ENST00000486028 HLA-DQA1P01909 254 aa8.46□□□□□ -1.06
HMG20B-211ENST00000486028 MGPP08493 103 aa8.46□□□□□ -1.06
HMG20B-211ENST00000486028 LINC00315P59091 139 aa8.46□□□□□ -1.06
HMG20B-211ENST00000486028 LINC01556Q5JQF7 62 aa8.46□□□□□ -1.06
HMG20B-211ENST00000486028 COL5A1-AS1Q5SY13 56 aa8.46□□□□□ -1.06
HMG20B-211ENST00000486028 C10orf126Q8N4M7 172 aa8.46□□□□□ -1.06
HMG20B-211ENST00000486028 GTSF1Q8WW33 167 aa8.46□□□□□ -1.06
HMG20B-211ENST00000486028 CNFNQ9BYD5 112 aa8.46□□□□□ -1.06
HMG20B-211ENST00000486028 H7C1H1 209 aa8.45□□□□□ -1.06
HMG20B-211ENST00000486028 MALP21145 153 aa8.45□□□□□ -1.06
HMG20B-211ENST00000486028 UBE2D3P61077 147 aa8.45□□□□□ -1.06
HMG20B-211ENST00000486028 UBE2D2P62837 147 aa8.45□□□□□ -1.06
HMG20B-211ENST00000486028 CFAP161Q6P656 301 aa8.45□□□□□ -1.06
HMG20B-211ENST00000486028 NFE4Q86UQ8 179 aa8.45□□□□□ -1.06
HMG20B-211ENST00000486028 BORCS7Q96B45 105 aa8.45□□□□□ -1.06
HMG20B-211ENST00000486028 PGLYRP4Q96LB8 373 aa8.45□□□□□ -1.06
HMG20B-211ENST00000486028 DPH3P1Q9H4G8 78 aa8.45□□□□□ -1.06
HMG20B-211ENST00000486028 UQCR10Q9UDW1 63 aa8.45□□□□□ -1.06
HMG20B-211ENST00000486028 NAT8BQ9UHF3 227 aa8.45□□□□□ -1.06
HMG20B-211ENST00000486028 PAM16Q9Y3D7 125 aa8.45□□□□□ -1.06
HMG20B-211ENST00000486028 FAT2Q9NYQ8 4349 aa8.45□□□□□ -1.06
HMG20B-211ENST00000486028 FOXA3P55318 350 aaPredicted RBP8.44□□□□□ -1.06
HMG20B-211ENST00000486028 KRTDAPP60985 99 aa8.44□□□□□ -1.06
HMG20B-211ENST00000486028 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
HMG20B-211ENST00000486028 SMIM15Q7Z3B0 74 aa8.44□□□□□ -1.06
HMG20B-211ENST00000486028 NEXN-AS1Q8NBZ9 246 aa8.44□□□□□ -1.06
HMG20B-211ENST00000486028 TSKUQ8WUA8 353 aa8.44□□□□□ -1.06
HMG20B-211ENST00000486028 GFRA4Q9GZZ7 299 aa8.44□□□□□ -1.06
HMG20B-211ENST00000486028 TNFRSF18Q9Y5U5 241 aa8.44□□□□□ -1.06
HMG20B-211ENST00000486028 A0A1B0GVY2 172 aa8.43□□□□□ -1.06
HMG20B-211ENST00000486028 C20orf202A1L168 122 aa8.43□□□□□ -1.06
HMG20B-211ENST00000486028 FAM231BA6NCW3 169 aa8.43□□□□□ -1.06
HMG20B-211ENST00000486028 M0QY20 66 aa8.43□□□□□ -1.06
HMG20B-211ENST00000486028 APCSP02743 223 aa8.43□□□□□ -1.06
HMG20B-211ENST00000486028 AMTP48728 403 aa8.43□□□□□ -1.06
HMG20B-211ENST00000486028 SUMO4Q6EEV6 95 aa8.43□□□□□ -1.06
HMG20B-211ENST00000486028 NIT1Q86X76 327 aa8.43□□□□□ -1.06
HMG20B-211ENST00000486028 DNAJC30Q96LL9 226 aa8.43□□□□□ -1.06
HMG20B-211ENST00000486028 CBY1Q9Y3M2 126 aa8.43□□□□□ -1.06
HMG20B-211ENST00000486028 BIRC6Q9NR09 4857 aa8.43□□□□□ -1.06
HMG20B-211ENST00000486028 HECTD4Q9Y4D8 3996 aa8.42□□□□□ -1.06
HMG20B-211ENST00000486028 IGHV3-30P01768 117 aa8.42□□□□□ -1.06
HMG20B-211ENST00000486028 IGHV3-33P01772 117 aa8.42□□□□□ -1.06
HMG20B-211ENST00000486028 IGHV3-30-3P0DP02 117 aa8.42□□□□□ -1.06
HMG20B-211ENST00000486028 IGHV3-30-5P0DP03 117 aa8.42□□□□□ -1.06
HMG20B-211ENST00000486028 PMCHL1Q16048 86 aa8.42□□□□□ -1.06
HMG20B-211ENST00000486028 SPATA45Q537H7 98 aa8.42□□□□□ -1.06
HMG20B-211ENST00000486028 DAZ4Q86SG3 579 aaKnown RBP8.42□□□□□ -1.06
HMG20B-211ENST00000486028 DAZ3Q9NR90 486 aaKnown RBP8.42□□□□□ -1.06
HMG20B-211ENST00000486028 A0A1B0GUT8 65 aa8.41□□□□□ -1.06
HMG20B-211ENST00000486028 HIGD1CA8MV81 97 aa8.41□□□□□ -1.06
HMG20B-211ENST00000486028 IBA57-AS1B1ANH7 110 aa8.41□□□□□ -1.06
HMG20B-211ENST00000486028 C3orf79P0CE67 100 aa8.41□□□□□ -1.06
HMG20B-211ENST00000486028 IGLC3P0DOY3 106 aa8.41□□□□□ -1.06
HMG20B-211ENST00000486028 TMEM97Q5BJF2 176 aa8.41□□□□□ -1.06
HMG20B-211ENST00000486028 TRBV6-8A0A0A6YYG3 113 aa8.4□□□□□ -1.06
HMG20B-211ENST00000486028 NPSP0C0P6 89 aa8.4□□□□□ -1.06
HMG20B-211ENST00000486028 PMCHP20382 165 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms