RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 A630076J17RikJ3QQ32 107 aa9.46□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Hoxb2P0C1T1 354 aa9.46□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Gm7489Q3UT34 171 aa9.46□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Dhrs13Q5SS80 376 aa9.46□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 SriQ6P069 198 aa9.46□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Olfr1356Q7TQU8 320 aa9.46□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Olfr1195Q8VG21 308 aa9.46□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 TecrQ9CY27 308 aa9.46□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 V1ra8Q9EQ48 279 aa9.46□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Col5a1O88207 1838 aa9.46□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Gm20458E9PXJ7 78 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Olfr466E9Q2B9 308 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Smad7O35253 426 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Lcn2P11672 200 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Phxr2P15972 65 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 BsgP18572 389 aaKnown RBP9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Mpv17P19258 176 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Ypel3P61237 119 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 StumQ0VBF8 141 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Cdv3Q4VAA2 281 aaKnown RBP9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 AgerQ62151 402 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Elovl5Q8BHI7 299 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Lrrc25Q8K1T1 297 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Spsb4Q8R5B6 273 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Prr15Q9D1T5 122 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Znf22Q9ERU3 237 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Pla2g2eQ9QUL3 142 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Timm10bQ9WV96 100 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Gm27027S4R1M6 97 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 P01796 113 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 P01797 113 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 P01799 113 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Tnfrsf1aP25118 454 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Defa-rs12P50716 91 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Zglp1Q1WG82 266 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Slc25a48Q8BW66 306 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Bpifa5Q9CQX3 270 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Ssbp3Q9D032 388 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Hrct1Q9D6B9 109 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Ighv8-9A0A0G2JET1 119 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Trav12d-1A0N8R0 115 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Dcaf10A2AKB9 566 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 P01655 112 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Ifna5P07349 189 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 MymxQ2Q5T5 84 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Asphd1Q2TA57 360 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Ripply2Q2WG76 128 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Q3U1D9 316 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Mrps18cQ8R2L5 143 aaKnown RBP9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 TctaQ8VEA7 122 aa9.45□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Trbv13-3A0A0B4J1H2 113 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Trav13n-4A0A0G2JG01 110 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Spint5J3KMK8 105 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Hoxa3P02831 443 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Ccl1P10146 92 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Dnajc30P59041 219 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Rpl32P62911 135 aaKnown RBP9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Shisal1Q0VBP7 198 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Arl14eplQ3UKZ7 152 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 BB014433Q8C5R5 389 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 TprkbQ8QZZ7 175 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Olfr736Q8VFT6 312 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Prb1Q91X93 504 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Gng12Q9DAS9 72 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Cml1Q9JIZ0 222 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Cryba4Q9JJV0 196 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 CadB2RQC6 2225 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Gvin1Q80SU7 2427 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Igkv14-111A0A140T8P9 117 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Lgals9O08573 353 aaKnown RBP9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 AvpP35455 168 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Fam3dP97805 223 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Plk3Q60806 631 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 BC106179Q8C9L1 186 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 HpxQ91X72 460 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Vmn1r61W4VSP5 300 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Akap9Q70FJ1 3797 aa9.44□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Gm4565A0A140LJ87 301 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Vmn1r224E9PWK2 298 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Gm6176J3QK59 301 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Defa13P50711 93 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Gm4567Q3UTA8 301 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Mob1bQ8BPB0 216 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Ercc8Q8CFD5 397 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Mgst1Q91VS7 155 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Ccl28Q9JIL2 130 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Col6a6Q8C6K9 2265 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Efnb3O35393 340 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Edn1P22387 202 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Atp5g2P56383 146 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Gm10384Q3UQ87 92 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 MavsQ8VCF0 503 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Olfr1262Q8VGN2 304 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Olfr577Q8VH11 312 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Rab29Q91YQ1 204 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 DysfQ9ESD7 2090 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Zfhx3Q61329 3726 aa9.43□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Gm12886B1AZM5 119 aa9.42□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 Wdr86D3Z757 380 aa9.42□□□□□ -0.9
Prpf40b-208ENSMUST00000136980 BC048562Q80ZQ7 204 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 102.8 ms